data_5NUB
#
_model_server_result.job_id            g3LzNe9Pu4WQCrY7Uo4l1Q 
_model_server_result.datetime_utc      '2024-11-17 13:29:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nub 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    5NUB 
#
_exptl.entry_id    5NUB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              200.318 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LAURIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5NUB 
_cell.length_a            102.61 
_cell.length_b            102.61 
_cell.length_c            73.134 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NUB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 A SG CYS 70 A CYS 70 1_555 A SG CYS 174 A CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 A SG CYS 120 A CYS 120 1_555 A SG CYS 129 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
#
_chem_comp.formula           'C12 H24 O2' 
_chem_comp.formula_weight    200.318 
_chem_comp.id                DAO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LAURIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 DAO doub 83 n n 
O2 C1 DAO sing 84 n n 
O2 HO2 DAO sing 85 n n 
C1 C2 DAO sing 86 n n 
C2 C3 DAO sing 87 n n 
C2 H21 DAO sing 88 n n 
C2 H22 DAO sing 89 n n 
C3 C4 DAO sing 90 n n 
C3 H31 DAO sing 91 n n 
C3 H32 DAO sing 92 n n 
C4 C5 DAO sing 93 n n 
C4 H41 DAO sing 94 n n 
C4 H42 DAO sing 95 n n 
C5 C6 DAO sing 96 n n 
C5 H51 DAO sing 97 n n 
C5 H52 DAO sing 98 n n 
C6 C7 DAO sing 99 n n 
C6 H61 DAO sing 100 n n 
C6 H62 DAO sing 101 n n 
C7 C8 DAO sing 102 n n 
C7 H71 DAO sing 103 n n 
C7 H72 DAO sing 104 n n 
C8 C9 DAO sing 105 n n 
C8 H81 DAO sing 106 n n 
C8 H82 DAO sing 107 n n 
C9 C10 DAO sing 108 n n 
C9 H91 DAO sing 109 n n 
C9 H92 DAO sing 110 n n 
C10 C11 DAO sing 111 n n 
C10 H101 DAO sing 112 n n 
C10 H102 DAO sing 113 n n 
C11 C12 DAO sing 114 n n 
C11 H111 DAO sing 115 n n 
C11 H112 DAO sing 116 n n 
C12 H121 DAO sing 117 n n 
C12 H122 DAO sing 118 n n 
C12 H123 DAO sing 119 n n 
#
_atom_sites.entry_id                     5NUB 
_atom_sites.fract_transf_matrix[1][1]    0.009746 
_atom_sites.fract_transf_matrix[1][2]    0.005627 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011253 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013674 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DAO A 1 201 183 DAO DAO . 
C 3 CL A 1 202 193 CL CL . 
D 3 CL A 1 203 194 CL CL . 
E 4 HOH A 1 301 288 HOH HOH . 
E 4 HOH A 2 302 277 HOH HOH . 
E 4 HOH A 3 303 294 HOH HOH . 
E 4 HOH A 4 304 308 HOH HOH . 
E 4 HOH A 5 305 289 HOH HOH . 
E 4 HOH A 6 306 302 HOH HOH . 
E 4 HOH A 7 307 218 HOH HOH . 
E 4 HOH A 8 308 225 HOH HOH . 
E 4 HOH A 9 309 250 HOH HOH . 
E 4 HOH A 10 310 255 HOH HOH . 
E 4 HOH A 11 311 266 HOH HOH . 
E 4 HOH A 12 312 284 HOH HOH . 
E 4 HOH A 13 313 271 HOH HOH . 
E 4 HOH A 14 314 241 HOH HOH . 
E 4 HOH A 15 315 282 HOH HOH . 
E 4 HOH A 16 316 254 HOH HOH . 
E 4 HOH A 17 317 227 HOH HOH . 
E 4 HOH A 18 318 223 HOH HOH . 
E 4 HOH A 19 319 244 HOH HOH . 
E 4 HOH A 20 320 305 HOH HOH . 
E 4 HOH A 21 321 234 HOH HOH . 
E 4 HOH A 22 322 279 HOH HOH . 
E 4 HOH A 23 323 248 HOH HOH . 
E 4 HOH A 24 324 261 HOH HOH . 
E 4 HOH A 25 325 215 HOH HOH . 
E 4 HOH A 26 326 301 HOH HOH . 
E 4 HOH A 27 327 287 HOH HOH . 
E 4 HOH A 28 328 262 HOH HOH . 
E 4 HOH A 29 329 232 HOH HOH . 
E 4 HOH A 30 330 239 HOH HOH . 
E 4 HOH A 31 331 242 HOH HOH . 
E 4 HOH A 32 332 278 HOH HOH . 
E 4 HOH A 33 333 306 HOH HOH . 
E 4 HOH A 34 334 296 HOH HOH . 
E 4 HOH A 35 335 217 HOH HOH . 
E 4 HOH A 36 336 286 HOH HOH . 
E 4 HOH A 37 337 206 HOH HOH . 
E 4 HOH A 38 338 230 HOH HOH . 
E 4 HOH A 39 339 221 HOH HOH . 
E 4 HOH A 40 340 258 HOH HOH . 
E 4 HOH A 41 341 297 HOH HOH . 
E 4 HOH A 42 342 243 HOH HOH . 
E 4 HOH A 43 343 210 HOH HOH . 
E 4 HOH A 44 344 201 HOH HOH . 
E 4 HOH A 45 345 253 HOH HOH . 
E 4 HOH A 46 346 245 HOH HOH . 
E 4 HOH A 47 347 246 HOH HOH . 
E 4 HOH A 48 348 235 HOH HOH . 
E 4 HOH A 49 349 240 HOH HOH . 
E 4 HOH A 50 350 265 HOH HOH . 
E 4 HOH A 51 351 280 HOH HOH . 
E 4 HOH A 52 352 252 HOH HOH . 
E 4 HOH A 53 353 238 HOH HOH . 
E 4 HOH A 54 354 263 HOH HOH . 
E 4 HOH A 55 355 202 HOH HOH . 
E 4 HOH A 56 356 237 HOH HOH . 
E 4 HOH A 57 357 281 HOH HOH . 
E 4 HOH A 58 358 203 HOH HOH . 
E 4 HOH A 59 359 205 HOH HOH . 
E 4 HOH A 60 360 283 HOH HOH . 
E 4 HOH A 61 361 220 HOH HOH . 
E 4 HOH A 62 362 304 HOH HOH . 
E 4 HOH A 63 363 264 HOH HOH . 
E 4 HOH A 64 364 233 HOH HOH . 
E 4 HOH A 65 365 236 HOH HOH . 
E 4 HOH A 66 366 256 HOH HOH . 
E 4 HOH A 67 367 226 HOH HOH . 
E 4 HOH A 68 368 209 HOH HOH . 
E 4 HOH A 69 369 216 HOH HOH . 
E 4 HOH A 70 370 231 HOH HOH . 
E 4 HOH A 71 371 260 HOH HOH . 
E 4 HOH A 72 372 247 HOH HOH . 
E 4 HOH A 73 373 214 HOH HOH . 
E 4 HOH A 74 374 251 HOH HOH . 
E 4 HOH A 75 375 257 HOH HOH . 
E 4 HOH A 76 376 224 HOH HOH . 
E 4 HOH A 77 377 272 HOH HOH . 
E 4 HOH A 78 378 275 HOH HOH . 
E 4 HOH A 79 379 228 HOH HOH . 
E 4 HOH A 80 380 291 HOH HOH . 
E 4 HOH A 81 381 213 HOH HOH . 
E 4 HOH A 82 382 212 HOH HOH . 
E 4 HOH A 83 383 207 HOH HOH . 
E 4 HOH A 84 384 208 HOH HOH . 
E 4 HOH A 85 385 204 HOH HOH . 
E 4 HOH A 86 386 303 HOH HOH . 
E 4 HOH A 87 387 290 HOH HOH . 
E 4 HOH A 88 388 300 HOH HOH . 
E 4 HOH A 89 389 222 HOH HOH . 
E 4 HOH A 90 390 229 HOH HOH . 
E 4 HOH A 91 391 270 HOH HOH . 
E 4 HOH A 92 392 249 HOH HOH . 
E 4 HOH A 93 393 274 HOH HOH . 
E 4 HOH A 94 394 307 HOH HOH . 
E 4 HOH A 95 395 293 HOH HOH . 
E 4 HOH A 96 396 298 HOH HOH . 
E 4 HOH A 97 397 299 HOH HOH . 
E 4 HOH A 98 398 276 HOH HOH . 
E 4 HOH A 99 399 267 HOH HOH . 
E 4 HOH A 100 400 269 HOH HOH . 
E 4 HOH A 101 401 295 HOH HOH . 
E 4 HOH A 102 402 285 HOH HOH . 
E 4 HOH A 103 403 268 HOH HOH . 
E 4 HOH A 104 404 273 HOH HOH . 
E 4 HOH A 105 405 211 HOH HOH . 
E 4 HOH A 106 406 292 HOH HOH . 
E 4 HOH A 107 407 259 HOH HOH . 
E 4 HOH A 108 408 309 HOH HOH . 
E 4 HOH A 109 409 219 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 DAO . . . B 2 35.209 24.593 -3.469 1 37.2 ? O1 DAO 201 A 1 
HETATM 2 O O2 DAO . . . B 2 34.631 26.647 -2.858 1 35.52 ? O2 DAO 201 A 1 
HETATM 3 C C1 DAO . . . B 2 34.884 25.444 -2.617 1 34.39 ? C1 DAO 201 A 1 
HETATM 4 C C2 DAO . . . B 2 34.814 25.006 -1.163 1 41.15 ? C2 DAO 201 A 1 
HETATM 5 C C3 DAO . . . B 2 35.191 23.527 -1.101 1 54 ? C3 DAO 201 A 1 
HETATM 6 C C4 DAO . . . B 2 36.673 23.421 -1.455 1 58.68 ? C4 DAO 201 A 1 
HETATM 7 C C5 DAO . . . B 2 37.342 22.669 -0.318 1 58.6 ? C5 DAO 201 A 1 
HETATM 8 C C6 DAO . . . B 2 36.872 21.217 -0.34 1 48.12 ? C6 DAO 201 A 1 
HETATM 9 C C7 DAO . . . B 2 38.146 20.364 -0.446 1 50.78 ? C7 DAO 201 A 1 
HETATM 10 C C8 DAO . . . B 2 37.99 19.314 0.644 1 70.71 ? C8 DAO 201 A 1 
HETATM 11 C C9 DAO . . . B 2 38.028 17.938 -0.022 1 75.01 ? C9 DAO 201 A 1 
HETATM 12 C C10 DAO . . . B 2 36.645 17.773 -0.597 1 69.2 ? C10 DAO 201 A 1 
HETATM 13 C C11 DAO . . . B 2 35.919 16.784 0.298 1 64.38 ? C11 DAO 201 A 1 
HETATM 14 C C12 DAO . . . B 2 34.616 16.499 -0.469 1 47.37 ? C12 DAO 201 A 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           14 
#