data_5NUP
#
_model_server_result.job_id            hrXTF64nE28hM5YWLqcnCw 
_model_server_result.datetime_utc      '2024-11-28 20:56:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nup 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":404}' 
#
_entry.id    5NUP 
#
_exptl.entry_id    5NUP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              306.438 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE 
_entity.pdbx_number_of_molecules    19 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5NUP 
_cell.length_a            92.377 
_cell.length_b            145.24 
_cell.length_c            232.535 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NUP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
#
_chem_comp.formula           'C16 H34 O5' 
_chem_comp.formula_weight    306.438 
_chem_comp.id                C8E 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 C8E sing 70 n n 
C1 H11 C8E sing 71 n n 
C1 H12 C8E sing 72 n n 
C1 H13 C8E sing 73 n n 
C2 C3 C8E sing 74 n n 
C2 H21 C8E sing 75 n n 
C2 H22 C8E sing 76 n n 
C3 C4 C8E sing 77 n n 
C3 H31 C8E sing 78 n n 
C3 H32 C8E sing 79 n n 
C4 C5 C8E sing 80 n n 
C4 H41 C8E sing 81 n n 
C4 H42 C8E sing 82 n n 
C5 C6 C8E sing 83 n n 
C5 H51 C8E sing 84 n n 
C5 H52 C8E sing 85 n n 
C6 C7 C8E sing 86 n n 
C6 H61 C8E sing 87 n n 
C6 H62 C8E sing 88 n n 
C7 C8 C8E sing 89 n n 
C7 H71 C8E sing 90 n n 
C7 H72 C8E sing 91 n n 
C8 O9 C8E sing 92 n n 
C8 H81 C8E sing 93 n n 
C8 H82 C8E sing 94 n n 
O9 C10 C8E sing 95 n n 
C10 C11 C8E sing 96 n n 
C10 H101 C8E sing 97 n n 
C10 H102 C8E sing 98 n n 
C11 O12 C8E sing 99 n n 
C11 H111 C8E sing 100 n n 
C11 H112 C8E sing 101 n n 
O12 C13 C8E sing 102 n n 
C13 C14 C8E sing 103 n n 
C13 H131 C8E sing 104 n n 
C13 H132 C8E sing 105 n n 
C14 O15 C8E sing 106 n n 
C14 H141 C8E sing 107 n n 
C14 H142 C8E sing 108 n n 
O15 C16 C8E sing 109 n n 
C16 C17 C8E sing 110 n n 
C16 H161 C8E sing 111 n n 
C16 H162 C8E sing 112 n n 
C17 O18 C8E sing 113 n n 
C17 H171 C8E sing 114 n n 
C17 H172 C8E sing 115 n n 
O18 C19 C8E sing 116 n n 
C19 C20 C8E sing 117 n n 
C19 H191 C8E sing 118 n n 
C19 H192 C8E sing 119 n n 
C20 O21 C8E sing 120 n n 
C20 H201 C8E sing 121 n n 
C20 H202 C8E sing 122 n n 
O21 HO2 C8E sing 123 n n 
#
_atom_sites.entry_id                     5NUP 
_atom_sites.fract_transf_matrix[1][1]    0.010825 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006885 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0043 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 C8E A 1 401 1 C8E C8E . 
H 3 C8E A 1 402 2 C8E C8E . 
I 3 C8E A 1 403 3 C8E C8E . 
J 3 C8E A 1 404 7 C8E C8E . 
K 3 C8E A 1 405 11 C8E C8E . 
L 3 C8E A 1 406 12 C8E C8E . 
M 3 C8E B 1 401 8 C8E C8E . 
N 3 C8E B 1 402 9 C8E C8E . 
O 3 C8E B 1 403 10 C8E C8E . 
P 3 C8E B 1 404 19 C8E C8E . 
Q 4 LMT B 1 405 1 LMT LMT . 
R 4 LMT B 1 406 3 LMT LMT . 
S 3 C8E C 1 401 15 C8E C8E . 
T 3 C8E C 1 402 16 C8E C8E . 
U 3 C8E C 1 403 17 C8E C8E . 
V 3 C8E C 1 404 18 C8E C8E . 
W 3 C8E D 1 301 4 C8E C8E . 
X 3 C8E D 1 302 13 C8E C8E . 
Y 3 C8E E 1 301 5 C8E C8E . 
Z 3 C8E E 1 302 14 C8E C8E . 
AA 3 C8E F 1 301 6 C8E C8E . 
BA 4 LMT F 1 302 2 LMT LMT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 C8E . . . J 3 -37.793 30.882 -39.119 1 62.83 ? C13 C8E 404 A 1 
HETATM 2 C C14 C8E . . . J 3 -36.297 30.825 -38.791 1 66.62 ? C14 C8E 404 A 1 
HETATM 3 O O15 C8E . . . J 3 -35.54 31.526 -39.766 1 69.34 ? O15 C8E 404 A 1 
HETATM 4 C C16 C8E . . . J 3 -34.157 31.204 -39.792 1 65.42 ? C16 C8E 404 A 1 
HETATM 5 C C17 C8E . . . J 3 -33.29 32.422 -39.457 1 66.78 ? C17 C8E 404 A 1 
HETATM 6 O O18 C8E . . . J 3 -31.916 32.16 -39.702 1 69.57 ? O18 C8E 404 A 1 
HETATM 7 C C19 C8E . . . J 3 -31.306 33.01 -40.663 1 72.55 ? C19 C8E 404 A 1 
HETATM 8 C C20 C8E . . . J 3 -29.831 33.279 -40.332 1 72.48 ? C20 C8E 404 A 1 
HETATM 9 O O21 C8E . . . J 3 -29.387 34.545 -40.813 1 72.34 ? O21 C8E 404 A 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           9 
#