data_5NUK # _model_server_result.job_id OAedkjn7XsUFgI1nJsW4Wg _model_server_result.datetime_utc '2024-11-14 03:47:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nuk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5NUK # _exptl.entry_id 5NUK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 318.864 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5NUK _cell.length_a 53.16 _cell.length_b 53.16 _cell.length_c 112.619 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NUK _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? disulf ? disulf2 A SG CYS 106 A CYS 106 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? # _chem_comp.formula 'C17 H19 Cl N2 S' _chem_comp.formula_weight 318.864 _chem_comp.id Z80 _chem_comp.mon_nstd_flag . _chem_comp.name 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Chlorpromazine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C17 Z80 sing 397 n y N1 C1 Z80 sing 398 n n N1 C4 Z80 sing 399 n n C2 C1 Z80 doub 400 n y C2 S1 Z80 sing 401 n n N2 C14 Z80 sing 402 n n C3 S1 Z80 sing 403 n n C3 C8 Z80 sing 404 n y C4 C3 Z80 doub 405 n y C5 C6 Z80 sing 406 n y C5 H1 Z80 sing 407 n n C5 C17 Z80 doub 408 n y C6 C7 Z80 doub 409 n y C6 H2 Z80 sing 410 n n C7 C2 Z80 sing 411 n y C8 H3 Z80 sing 412 n n C9 C8 Z80 doub 413 n y C9 H4 Z80 sing 414 n n C10 C9 Z80 sing 415 n y C11 C4 Z80 sing 416 n y C11 C10 Z80 doub 417 n y C11 H5 Z80 sing 418 n n C12 N1 Z80 sing 419 n n C12 H6 Z80 sing 420 n n C12 H7 Z80 sing 421 n n C13 C12 Z80 sing 422 n n C13 H8 Z80 sing 423 n n C13 H9 Z80 sing 424 n n C14 C13 Z80 sing 425 n n C14 H10 Z80 sing 426 n n C14 H11 Z80 sing 427 n n C15 N2 Z80 sing 428 n n C15 H12 Z80 sing 429 n n C15 H13 Z80 sing 430 n n C15 H14 Z80 sing 431 n n C16 N2 Z80 sing 432 n n C16 H15 Z80 sing 433 n n C16 H16 Z80 sing 434 n n C16 H17 Z80 sing 435 n n CL1 C10 Z80 sing 436 n n C7 H18 Z80 sing 437 n n C17 H20 Z80 sing 438 n n # _atom_sites.entry_id 5NUK _atom_sites.fract_transf_matrix[1][1] 0.018811 _atom_sites.fract_transf_matrix[1][2] 0.010861 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008879 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Z80 A 1 201 1 Z80 Z80 . C 3 SO4 A 1 202 1 SO4 SO4 . D 4 GOL A 1 203 1 GOL GOL . E 5 PO4 A 1 204 1 PO4 PO4 . F 6 CL A 1 205 1 CL CL . G 7 HOH A 1 301 105 HOH HOH . G 7 HOH A 2 302 97 HOH HOH . G 7 HOH A 3 303 92 HOH HOH . G 7 HOH A 4 304 98 HOH HOH . G 7 HOH A 5 305 35 HOH HOH . G 7 HOH A 6 306 32 HOH HOH . G 7 HOH A 7 307 29 HOH HOH . G 7 HOH A 8 308 12 HOH HOH . G 7 HOH A 9 309 118 HOH HOH . G 7 HOH A 10 310 39 HOH HOH . G 7 HOH A 11 311 64 HOH HOH . G 7 HOH A 12 312 93 HOH HOH . G 7 HOH A 13 313 75 HOH HOH . G 7 HOH A 14 314 66 HOH HOH . G 7 HOH A 15 315 3 HOH HOH . G 7 HOH A 16 316 36 HOH HOH . G 7 HOH A 17 317 126 HOH HOH . G 7 HOH A 18 318 52 HOH HOH . G 7 HOH A 19 319 7 HOH HOH . G 7 HOH A 20 320 95 HOH HOH . G 7 HOH A 21 321 43 HOH HOH . G 7 HOH A 22 322 23 HOH HOH . G 7 HOH A 23 323 34 HOH HOH . G 7 HOH A 24 324 4 HOH HOH . G 7 HOH A 25 325 78 HOH HOH . G 7 HOH A 26 326 40 HOH HOH . G 7 HOH A 27 327 103 HOH HOH . G 7 HOH A 28 328 15 HOH HOH . G 7 HOH A 29 329 21 HOH HOH . G 7 HOH A 30 330 18 HOH HOH . G 7 HOH A 31 331 54 HOH HOH . G 7 HOH A 32 332 80 HOH HOH . G 7 HOH A 33 333 33 HOH HOH . G 7 HOH A 34 334 73 HOH HOH . G 7 HOH A 35 335 111 HOH HOH . G 7 HOH A 36 336 11 HOH HOH . G 7 HOH A 37 337 22 HOH HOH . G 7 HOH A 38 338 74 HOH HOH . G 7 HOH A 39 339 30 HOH HOH . G 7 HOH A 40 340 79 HOH HOH . G 7 HOH A 41 341 19 HOH HOH . G 7 HOH A 42 342 60 HOH HOH . G 7 HOH A 43 343 25 HOH HOH . G 7 HOH A 44 344 41 HOH HOH . G 7 HOH A 45 345 90 HOH HOH . G 7 HOH A 46 346 65 HOH HOH . G 7 HOH A 47 347 76 HOH HOH . G 7 HOH A 48 348 91 HOH HOH . G 7 HOH A 49 349 100 HOH HOH . G 7 HOH A 50 350 96 HOH HOH . G 7 HOH A 51 351 27 HOH HOH . G 7 HOH A 52 352 17 HOH HOH . G 7 HOH A 53 353 20 HOH HOH . G 7 HOH A 54 354 1 HOH HOH . G 7 HOH A 55 355 2 HOH HOH . G 7 HOH A 56 356 47 HOH HOH . G 7 HOH A 57 357 99 HOH HOH . G 7 HOH A 58 358 94 HOH HOH . G 7 HOH A 59 359 10 HOH HOH . G 7 HOH A 60 360 5 HOH HOH . G 7 HOH A 61 361 45 HOH HOH . G 7 HOH A 62 362 13 HOH HOH . G 7 HOH A 63 363 101 HOH HOH . G 7 HOH A 64 364 51 HOH HOH . G 7 HOH A 65 365 53 HOH HOH . G 7 HOH A 66 366 6 HOH HOH . G 7 HOH A 67 367 113 HOH HOH . G 7 HOH A 68 368 84 HOH HOH . G 7 HOH A 69 369 119 HOH HOH . G 7 HOH A 70 370 121 HOH HOH . G 7 HOH A 71 371 55 HOH HOH . G 7 HOH A 72 372 104 HOH HOH . G 7 HOH A 73 373 112 HOH HOH . G 7 HOH A 74 374 14 HOH HOH . G 7 HOH A 75 375 107 HOH HOH . G 7 HOH A 76 376 8 HOH HOH . G 7 HOH A 77 377 28 HOH HOH . G 7 HOH A 78 378 124 HOH HOH . G 7 HOH A 79 379 86 HOH HOH . G 7 HOH A 80 380 77 HOH HOH . G 7 HOH A 81 381 24 HOH HOH . G 7 HOH A 82 382 16 HOH HOH . G 7 HOH A 83 383 106 HOH HOH . G 7 HOH A 84 384 26 HOH HOH . G 7 HOH A 85 385 81 HOH HOH . G 7 HOH A 86 386 83 HOH HOH . G 7 HOH A 87 387 110 HOH HOH . G 7 HOH A 88 388 85 HOH HOH . G 7 HOH A 89 389 116 HOH HOH . G 7 HOH A 90 390 72 HOH HOH . G 7 HOH A 91 391 125 HOH HOH . G 7 HOH A 92 392 70 HOH HOH . G 7 HOH A 93 393 114 HOH HOH . G 7 HOH A 94 394 37 HOH HOH . G 7 HOH A 95 395 82 HOH HOH . G 7 HOH A 96 396 115 HOH HOH . G 7 HOH A 97 397 31 HOH HOH . G 7 HOH A 98 398 61 HOH HOH . G 7 HOH A 99 399 102 HOH HOH . G 7 HOH A 100 400 48 HOH HOH . G 7 HOH A 101 401 120 HOH HOH . G 7 HOH A 102 402 108 HOH HOH . G 7 HOH A 103 403 71 HOH HOH . G 7 HOH A 104 404 117 HOH HOH . G 7 HOH A 105 405 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 Z80 . . . B 2 -6.085 -7.62 -18.183 0.9 36.71 ? C1 Z80 201 A 1 HETATM 2 N N1 Z80 . . . B 2 -5.098 -7.291 -17.24 0.9 37.78 ? N1 Z80 201 A 1 HETATM 3 S S1 Z80 . . . B 2 -7.871 -7.75 -16.121 0.9 39.68 ? S1 Z80 201 A 1 HETATM 4 C C2 Z80 . . . B 2 -7.408 -7.853 -17.78 0.9 35.77 ? C2 Z80 201 A 1 HETATM 5 N N2 Z80 . . . B 2 -3.849 -2.533 -17.487 0.9 46.41 ? N2 Z80 201 A 1 HETATM 6 C C3 Z80 . . . B 2 -6.338 -8.195 -15.352 0.9 38.91 ? C3 Z80 201 A 1 HETATM 7 C C4 Z80 . . . B 2 -5.119 -7.926 -15.987 0.9 38.74 ? C4 Z80 201 A 1 HETATM 8 C C5 Z80 . . . B 2 -6.709 -8.058 -20.475 0.9 36.9 ? C5 Z80 201 A 1 HETATM 9 C C6 Z80 . . . B 2 -8.014 -8.283 -20.064 0.9 34.67 ? C6 Z80 201 A 1 HETATM 10 C C7 Z80 . . . B 2 -8.367 -8.188 -18.728 0.9 36.15 ? C7 Z80 201 A 1 HETATM 11 C C8 Z80 . . . B 2 -6.337 -8.813 -14.1 0.9 40.86 ? C8 Z80 201 A 1 HETATM 12 C C9 Z80 . . . B 2 -5.138 -9.17 -13.495 0.9 39.29 ? C9 Z80 201 A 1 HETATM 13 C C10 Z80 . . . B 2 -3.935 -8.911 -14.138 0.9 41.73 ? C10 Z80 201 A 1 HETATM 14 C C11 Z80 . . . B 2 -3.924 -8.291 -15.379 0.9 42.13 ? C11 Z80 201 A 1 HETATM 15 C C12 Z80 . . . B 2 -3.993 -6.316 -17.6 0.9 38.28 ? C12 Z80 201 A 1 HETATM 16 C C13 Z80 . . . B 2 -4.532 -4.883 -17.431 0.9 41.95 ? C13 Z80 201 A 1 HETATM 17 C C14 Z80 . . . B 2 -3.48 -3.903 -17.895 0.9 44.51 ? C14 Z80 201 A 1 HETATM 18 C C15 Z80 . . . B 2 -2.854 -2.019 -16.527 0.9 45.69 ? C15 Z80 201 A 1 HETATM 19 C C16 Z80 . . . B 2 -3.902 -1.652 -18.669 0.9 47.87 ? C16 Z80 201 A 1 HETATM 20 CL CL1 Z80 . . . B 2 -2.415 -9.33 -13.412 0.9 53.06 ? CL1 Z80 201 A 1 HETATM 21 C C17 Z80 . . . B 2 -5.746 -7.728 -19.534 0.9 37.53 ? C17 Z80 201 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 21 #