data_5NVI # _model_server_result.job_id kPomvWrhUyWpqxzL3VwGtw _model_server_result.datetime_utc '2024-11-27 21:21:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nvi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":205}' # _entry.id 5NVI # _exptl.entry_id 5NVI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.948 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ARGON _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5NVI _cell.length_a 89.198 _cell.length_b 89.198 _cell.length_c 115.348 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NVI _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 62 A HIS 64 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc2 A NE2 HIS 94 A HIS 96 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? # _chem_comp.formula Ar _chem_comp.formula_weight 39.948 _chem_comp.id AR _chem_comp.mon_nstd_flag . _chem_comp.name ARGON _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5NVI _atom_sites.fract_transf_matrix[1][1] 0.011211 _atom_sites.fract_transf_matrix[1][2] 0.006473 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012945 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008669 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 201 HEM HEM . C 3 SO4 A 1 202 202 SO4 SO4 . D 4 AR A 1 205 205 AR AR . E 5 HOH A 1 301 319 HOH HOH . E 5 HOH A 2 302 386 HOH HOH . E 5 HOH A 3 303 327 HOH HOH . E 5 HOH A 4 304 318 HOH HOH . E 5 HOH A 5 305 330 HOH HOH . E 5 HOH A 6 306 371 HOH HOH . E 5 HOH A 7 307 311 HOH HOH . E 5 HOH A 8 308 326 HOH HOH . E 5 HOH A 9 309 347 HOH HOH . E 5 HOH A 10 310 394 HOH HOH . E 5 HOH A 11 311 416 HOH HOH . E 5 HOH A 12 312 344 HOH HOH . E 5 HOH A 13 313 306 HOH HOH . E 5 HOH A 14 314 369 HOH HOH . E 5 HOH A 15 315 309 HOH HOH . E 5 HOH A 16 316 379 HOH HOH . E 5 HOH A 17 317 413 HOH HOH . E 5 HOH A 18 318 314 HOH HOH . E 5 HOH A 19 319 307 HOH HOH . E 5 HOH A 20 320 354 HOH HOH . E 5 HOH A 21 321 305 HOH HOH . E 5 HOH A 22 322 343 HOH HOH . E 5 HOH A 23 323 321 HOH HOH . E 5 HOH A 24 324 355 HOH HOH . E 5 HOH A 25 325 303 HOH HOH . E 5 HOH A 26 326 308 HOH HOH . E 5 HOH A 27 327 368 HOH HOH . E 5 HOH A 28 328 301 HOH HOH . E 5 HOH A 29 329 383 HOH HOH . E 5 HOH A 30 330 417 HOH HOH . E 5 HOH A 31 331 339 HOH HOH . E 5 HOH A 32 332 398 HOH HOH . E 5 HOH A 33 333 410 HOH HOH . E 5 HOH A 34 334 340 HOH HOH . E 5 HOH A 35 335 325 HOH HOH . E 5 HOH A 36 336 396 HOH HOH . E 5 HOH A 37 337 320 HOH HOH . E 5 HOH A 38 338 346 HOH HOH . E 5 HOH A 39 339 335 HOH HOH . E 5 HOH A 40 340 316 HOH HOH . E 5 HOH A 41 341 373 HOH HOH . E 5 HOH A 42 342 315 HOH HOH . E 5 HOH A 43 343 345 HOH HOH . E 5 HOH A 44 344 342 HOH HOH . E 5 HOH A 45 345 317 HOH HOH . E 5 HOH A 46 346 402 HOH HOH . E 5 HOH A 47 347 381 HOH HOH . E 5 HOH A 48 348 328 HOH HOH . E 5 HOH A 49 349 409 HOH HOH . E 5 HOH A 50 350 363 HOH HOH . E 5 HOH A 51 351 302 HOH HOH . E 5 HOH A 52 352 357 HOH HOH . E 5 HOH A 53 353 333 HOH HOH . E 5 HOH A 54 354 352 HOH HOH . E 5 HOH A 55 355 361 HOH HOH . E 5 HOH A 56 356 412 HOH HOH . E 5 HOH A 57 357 401 HOH HOH . E 5 HOH A 58 358 331 HOH HOH . E 5 HOH A 59 359 304 HOH HOH . E 5 HOH A 60 360 392 HOH HOH . E 5 HOH A 61 361 370 HOH HOH . E 5 HOH A 62 362 376 HOH HOH . E 5 HOH A 63 363 341 HOH HOH . E 5 HOH A 64 364 324 HOH HOH . E 5 HOH A 65 365 385 HOH HOH . E 5 HOH A 66 366 358 HOH HOH . E 5 HOH A 67 367 380 HOH HOH . E 5 HOH A 68 368 404 HOH HOH . E 5 HOH A 69 369 403 HOH HOH . E 5 HOH A 70 370 337 HOH HOH . E 5 HOH A 71 371 397 HOH HOH . E 5 HOH A 72 372 356 HOH HOH . E 5 HOH A 73 373 338 HOH HOH . E 5 HOH A 74 374 312 HOH HOH . E 5 HOH A 75 375 367 HOH HOH . E 5 HOH A 76 376 313 HOH HOH . E 5 HOH A 77 377 375 HOH HOH . E 5 HOH A 78 378 350 HOH HOH . E 5 HOH A 79 379 382 HOH HOH . E 5 HOH A 80 380 351 HOH HOH . E 5 HOH A 81 381 362 HOH HOH . E 5 HOH A 82 382 360 HOH HOH . E 5 HOH A 83 383 414 HOH HOH . E 5 HOH A 84 384 390 HOH HOH . E 5 HOH A 85 385 393 HOH HOH . E 5 HOH A 86 386 348 HOH HOH . E 5 HOH A 87 387 405 HOH HOH . E 5 HOH A 88 388 359 HOH HOH . E 5 HOH A 89 389 336 HOH HOH . E 5 HOH A 90 390 384 HOH HOH . E 5 HOH A 91 391 406 HOH HOH . E 5 HOH A 92 392 374 HOH HOH . E 5 HOH A 93 393 364 HOH HOH . E 5 HOH A 94 394 322 HOH HOH . E 5 HOH A 95 395 310 HOH HOH . E 5 HOH A 96 396 323 HOH HOH . E 5 HOH A 97 397 415 HOH HOH . E 5 HOH A 98 398 407 HOH HOH . E 5 HOH A 99 399 332 HOH HOH . E 5 HOH A 100 400 399 HOH HOH . E 5 HOH A 101 401 334 HOH HOH . E 5 HOH A 102 402 366 HOH HOH . E 5 HOH A 103 403 389 HOH HOH . E 5 HOH A 104 404 391 HOH HOH . E 5 HOH A 105 405 400 HOH HOH . E 5 HOH A 106 406 353 HOH HOH . E 5 HOH A 107 407 349 HOH HOH . E 5 HOH A 108 408 365 HOH HOH . E 5 HOH A 109 409 329 HOH HOH . E 5 HOH A 110 410 372 HOH HOH . E 5 HOH A 111 411 411 HOH HOH . E 5 HOH A 112 412 388 HOH HOH . E 5 HOH A 113 413 408 HOH HOH . E 5 HOH A 114 414 395 HOH HOH . E 5 HOH A 115 415 387 HOH HOH . E 5 HOH A 116 416 378 HOH HOH . E 5 HOH A 117 417 377 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol AR _atom_site.label_atom_id AR _atom_site.label_comp_id AR _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 20.408 _atom_site.Cartn_y 43.104 _atom_site.Cartn_z 37.93 _atom_site.occupancy 0.3 _atom_site.B_iso_or_equiv 35.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id AR _atom_site.auth_comp_id AR _atom_site.auth_seq_id 205 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #