data_5NW3
#
_model_server_result.job_id            P_AEFnZ_1O-Ri0fZ4ZzX5A 
_model_server_result.datetime_utc      '2024-10-12 16:38:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nw3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":102}' 
#
_entry.id    5NW3 
#
_exptl.entry_id    5NW3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5NW3 
_cell.length_a            33.622 
_cell.length_b            34.533 
_cell.length_c            43.071 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NW3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 6 A CYS 5 1_555 B FE FE . A FE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc2 A SG CYS 9 A CYS 8 1_555 B FE FE . A FE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc3 A O GLU 31 A GLU 30 1_555 C NA NA . A NA 102 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.633 ? 
metalc ? metalc4 A O GLU 31 A GLU 30 1_555 D K K . A K 103 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.648 ? 
metalc ? metalc5 A SG CYS 39 A CYS 38 1_555 B FE FE . A FE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc6 A SG CYS 42 A CYS 41 1_555 B FE FE . A FE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc7 C NA NA . A NA 102 1_555 F O HOH . A HOH 246 1_555 ? A ? ? ? ? ? ? ? ? ? ? 3.197 ? 
metalc ? metalc8 C NA NA . A NA 102 1_555 F O HOH . A HOH 251 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.861 ? 
metalc ? metalc9 C NA NA . A NA 102 1_555 F O HOH . A HOH 285 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.791 ? 
metalc ? metalc10 C NA NA . A NA 102 1_555 F O HOH . A HOH 292 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.947 ? 
metalc ? metalc11 C NA NA . A NA 102 1_555 F O HOH . A HOH 307 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.819 ? 
metalc ? metalc12 C NA NA . A NA 102 1_555 F O HOH . A HOH 309 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.992 ? 
metalc ? metalc13 C NA NA . A NA 102 1_555 F O HOH . A HOH 315 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.892 ? 
metalc ? metalc14 D K K . A K 103 1_555 F O HOH . A HOH 246 1_555 ? B ? ? ? ? ? ? ? ? ? ? 3.185 ? 
metalc ? metalc15 D K K . A K 103 1_555 F O HOH . A HOH 251 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.867 ? 
metalc ? metalc16 D K K . A K 103 1_555 F O HOH . A HOH 285 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.807 ? 
metalc ? metalc17 D K K . A K 103 1_555 F O HOH . A HOH 292 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.941 ? 
metalc ? metalc18 D K K . A K 103 1_555 F O HOH . A HOH 307 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.824 ? 
metalc ? metalc19 D K K . A K 103 1_555 F O HOH . A HOH 309 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.98 ? 
metalc ? metalc20 D K K . A K 103 1_555 F O HOH . A HOH 315 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.872 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5NW3 
_atom_sites.fract_transf_matrix[1][1]    0.029742 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.028958 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023217 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FE A 1 101 1 FE FE . 
C 3 NA A 1 102 2 NA NA . 
D 4 K A 1 103 2 K K . 
E 5 PO4 A 1 104 1 PO4 PO4 . 
F 6 HOH A 1 201 205 HOH HOH . 
F 6 HOH A 2 202 91 HOH HOH . 
F 6 HOH A 3 203 208 HOH HOH . 
F 6 HOH A 4 204 78 HOH HOH . 
F 6 HOH A 5 205 39 HOH HOH . 
F 6 HOH A 6 206 75 HOH HOH . 
F 6 HOH A 7 207 187 HOH HOH . 
F 6 HOH A 8 208 72 HOH HOH . 
F 6 HOH A 9 209 71 HOH HOH . 
F 6 HOH A 10 210 32 HOH HOH . 
F 6 HOH A 11 211 154 HOH HOH . 
F 6 HOH A 12 212 165 HOH HOH . 
F 6 HOH A 13 213 13 HOH HOH . 
F 6 HOH A 14 214 112 HOH HOH . 
F 6 HOH A 15 215 60 HOH HOH . 
F 6 HOH A 16 216 9 HOH HOH . 
F 6 HOH A 17 217 8 HOH HOH . 
F 6 HOH A 18 218 70 HOH HOH . 
F 6 HOH A 19 219 20 HOH HOH . 
F 6 HOH A 20 220 4 HOH HOH . 
F 6 HOH A 21 221 49 HOH HOH . 
F 6 HOH A 22 222 65 HOH HOH . 
F 6 HOH A 23 223 28 HOH HOH . 
F 6 HOH A 24 224 2 HOH HOH . 
F 6 HOH A 25 225 23 HOH HOH . 
F 6 HOH A 26 226 140 HOH HOH . 
F 6 HOH A 27 227 44 HOH HOH . 
F 6 HOH A 28 228 6 HOH HOH . 
F 6 HOH A 29 229 116 HOH HOH . 
F 6 HOH A 30 230 81 HOH HOH . 
F 6 HOH A 31 231 85 HOH HOH . 
F 6 HOH A 32 232 30 HOH HOH . 
F 6 HOH A 33 233 10 HOH HOH . 
F 6 HOH A 34 234 106 HOH HOH . 
F 6 HOH A 35 235 7 HOH HOH . 
F 6 HOH A 36 236 27 HOH HOH . 
F 6 HOH A 37 237 11 HOH HOH . 
F 6 HOH A 38 238 31 HOH HOH . 
F 6 HOH A 39 239 37 HOH HOH . 
F 6 HOH A 40 240 230 HOH HOH . 
F 6 HOH A 41 241 132 HOH HOH . 
F 6 HOH A 42 242 186 HOH HOH . 
F 6 HOH A 43 243 125 HOH HOH . 
F 6 HOH A 44 244 48 HOH HOH . 
F 6 HOH A 45 245 88 HOH HOH . 
F 6 HOH A 46 246 61 HOH HOH . 
F 6 HOH A 47 247 73 HOH HOH . 
F 6 HOH A 48 248 83 HOH HOH . 
F 6 HOH A 49 249 21 HOH HOH . 
F 6 HOH A 50 250 14 HOH HOH . 
F 6 HOH A 51 251 43 HOH HOH . 
F 6 HOH A 52 252 142 HOH HOH . 
F 6 HOH A 53 253 24 HOH HOH . 
F 6 HOH A 54 254 89 HOH HOH . 
F 6 HOH A 55 255 222 HOH HOH . 
F 6 HOH A 56 256 225 HOH HOH . 
F 6 HOH A 57 257 77 HOH HOH . 
F 6 HOH A 58 258 66 HOH HOH . 
F 6 HOH A 59 259 55 HOH HOH . 
F 6 HOH A 60 260 41 HOH HOH . 
F 6 HOH A 61 261 135 HOH HOH . 
F 6 HOH A 62 262 15 HOH HOH . 
F 6 HOH A 63 263 3 HOH HOH . 
F 6 HOH A 64 264 115 HOH HOH . 
F 6 HOH A 65 265 5 HOH HOH . 
F 6 HOH A 66 266 68 HOH HOH . 
F 6 HOH A 67 267 16 HOH HOH . 
F 6 HOH A 68 268 45 HOH HOH . 
F 6 HOH A 69 269 229 HOH HOH . 
F 6 HOH A 70 270 34 HOH HOH . 
F 6 HOH A 71 271 126 HOH HOH . 
F 6 HOH A 72 272 35 HOH HOH . 
F 6 HOH A 73 273 19 HOH HOH . 
F 6 HOH A 74 274 12 HOH HOH . 
F 6 HOH A 75 275 92 HOH HOH . 
F 6 HOH A 76 276 56 HOH HOH . 
F 6 HOH A 77 277 18 HOH HOH . 
F 6 HOH A 78 278 22 HOH HOH . 
F 6 HOH A 79 279 38 HOH HOH . 
F 6 HOH A 80 280 52 HOH HOH . 
F 6 HOH A 81 281 1 HOH HOH . 
F 6 HOH A 82 282 124 HOH HOH . 
F 6 HOH A 83 283 93 HOH HOH . 
F 6 HOH A 84 284 168 HOH HOH . 
F 6 HOH A 85 285 179 HOH HOH . 
F 6 HOH A 86 286 144 HOH HOH . 
F 6 HOH A 87 287 62 HOH HOH . 
F 6 HOH A 88 288 156 HOH HOH . 
F 6 HOH A 89 289 25 HOH HOH . 
F 6 HOH A 90 290 51 HOH HOH . 
F 6 HOH A 91 291 141 HOH HOH . 
F 6 HOH A 92 292 155 HOH HOH . 
F 6 HOH A 93 293 224 HOH HOH . 
F 6 HOH A 94 294 90 HOH HOH . 
F 6 HOH A 95 295 29 HOH HOH . 
F 6 HOH A 96 296 96 HOH HOH . 
F 6 HOH A 97 297 128 HOH HOH . 
F 6 HOH A 98 298 184 HOH HOH . 
F 6 HOH A 99 299 147 HOH HOH . 
F 6 HOH A 100 300 64 HOH HOH . 
F 6 HOH A 101 301 76 HOH HOH . 
F 6 HOH A 102 302 143 HOH HOH . 
F 6 HOH A 103 303 79 HOH HOH . 
F 6 HOH A 104 304 80 HOH HOH . 
F 6 HOH A 105 305 171 HOH HOH . 
F 6 HOH A 106 306 82 HOH HOH . 
F 6 HOH A 107 307 170 HOH HOH . 
F 6 HOH A 108 308 110 HOH HOH . 
F 6 HOH A 109 309 87 HOH HOH . 
F 6 HOH A 110 310 46 HOH HOH . 
F 6 HOH A 111 311 54 HOH HOH . 
F 6 HOH A 112 312 114 HOH HOH . 
F 6 HOH A 113 313 63 HOH HOH . 
F 6 HOH A 114 314 101 HOH HOH . 
F 6 HOH A 115 315 111 HOH HOH . 
F 6 HOH A 116 316 151 HOH HOH . 
F 6 HOH A 117 317 58 HOH HOH . 
F 6 HOH A 118 318 152 HOH HOH . 
F 6 HOH A 119 319 193 HOH HOH . 
F 6 HOH A 120 320 98 HOH HOH . 
F 6 HOH A 121 321 94 HOH HOH . 
F 6 HOH A 122 322 166 HOH HOH . 
F 6 HOH A 123 323 36 HOH HOH . 
F 6 HOH A 124 324 109 HOH HOH . 
F 6 HOH A 125 325 97 HOH HOH . 
F 6 HOH A 126 326 163 HOH HOH . 
F 6 HOH A 127 327 50 HOH HOH . 
F 6 HOH A 128 328 127 HOH HOH . 
F 6 HOH A 129 329 118 HOH HOH . 
F 6 HOH A 130 330 103 HOH HOH . 
F 6 HOH A 131 331 157 HOH HOH . 
F 6 HOH A 132 332 121 HOH HOH . 
F 6 HOH A 133 333 47 HOH HOH . 
F 6 HOH A 134 334 183 HOH HOH . 
F 6 HOH A 135 335 59 HOH HOH . 
F 6 HOH A 136 336 95 HOH HOH . 
F 6 HOH A 137 337 17 HOH HOH . 
F 6 HOH A 138 338 40 HOH HOH . 
F 6 HOH A 139 339 123 HOH HOH . 
F 6 HOH A 140 340 53 HOH HOH . 
F 6 HOH A 141 341 74 HOH HOH . 
F 6 HOH A 142 342 33 HOH HOH . 
F 6 HOH A 143 343 122 HOH HOH . 
F 6 HOH A 144 344 107 HOH HOH . 
F 6 HOH A 145 345 173 HOH HOH . 
F 6 HOH A 146 346 131 HOH HOH . 
F 6 HOH A 147 347 150 HOH HOH . 
F 6 HOH A 148 348 161 HOH HOH . 
F 6 HOH A 149 349 102 HOH HOH . 
F 6 HOH A 150 350 42 HOH HOH . 
F 6 HOH A 151 351 160 HOH HOH . 
F 6 HOH A 152 352 149 HOH HOH . 
F 6 HOH A 153 353 84 HOH HOH . 
F 6 HOH A 154 354 178 HOH HOH . 
F 6 HOH A 155 355 218 HOH HOH . 
F 6 HOH A 156 356 136 HOH HOH . 
F 6 HOH A 157 357 119 HOH HOH . 
F 6 HOH A 158 358 145 HOH HOH . 
F 6 HOH A 159 359 117 HOH HOH . 
F 6 HOH A 160 360 130 HOH HOH . 
F 6 HOH A 161 361 213 HOH HOH . 
F 6 HOH A 162 362 57 HOH HOH . 
F 6 HOH A 163 363 195 HOH HOH . 
F 6 HOH A 164 364 176 HOH HOH . 
F 6 HOH A 165 365 174 HOH HOH . 
F 6 HOH A 166 366 146 HOH HOH . 
F 6 HOH A 167 367 169 HOH HOH . 
F 6 HOH A 168 368 134 HOH HOH . 
F 6 HOH A 169 369 138 HOH HOH . 
F 6 HOH A 170 370 162 HOH HOH . 
F 6 HOH A 171 371 69 HOH HOH . 
F 6 HOH A 172 372 194 HOH HOH . 
F 6 HOH A 173 373 148 HOH HOH . 
F 6 HOH A 174 374 175 HOH HOH . 
F 6 HOH A 175 375 196 HOH HOH . 
F 6 HOH A 176 376 86 HOH HOH . 
F 6 HOH A 177 377 219 HOH HOH . 
F 6 HOH A 178 378 137 HOH HOH . 
F 6 HOH A 179 379 104 HOH HOH . 
F 6 HOH A 180 380 158 HOH HOH . 
F 6 HOH A 181 381 99 HOH HOH . 
F 6 HOH A 182 382 139 HOH HOH . 
F 6 HOH A 183 383 153 HOH HOH . 
F 6 HOH A 184 384 159 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          A 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               6.806 
_atom_site.Cartn_y               -7.658 
_atom_site.Cartn_z               1.305 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        24.83 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           102 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#