data_5NWJ # _model_server_result.job_id gMV_7PZ3cMq9JJHXZ_tZWQ _model_server_result.datetime_utc '2024-11-15 13:42:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nwj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 5NWJ # _exptl.entry_id 5NWJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5NWJ _cell.length_a 109.034 _cell.length_b 109.034 _cell.length_c 136.712 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NWJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_555 -y,-x,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 22.785333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C SER 5 P SER 675 1_555 B N SEP 6 P SEP 676 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 B C SEP 6 P SEP 676 1_555 B N ASN 7 P ASN 677 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 272 n n C1 C2 PGE sing 273 n n C1 H1 PGE sing 274 n n C1 H12 PGE sing 275 n n O1 HO1 PGE sing 276 n n C2 O2 PGE sing 277 n n C2 H2 PGE sing 278 n n C2 H22 PGE sing 279 n n O2 C3 PGE sing 280 n n C3 C4 PGE sing 281 n n C3 H3 PGE sing 282 n n C3 H32 PGE sing 283 n n C4 O3 PGE sing 284 n n C4 H4 PGE sing 285 n n C4 H42 PGE sing 286 n n O4 C6 PGE sing 287 n n O4 HO4 PGE sing 288 n n C6 C5 PGE sing 289 n n C6 H6 PGE sing 290 n n C6 H62 PGE sing 291 n n C5 O3 PGE sing 292 n n C5 H5 PGE sing 293 n n C5 H52 PGE sing 294 n n # _atom_sites.entry_id 5NWJ _atom_sites.fract_transf_matrix[1][1] 0.009171 _atom_sites.fract_transf_matrix[1][2] 0.005295 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01059 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007315 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PGE A 1 301 1 PGE PGE . D 3 PGE A 1 302 2 PGE PGE . E 4 PEG A 1 303 3 PEG PEG . F 5 GOL A 1 304 4 GOL GOL . G 6 ACT P 1 701 5 ACT ACT . H 7 HOH A 1 401 192 HOH HOH . H 7 HOH A 2 402 190 HOH HOH . H 7 HOH A 3 403 84 HOH HOH . H 7 HOH A 4 404 154 HOH HOH . H 7 HOH A 5 405 163 HOH HOH . H 7 HOH A 6 406 152 HOH HOH . H 7 HOH A 7 407 172 HOH HOH . H 7 HOH A 8 408 180 HOH HOH . H 7 HOH A 9 409 167 HOH HOH . H 7 HOH A 10 410 2 HOH HOH . H 7 HOH A 11 411 175 HOH HOH . H 7 HOH A 12 412 169 HOH HOH . H 7 HOH A 13 413 21 HOH HOH . H 7 HOH A 14 414 3 HOH HOH . H 7 HOH A 15 415 88 HOH HOH . H 7 HOH A 16 416 27 HOH HOH . H 7 HOH A 17 417 12 HOH HOH . H 7 HOH A 18 418 89 HOH HOH . H 7 HOH A 19 419 11 HOH HOH . H 7 HOH A 20 420 55 HOH HOH . H 7 HOH A 21 421 59 HOH HOH . H 7 HOH A 22 422 150 HOH HOH . H 7 HOH A 23 423 151 HOH HOH . H 7 HOH A 24 424 72 HOH HOH . H 7 HOH A 25 425 188 HOH HOH . H 7 HOH A 26 426 146 HOH HOH . H 7 HOH A 27 427 219 HOH HOH . H 7 HOH A 28 428 9 HOH HOH . H 7 HOH A 29 429 103 HOH HOH . H 7 HOH A 30 430 85 HOH HOH . H 7 HOH A 31 431 22 HOH HOH . H 7 HOH A 32 432 69 HOH HOH . H 7 HOH A 33 433 184 HOH HOH . H 7 HOH A 34 434 209 HOH HOH . H 7 HOH A 35 435 173 HOH HOH . H 7 HOH A 36 436 185 HOH HOH . H 7 HOH A 37 437 186 HOH HOH . H 7 HOH A 38 438 132 HOH HOH . H 7 HOH A 39 439 98 HOH HOH . H 7 HOH A 40 440 28 HOH HOH . H 7 HOH A 41 441 130 HOH HOH . H 7 HOH A 42 442 200 HOH HOH . H 7 HOH A 43 443 126 HOH HOH . H 7 HOH A 44 444 91 HOH HOH . H 7 HOH A 45 445 58 HOH HOH . H 7 HOH A 46 446 50 HOH HOH . H 7 HOH A 47 447 30 HOH HOH . H 7 HOH A 48 448 138 HOH HOH . H 7 HOH A 49 449 109 HOH HOH . H 7 HOH A 50 450 222 HOH HOH . H 7 HOH A 51 451 18 HOH HOH . H 7 HOH A 52 452 164 HOH HOH . H 7 HOH A 53 453 201 HOH HOH . H 7 HOH A 54 454 144 HOH HOH . H 7 HOH A 55 455 1 HOH HOH . H 7 HOH A 56 456 223 HOH HOH . H 7 HOH A 57 457 211 HOH HOH . H 7 HOH A 58 458 10 HOH HOH . H 7 HOH A 59 459 111 HOH HOH . H 7 HOH A 60 460 92 HOH HOH . H 7 HOH A 61 461 86 HOH HOH . H 7 HOH A 62 462 99 HOH HOH . H 7 HOH A 63 463 33 HOH HOH . H 7 HOH A 64 464 166 HOH HOH . H 7 HOH A 65 465 220 HOH HOH . H 7 HOH A 66 466 73 HOH HOH . H 7 HOH A 67 467 8 HOH HOH . H 7 HOH A 68 468 94 HOH HOH . H 7 HOH A 69 469 32 HOH HOH . H 7 HOH A 70 470 205 HOH HOH . H 7 HOH A 71 471 127 HOH HOH . H 7 HOH A 72 472 25 HOH HOH . H 7 HOH A 73 473 145 HOH HOH . H 7 HOH A 74 474 162 HOH HOH . H 7 HOH A 75 475 193 HOH HOH . H 7 HOH A 76 476 46 HOH HOH . H 7 HOH A 77 477 105 HOH HOH . H 7 HOH A 78 478 171 HOH HOH . H 7 HOH A 79 479 45 HOH HOH . H 7 HOH A 80 480 139 HOH HOH . H 7 HOH A 81 481 161 HOH HOH . H 7 HOH A 82 482 24 HOH HOH . H 7 HOH A 83 483 65 HOH HOH . H 7 HOH A 84 484 155 HOH HOH . H 7 HOH A 85 485 13 HOH HOH . H 7 HOH A 86 486 115 HOH HOH . H 7 HOH A 87 487 121 HOH HOH . H 7 HOH A 88 488 19 HOH HOH . H 7 HOH A 89 489 107 HOH HOH . H 7 HOH A 90 490 68 HOH HOH . H 7 HOH A 91 491 156 HOH HOH . H 7 HOH A 92 492 23 HOH HOH . H 7 HOH A 93 493 20 HOH HOH . H 7 HOH A 94 494 95 HOH HOH . H 7 HOH A 95 495 62 HOH HOH . H 7 HOH A 96 496 15 HOH HOH . H 7 HOH A 97 497 40 HOH HOH . H 7 HOH A 98 498 119 HOH HOH . H 7 HOH A 99 499 196 HOH HOH . H 7 HOH A 100 500 39 HOH HOH . H 7 HOH A 101 501 228 HOH HOH . H 7 HOH A 102 502 157 HOH HOH . H 7 HOH A 103 503 128 HOH HOH . H 7 HOH A 104 504 96 HOH HOH . H 7 HOH A 105 505 170 HOH HOH . H 7 HOH A 106 506 64 HOH HOH . H 7 HOH A 107 507 207 HOH HOH . H 7 HOH A 108 508 194 HOH HOH . H 7 HOH A 109 509 56 HOH HOH . H 7 HOH A 110 510 93 HOH HOH . H 7 HOH A 111 511 131 HOH HOH . H 7 HOH A 112 512 174 HOH HOH . H 7 HOH A 113 513 35 HOH HOH . H 7 HOH A 114 514 31 HOH HOH . H 7 HOH A 115 515 189 HOH HOH . H 7 HOH A 116 516 135 HOH HOH . H 7 HOH A 117 517 134 HOH HOH . H 7 HOH A 118 518 53 HOH HOH . H 7 HOH A 119 519 49 HOH HOH . H 7 HOH A 120 520 104 HOH HOH . H 7 HOH A 121 521 136 HOH HOH . H 7 HOH A 122 522 168 HOH HOH . H 7 HOH A 123 523 81 HOH HOH . H 7 HOH A 124 524 100 HOH HOH . H 7 HOH A 125 525 82 HOH HOH . H 7 HOH A 126 526 110 HOH HOH . H 7 HOH A 127 527 210 HOH HOH . H 7 HOH A 128 528 75 HOH HOH . H 7 HOH A 129 529 101 HOH HOH . H 7 HOH A 130 530 63 HOH HOH . H 7 HOH A 131 531 208 HOH HOH . H 7 HOH A 132 532 159 HOH HOH . H 7 HOH A 133 533 47 HOH HOH . H 7 HOH A 134 534 61 HOH HOH . H 7 HOH A 135 535 217 HOH HOH . H 7 HOH A 136 536 160 HOH HOH . H 7 HOH A 137 537 140 HOH HOH . H 7 HOH A 138 538 143 HOH HOH . H 7 HOH A 139 539 90 HOH HOH . H 7 HOH A 140 540 187 HOH HOH . H 7 HOH A 141 541 183 HOH HOH . H 7 HOH A 142 542 114 HOH HOH . H 7 HOH A 143 543 179 HOH HOH . H 7 HOH A 144 544 221 HOH HOH . H 7 HOH A 145 545 214 HOH HOH . H 7 HOH A 146 546 227 HOH HOH . H 7 HOH A 147 547 197 HOH HOH . H 7 HOH A 148 548 26 HOH HOH . H 7 HOH A 149 549 87 HOH HOH . H 7 HOH A 150 550 177 HOH HOH . H 7 HOH A 151 551 79 HOH HOH . H 7 HOH A 152 552 147 HOH HOH . H 7 HOH A 153 553 125 HOH HOH . H 7 HOH A 154 554 116 HOH HOH . H 7 HOH A 155 555 112 HOH HOH . H 7 HOH A 156 556 198 HOH HOH . H 7 HOH A 157 557 204 HOH HOH . H 7 HOH A 158 558 117 HOH HOH . H 7 HOH A 159 559 133 HOH HOH . H 7 HOH A 160 560 118 HOH HOH . H 7 HOH A 161 561 97 HOH HOH . H 7 HOH A 162 562 199 HOH HOH . H 7 HOH A 163 563 71 HOH HOH . H 7 HOH A 164 564 191 HOH HOH . H 7 HOH A 165 565 153 HOH HOH . H 7 HOH A 166 566 113 HOH HOH . H 7 HOH A 167 567 137 HOH HOH . H 7 HOH A 168 568 182 HOH HOH . H 7 HOH A 169 569 206 HOH HOH . H 7 HOH A 170 570 129 HOH HOH . H 7 HOH A 171 571 225 HOH HOH . H 7 HOH A 172 572 142 HOH HOH . H 7 HOH A 173 573 203 HOH HOH . I 7 HOH P 1 801 16 HOH HOH . I 7 HOH P 2 802 78 HOH HOH . I 7 HOH P 3 803 60 HOH HOH . I 7 HOH P 4 804 76 HOH HOH . I 7 HOH P 5 805 229 HOH HOH . I 7 HOH P 6 806 226 HOH HOH . I 7 HOH P 7 807 77 HOH HOH . I 7 HOH P 8 808 218 HOH HOH . I 7 HOH P 9 809 215 HOH HOH . I 7 HOH P 10 810 216 HOH HOH . I 7 HOH P 11 811 80 HOH HOH . I 7 HOH P 12 812 181 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . C 3 51.75 -38.435 21.998 1 71.43 ? C1 PGE 301 A 1 HETATM 2 O O1 PGE . . . C 3 52.813 -39.337 21.813 1 70.64 ? O1 PGE 301 A 1 HETATM 3 C C2 PGE . . . C 3 52.065 -37.115 21.33 1 76.78 ? C2 PGE 301 A 1 HETATM 4 O O2 PGE . . . C 3 52.369 -36.171 22.34 1 84.82 ? O2 PGE 301 A 1 HETATM 5 C C3 PGE . . . C 3 52.552 -34.863 21.847 1 78.21 ? C3 PGE 301 A 1 HETATM 6 C C4 PGE . . . C 3 52.008 -33.879 22.858 1 77.13 ? C4 PGE 301 A 1 HETATM 7 O O4 PGE . . . C 3 52.684 -35.417 27.033 1 75.4 ? O4 PGE 301 A 1 HETATM 8 C C6 PGE . . . C 3 53.048 -34.301 26.251 1 73.29 ? C6 PGE 301 A 1 HETATM 9 C C5 PGE . . . C 3 52.078 -34.175 25.115 1 69.92 ? C5 PGE 301 A 1 HETATM 10 O O3 PGE . . . C 3 52.836 -33.876 23.985 1 76.21 ? O3 PGE 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #