data_5NUO # _model_server_result.job_id LmL7nzskM0po1Wd3XLKfhQ _model_server_result.datetime_utc '2024-11-25 02:54:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nuo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":403}' # _entry.id 5NUO # _exptl.entry_id 5NUO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.438 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _entity.pdbx_number_of_molecules 20 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NUO _cell.length_a 95.597 _cell.length_b 146.461 _cell.length_c 234.931 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 X N N ? 4 AA N N ? 4 BA N N ? 4 CA N N ? 4 DA N N ? 4 EA N N ? 4 FA N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id E _struct_conn.ptnr1_label_atom_id NH2 _struct_conn.ptnr1_label_comp_id ARG _struct_conn.ptnr1_label_seq_id 82 _struct_conn.ptnr1_auth_asym_id E _struct_conn.ptnr1_auth_comp_id ARG _struct_conn.ptnr1_auth_seq_id 82 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id Z _struct_conn.ptnr2_label_atom_id O3 _struct_conn.ptnr2_label_comp_id SO4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id E _struct_conn.ptnr2_auth_comp_id SO4 _struct_conn.ptnr2_auth_seq_id 402 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.3 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H34 O5' _chem_comp.formula_weight 306.438 _chem_comp.id C8E _chem_comp.mon_nstd_flag . _chem_comp.name (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 C8E sing 70 n n C1 H11 C8E sing 71 n n C1 H12 C8E sing 72 n n C1 H13 C8E sing 73 n n C2 C3 C8E sing 74 n n C2 H21 C8E sing 75 n n C2 H22 C8E sing 76 n n C3 C4 C8E sing 77 n n C3 H31 C8E sing 78 n n C3 H32 C8E sing 79 n n C4 C5 C8E sing 80 n n C4 H41 C8E sing 81 n n C4 H42 C8E sing 82 n n C5 C6 C8E sing 83 n n C5 H51 C8E sing 84 n n C5 H52 C8E sing 85 n n C6 C7 C8E sing 86 n n C6 H61 C8E sing 87 n n C6 H62 C8E sing 88 n n C7 C8 C8E sing 89 n n C7 H71 C8E sing 90 n n C7 H72 C8E sing 91 n n C8 O9 C8E sing 92 n n C8 H81 C8E sing 93 n n C8 H82 C8E sing 94 n n O9 C10 C8E sing 95 n n C10 C11 C8E sing 96 n n C10 H101 C8E sing 97 n n C10 H102 C8E sing 98 n n C11 O12 C8E sing 99 n n C11 H111 C8E sing 100 n n C11 H112 C8E sing 101 n n O12 C13 C8E sing 102 n n C13 C14 C8E sing 103 n n C13 H131 C8E sing 104 n n C13 H132 C8E sing 105 n n C14 O15 C8E sing 106 n n C14 H141 C8E sing 107 n n C14 H142 C8E sing 108 n n O15 C16 C8E sing 109 n n C16 C17 C8E sing 110 n n C16 H161 C8E sing 111 n n C16 H162 C8E sing 112 n n C17 O18 C8E sing 113 n n C17 H171 C8E sing 114 n n C17 H172 C8E sing 115 n n O18 C19 C8E sing 116 n n C19 C20 C8E sing 117 n n C19 H191 C8E sing 118 n n C19 H192 C8E sing 119 n n C20 O21 C8E sing 120 n n C20 H201 C8E sing 121 n n C20 H202 C8E sing 122 n n O21 HO2 C8E sing 123 n n # _atom_sites.entry_id 5NUO _atom_sites.fract_transf_matrix[1][1] 0.010461 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006828 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004257 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 SO4 C 1 401 5 SO4 SO4 . H 3 SO4 C 1 402 6 SO4 SO4 . I 4 C8E C 1 403 1 C8E C8E . J 4 C8E C 1 404 2 C8E C8E . K 4 C8E C 1 405 3 C8E C8E . L 4 C8E C 1 406 18 C8E C8E . M 4 C8E D 1 301 4 C8E C8E . N 4 C8E D 1 302 6 C8E C8E . O 4 C8E D 1 303 8 C8E C8E . P 4 C8E D 1 304 14 C8E C8E . Q 4 C8E D 1 305 20 C8E C8E . R 3 SO4 A 1 401 1 SO4 SO4 . S 3 SO4 A 1 402 3 SO4 SO4 . T 4 C8E A 1 403 5 C8E C8E . U 4 C8E A 1 404 7 C8E C8E . V 4 C8E A 1 405 17 C8E C8E . W 4 C8E A 1 406 19 C8E C8E . X 4 C8E B 1 301 16 C8E C8E . Y 3 SO4 E 1 401 2 SO4 SO4 . Z 3 SO4 E 1 402 4 SO4 SO4 . AA 4 C8E E 1 403 9 C8E C8E . BA 4 C8E E 1 404 10 C8E C8E . CA 4 C8E E 1 405 13 C8E C8E . DA 4 C8E E 1 406 15 C8E C8E . EA 4 C8E F 1 301 11 C8E C8E . FA 4 C8E F 1 302 12 C8E C8E . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 C8E . . . AA 4 -40.958 53.866 -91.916 1 44.87 ? C7 C8E 403 E 1 HETATM 2 C C8 C8E . . . AA 4 -39.899 54.888 -92.32 1 47.93 ? C8 C8E 403 E 1 HETATM 3 O O9 C8E . . . AA 4 -38.586 54.438 -92.029 1 51.09 ? O9 C8E 403 E 1 HETATM 4 C C10 C8E . . . AA 4 -37.835 54.139 -93.193 1 50.44 ? C10 C8E 403 E 1 HETATM 5 C C11 C8E . . . AA 4 -36.439 53.576 -92.916 1 47.43 ? C11 C8E 403 E 1 HETATM 6 O O12 C8E . . . AA 4 -36.018 52.846 -94.054 1 49.14 ? O12 C8E 403 E 1 HETATM 7 C C13 C8E . . . AA 4 -34.685 52.375 -93.991 1 47.63 ? C13 C8E 403 E 1 HETATM 8 C C14 C8E . . . AA 4 -33.912 52.627 -95.282 1 42.44 ? C14 C8E 403 E 1 HETATM 9 O O15 C8E . . . AA 4 -33.845 51.433 -96.024 1 40.21 ? O15 C8E 403 E 1 HETATM 10 C C16 C8E . . . AA 4 -32.554 50.866 -96.045 1 44.58 ? C16 C8E 403 E 1 HETATM 11 C C17 C8E . . . AA 4 -31.681 51.397 -97.181 1 47.49 ? C17 C8E 403 E 1 HETATM 12 O O18 C8E . . . AA 4 -30.833 50.379 -97.675 1 49.23 ? O18 C8E 403 E 1 HETATM 13 C C19 C8E . . . AA 4 -29.961 50.8 -98.702 1 50.18 ? C19 C8E 403 E 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #