data_5NUP
#
_model_server_result.job_id            4n6wCB8Nmen-ehhCR2d5Pg 
_model_server_result.datetime_utc      '2024-11-25 04:53:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nup 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"BA","auth_seq_id":302}' 
#
_entry.id    5NUP 
#
_exptl.entry_id    5NUP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5NUP 
_cell.length_a            92.377 
_cell.length_b            145.24 
_cell.length_c            232.535 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NUP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 Q N N 
? 4 R N N 
? 4 BA N N 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 246 n n 
C1B O1B LMT sing 247 n n 
C1B O5B LMT sing 248 n n 
C1B H1B LMT sing 249 n n 
C2B C3B LMT sing 250 n n 
C2B O2B LMT sing 251 n n 
C2B H2B LMT sing 252 n n 
C3B C4B LMT sing 253 n n 
C3B O3B LMT sing 254 n n 
C3B H3B LMT sing 255 n n 
C4B C5B LMT sing 256 n n 
C4B O4' LMT sing 257 n n 
C4B H4B LMT sing 258 n n 
C5B C6B LMT sing 259 n n 
C5B O5B LMT sing 260 n n 
C5B H5B LMT sing 261 n n 
C6B O6B LMT sing 262 n n 
C6B "H6'2" LMT sing 263 n n 
C6B "H6'1" LMT sing 264 n n 
O1B C4' LMT sing 265 n n 
O2B H2O1 LMT sing 266 n n 
O3B H3O1 LMT sing 267 n n 
O4' H4O1 LMT sing 268 n n 
O6B H6B LMT sing 269 n n 
C1' C2' LMT sing 270 n n 
C1' O1' LMT sing 271 n n 
C1' O5' LMT sing 272 n n 
C1' H1' LMT sing 273 n n 
C2' C3' LMT sing 274 n n 
C2' O2' LMT sing 275 n n 
C2' H2' LMT sing 276 n n 
C3' C4' LMT sing 277 n n 
C3' O3' LMT sing 278 n n 
C3' H3' LMT sing 279 n n 
C4' C5' LMT sing 280 n n 
C4' H4' LMT sing 281 n n 
C5' C6' LMT sing 282 n n 
C5' O5' LMT sing 283 n n 
C5' H5' LMT sing 284 n n 
C6' O6' LMT sing 285 n n 
C6' H6D LMT sing 286 n n 
C6' H6E LMT sing 287 n n 
O1' C1 LMT sing 288 n n 
O2' H2O2 LMT sing 289 n n 
O3' H3O2 LMT sing 290 n n 
O6' H6' LMT sing 291 n n 
C1 C2 LMT sing 292 n n 
C1 H12 LMT sing 293 n n 
C1 H11 LMT sing 294 n n 
C2 C3 LMT sing 295 n n 
C2 H22 LMT sing 296 n n 
C2 H21 LMT sing 297 n n 
C3 C4 LMT sing 298 n n 
C3 H32 LMT sing 299 n n 
C3 H31 LMT sing 300 n n 
C4 C5 LMT sing 301 n n 
C4 H42 LMT sing 302 n n 
C4 H41 LMT sing 303 n n 
C5 C6 LMT sing 304 n n 
C5 H52 LMT sing 305 n n 
C5 H51 LMT sing 306 n n 
C6 C7 LMT sing 307 n n 
C6 H62 LMT sing 308 n n 
C6 H61 LMT sing 309 n n 
C7 C8 LMT sing 310 n n 
C7 H72 LMT sing 311 n n 
C7 H71 LMT sing 312 n n 
C8 C9 LMT sing 313 n n 
C8 H82 LMT sing 314 n n 
C8 H81 LMT sing 315 n n 
C9 C10 LMT sing 316 n n 
C9 H92 LMT sing 317 n n 
C9 H91 LMT sing 318 n n 
C10 C11 LMT sing 319 n n 
C10 H102 LMT sing 320 n n 
C10 H101 LMT sing 321 n n 
C11 C12 LMT sing 322 n n 
C11 H112 LMT sing 323 n n 
C11 H111 LMT sing 324 n n 
C12 H123 LMT sing 325 n n 
C12 H122 LMT sing 326 n n 
C12 H121 LMT sing 327 n n 
#
_atom_sites.entry_id                     5NUP 
_atom_sites.fract_transf_matrix[1][1]    0.010825 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006885 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0043 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 C8E A 1 401 1 C8E C8E . 
H 3 C8E A 1 402 2 C8E C8E . 
I 3 C8E A 1 403 3 C8E C8E . 
J 3 C8E A 1 404 7 C8E C8E . 
K 3 C8E A 1 405 11 C8E C8E . 
L 3 C8E A 1 406 12 C8E C8E . 
M 3 C8E B 1 401 8 C8E C8E . 
N 3 C8E B 1 402 9 C8E C8E . 
O 3 C8E B 1 403 10 C8E C8E . 
P 3 C8E B 1 404 19 C8E C8E . 
Q 4 LMT B 1 405 1 LMT LMT . 
R 4 LMT B 1 406 3 LMT LMT . 
S 3 C8E C 1 401 15 C8E C8E . 
T 3 C8E C 1 402 16 C8E C8E . 
U 3 C8E C 1 403 17 C8E C8E . 
V 3 C8E C 1 404 18 C8E C8E . 
W 3 C8E D 1 301 4 C8E C8E . 
X 3 C8E D 1 302 13 C8E C8E . 
Y 3 C8E E 1 301 5 C8E C8E . 
Z 3 C8E E 1 302 14 C8E C8E . 
AA 3 C8E F 1 301 6 C8E C8E . 
BA 4 LMT F 1 302 2 LMT LMT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . BA 4 -36.443 92.751 -91.185 1 110.17 ? C1B LMT 302 F 1 
HETATM 2 C C2B LMT . . . BA 4 -35.684 92.283 -92.434 1 103.84 ? C2B LMT 302 F 1 
HETATM 3 C C3B LMT . . . BA 4 -36.527 91.228 -93.179 1 108.05 ? C3B LMT 302 F 1 
HETATM 4 C C4B LMT . . . BA 4 -37.993 91.223 -92.634 1 109.9 ? C4B LMT 302 F 1 
HETATM 5 C C5B LMT . . . BA 4 -38.438 92.696 -92.463 1 106.7 ? C5B LMT 302 F 1 
HETATM 6 C C6B LMT . . . BA 4 -39.908 92.753 -92.051 1 102.64 ? C6B LMT 302 F 1 
HETATM 7 O O1B LMT . . . BA 4 -35.595 93.498 -90.359 1 116.28 ? O1B LMT 302 F 1 
HETATM 8 O O2B LMT . . . BA 4 -35.489 93.397 -93.206 1 97.82 ? O2B LMT 302 F 1 
HETATM 9 O O3B LMT . . . BA 4 -35.915 89.985 -93.158 1 108.05 ? O3B LMT 302 F 1 
HETATM 10 O O4' LMT . . . BA 4 -38.866 90.577 -93.489 1 113.79 ? O4' LMT 302 F 1 
HETATM 11 O O5B LMT . . . BA 4 -37.616 93.428 -91.556 1 108.9 ? O5B LMT 302 F 1 
HETATM 12 O O6B LMT . . . BA 4 -40.643 93.415 -93.002 1 99.1 ? O6B LMT 302 F 1 
HETATM 13 C C1' LMT . . . BA 4 -32.732 92.702 -87.441 1 106.89 ? C1' LMT 302 F 1 
HETATM 14 C C2' LMT . . . BA 4 -33.597 91.513 -87.894 1 119.25 ? C2' LMT 302 F 1 
HETATM 15 C C3' LMT . . . BA 4 -34.237 91.823 -89.251 1 115.86 ? C3' LMT 302 F 1 
HETATM 16 C C4' LMT . . . BA 4 -35.27 92.95 -89.087 1 115.4 ? C4' LMT 302 F 1 
HETATM 17 C C5' LMT . . . BA 4 -34.609 94.078 -88.233 1 112.59 ? C5' LMT 302 F 1 
HETATM 18 C C6' LMT . . . BA 4 -35.35 94.425 -86.961 1 112.76 ? C6' LMT 302 F 1 
HETATM 19 O O1' LMT . . . BA 4 -32.634 92.764 -86.062 1 83.67 ? O1' LMT 302 F 1 
HETATM 20 O O2' LMT . . . BA 4 -32.771 90.449 -88.082 1 131.36 ? O2' LMT 302 F 1 
HETATM 21 O O3' LMT . . . BA 4 -34.807 90.683 -89.749 1 113.01 ? O3' LMT 302 F 1 
HETATM 22 O O5' LMT . . . BA 4 -33.197 93.952 -88.012 1 110.57 ? O5' LMT 302 F 1 
HETATM 23 O O6' LMT . . . BA 4 -35.966 95.635 -87.201 1 110.58 ? O6' LMT 302 F 1 
HETATM 24 C C1 LMT . . . BA 4 -31.383 92.347 -85.521 1 66.39 ? C1 LMT 302 F 1 
#
_model_server_stats.io_time_ms              30 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           24 
#