data_5NWS # _model_server_result.job_id ryrYRkAGYIdyYHnXsj13dg _model_server_result.datetime_utc '2024-11-05 01:24:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nws # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 5NWS # _exptl.entry_id 5NWS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NWS _cell.length_a 79.254 _cell.length_b 129.539 _cell.length_c 111.611 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NWS _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 382 A CYS 382 1_555 E FE HEM . A HEM 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc2 E FE HEM . A HEM 504 1_555 F O HOH . A HOH 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 332 n n O1 HO1 PG4 sing 333 n n C1 C2 PG4 sing 334 n n C1 H11 PG4 sing 335 n n C1 H12 PG4 sing 336 n n C2 O2 PG4 sing 337 n n C2 H21 PG4 sing 338 n n C2 H22 PG4 sing 339 n n O2 C3 PG4 sing 340 n n C3 C4 PG4 sing 341 n n C3 H31 PG4 sing 342 n n C3 H32 PG4 sing 343 n n C4 O3 PG4 sing 344 n n C4 H41 PG4 sing 345 n n C4 H42 PG4 sing 346 n n O3 C5 PG4 sing 347 n n C5 C6 PG4 sing 348 n n C5 H51 PG4 sing 349 n n C5 H52 PG4 sing 350 n n C6 O4 PG4 sing 351 n n C6 H61 PG4 sing 352 n n C6 H62 PG4 sing 353 n n O4 C7 PG4 sing 354 n n C7 C8 PG4 sing 355 n n C7 H71 PG4 sing 356 n n C7 H72 PG4 sing 357 n n C8 O5 PG4 sing 358 n n C8 H81 PG4 sing 359 n n C8 H82 PG4 sing 360 n n O5 HO5 PG4 sing 361 n n # _atom_sites.entry_id 5NWS _atom_sites.fract_transf_matrix[1][1] 0.012618 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00772 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00896 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 501 1 GOL GOL . C 2 GOL A 1 502 2 GOL GOL . D 3 PG4 A 1 503 1 PG4 PG4 . E 4 HEM A 1 504 1 HEM HEM . F 5 HOH A 1 601 222 HOH HOH . F 5 HOH A 2 602 70 HOH HOH . F 5 HOH A 3 603 231 HOH HOH . F 5 HOH A 4 604 60 HOH HOH . F 5 HOH A 5 605 182 HOH HOH . F 5 HOH A 6 606 84 HOH HOH . F 5 HOH A 7 607 142 HOH HOH . F 5 HOH A 8 608 64 HOH HOH . F 5 HOH A 9 609 221 HOH HOH . F 5 HOH A 10 610 50 HOH HOH . F 5 HOH A 11 611 195 HOH HOH . F 5 HOH A 12 612 99 HOH HOH . F 5 HOH A 13 613 106 HOH HOH . F 5 HOH A 14 614 7 HOH HOH . F 5 HOH A 15 615 101 HOH HOH . F 5 HOH A 16 616 162 HOH HOH . F 5 HOH A 17 617 88 HOH HOH . F 5 HOH A 18 618 161 HOH HOH . F 5 HOH A 19 619 137 HOH HOH . F 5 HOH A 20 620 76 HOH HOH . F 5 HOH A 21 621 40 HOH HOH . F 5 HOH A 22 622 15 HOH HOH . F 5 HOH A 23 623 16 HOH HOH . F 5 HOH A 24 624 178 HOH HOH . F 5 HOH A 25 625 53 HOH HOH . F 5 HOH A 26 626 41 HOH HOH . F 5 HOH A 27 627 3 HOH HOH . F 5 HOH A 28 628 33 HOH HOH . F 5 HOH A 29 629 176 HOH HOH . F 5 HOH A 30 630 110 HOH HOH . F 5 HOH A 31 631 54 HOH HOH . F 5 HOH A 32 632 34 HOH HOH . F 5 HOH A 33 633 147 HOH HOH . F 5 HOH A 34 634 119 HOH HOH . F 5 HOH A 35 635 83 HOH HOH . F 5 HOH A 36 636 95 HOH HOH . F 5 HOH A 37 637 29 HOH HOH . F 5 HOH A 38 638 139 HOH HOH . F 5 HOH A 39 639 94 HOH HOH . F 5 HOH A 40 640 103 HOH HOH . F 5 HOH A 41 641 56 HOH HOH . F 5 HOH A 42 642 36 HOH HOH . F 5 HOH A 43 643 155 HOH HOH . F 5 HOH A 44 644 17 HOH HOH . F 5 HOH A 45 645 5 HOH HOH . F 5 HOH A 46 646 151 HOH HOH . F 5 HOH A 47 647 44 HOH HOH . F 5 HOH A 48 648 118 HOH HOH . F 5 HOH A 49 649 66 HOH HOH . F 5 HOH A 50 650 80 HOH HOH . F 5 HOH A 51 651 209 HOH HOH . F 5 HOH A 52 652 18 HOH HOH . F 5 HOH A 53 653 105 HOH HOH . F 5 HOH A 54 654 13 HOH HOH . F 5 HOH A 55 655 6 HOH HOH . F 5 HOH A 56 656 52 HOH HOH . F 5 HOH A 57 657 4 HOH HOH . F 5 HOH A 58 658 86 HOH HOH . F 5 HOH A 59 659 12 HOH HOH . F 5 HOH A 60 660 21 HOH HOH . F 5 HOH A 61 661 107 HOH HOH . F 5 HOH A 62 662 77 HOH HOH . F 5 HOH A 63 663 71 HOH HOH . F 5 HOH A 64 664 112 HOH HOH . F 5 HOH A 65 665 153 HOH HOH . F 5 HOH A 66 666 31 HOH HOH . F 5 HOH A 67 667 204 HOH HOH . F 5 HOH A 68 668 172 HOH HOH . F 5 HOH A 69 669 57 HOH HOH . F 5 HOH A 70 670 196 HOH HOH . F 5 HOH A 71 671 27 HOH HOH . F 5 HOH A 72 672 59 HOH HOH . F 5 HOH A 73 673 42 HOH HOH . F 5 HOH A 74 674 150 HOH HOH . F 5 HOH A 75 675 61 HOH HOH . F 5 HOH A 76 676 170 HOH HOH . F 5 HOH A 77 677 146 HOH HOH . F 5 HOH A 78 678 138 HOH HOH . F 5 HOH A 79 679 114 HOH HOH . F 5 HOH A 80 680 152 HOH HOH . F 5 HOH A 81 681 22 HOH HOH . F 5 HOH A 82 682 19 HOH HOH . F 5 HOH A 83 683 38 HOH HOH . F 5 HOH A 84 684 46 HOH HOH . F 5 HOH A 85 685 20 HOH HOH . F 5 HOH A 86 686 98 HOH HOH . F 5 HOH A 87 687 133 HOH HOH . F 5 HOH A 88 688 188 HOH HOH . F 5 HOH A 89 689 32 HOH HOH . F 5 HOH A 90 690 113 HOH HOH . F 5 HOH A 91 691 78 HOH HOH . F 5 HOH A 92 692 1 HOH HOH . F 5 HOH A 93 693 198 HOH HOH . F 5 HOH A 94 694 230 HOH HOH . F 5 HOH A 95 695 184 HOH HOH . F 5 HOH A 96 696 48 HOH HOH . F 5 HOH A 97 697 30 HOH HOH . F 5 HOH A 98 698 2 HOH HOH . F 5 HOH A 99 699 65 HOH HOH . F 5 HOH A 100 700 109 HOH HOH . F 5 HOH A 101 701 9 HOH HOH . F 5 HOH A 102 702 58 HOH HOH . F 5 HOH A 103 703 179 HOH HOH . F 5 HOH A 104 704 126 HOH HOH . F 5 HOH A 105 705 62 HOH HOH . F 5 HOH A 106 706 79 HOH HOH . F 5 HOH A 107 707 8 HOH HOH . F 5 HOH A 108 708 130 HOH HOH . F 5 HOH A 109 709 93 HOH HOH . F 5 HOH A 110 710 132 HOH HOH . F 5 HOH A 111 711 26 HOH HOH . F 5 HOH A 112 712 10 HOH HOH . F 5 HOH A 113 713 104 HOH HOH . F 5 HOH A 114 714 159 HOH HOH . F 5 HOH A 115 715 163 HOH HOH . F 5 HOH A 116 716 63 HOH HOH . F 5 HOH A 117 717 148 HOH HOH . F 5 HOH A 118 718 97 HOH HOH . F 5 HOH A 119 719 154 HOH HOH . F 5 HOH A 120 720 11 HOH HOH . F 5 HOH A 121 721 145 HOH HOH . F 5 HOH A 122 722 124 HOH HOH . F 5 HOH A 123 723 68 HOH HOH . F 5 HOH A 124 724 175 HOH HOH . F 5 HOH A 125 725 219 HOH HOH . F 5 HOH A 126 726 185 HOH HOH . F 5 HOH A 127 727 186 HOH HOH . F 5 HOH A 128 728 111 HOH HOH . F 5 HOH A 129 729 117 HOH HOH . F 5 HOH A 130 730 199 HOH HOH . F 5 HOH A 131 731 125 HOH HOH . F 5 HOH A 132 732 203 HOH HOH . F 5 HOH A 133 733 208 HOH HOH . F 5 HOH A 134 734 177 HOH HOH . F 5 HOH A 135 735 69 HOH HOH . F 5 HOH A 136 736 189 HOH HOH . F 5 HOH A 137 737 167 HOH HOH . F 5 HOH A 138 738 14 HOH HOH . F 5 HOH A 139 739 28 HOH HOH . F 5 HOH A 140 740 194 HOH HOH . F 5 HOH A 141 741 193 HOH HOH . F 5 HOH A 142 742 37 HOH HOH . F 5 HOH A 143 743 51 HOH HOH . F 5 HOH A 144 744 134 HOH HOH . F 5 HOH A 145 745 100 HOH HOH . F 5 HOH A 146 746 92 HOH HOH . F 5 HOH A 147 747 116 HOH HOH . F 5 HOH A 148 748 35 HOH HOH . F 5 HOH A 149 749 205 HOH HOH . F 5 HOH A 150 750 149 HOH HOH . F 5 HOH A 151 751 201 HOH HOH . F 5 HOH A 152 752 39 HOH HOH . F 5 HOH A 153 753 47 HOH HOH . F 5 HOH A 154 754 49 HOH HOH . F 5 HOH A 155 755 96 HOH HOH . F 5 HOH A 156 756 140 HOH HOH . F 5 HOH A 157 757 115 HOH HOH . F 5 HOH A 158 758 85 HOH HOH . F 5 HOH A 159 759 45 HOH HOH . F 5 HOH A 160 760 23 HOH HOH . F 5 HOH A 161 761 180 HOH HOH . F 5 HOH A 162 762 91 HOH HOH . F 5 HOH A 163 763 227 HOH HOH . F 5 HOH A 164 764 24 HOH HOH . F 5 HOH A 165 765 72 HOH HOH . F 5 HOH A 166 766 89 HOH HOH . F 5 HOH A 167 767 108 HOH HOH . F 5 HOH A 168 768 164 HOH HOH . F 5 HOH A 169 769 207 HOH HOH . F 5 HOH A 170 770 183 HOH HOH . F 5 HOH A 171 771 190 HOH HOH . F 5 HOH A 172 772 212 HOH HOH . F 5 HOH A 173 773 191 HOH HOH . F 5 HOH A 174 774 74 HOH HOH . F 5 HOH A 175 775 218 HOH HOH . F 5 HOH A 176 776 81 HOH HOH . F 5 HOH A 177 777 171 HOH HOH . F 5 HOH A 178 778 129 HOH HOH . F 5 HOH A 179 779 214 HOH HOH . F 5 HOH A 180 780 25 HOH HOH . F 5 HOH A 181 781 82 HOH HOH . F 5 HOH A 182 782 173 HOH HOH . F 5 HOH A 183 783 211 HOH HOH . F 5 HOH A 184 784 197 HOH HOH . F 5 HOH A 185 785 121 HOH HOH . F 5 HOH A 186 786 168 HOH HOH . F 5 HOH A 187 787 136 HOH HOH . F 5 HOH A 188 788 135 HOH HOH . F 5 HOH A 189 789 206 HOH HOH . F 5 HOH A 190 790 228 HOH HOH . F 5 HOH A 191 791 141 HOH HOH . F 5 HOH A 192 792 165 HOH HOH . F 5 HOH A 193 793 67 HOH HOH . F 5 HOH A 194 794 210 HOH HOH . F 5 HOH A 195 795 120 HOH HOH . F 5 HOH A 196 796 169 HOH HOH . F 5 HOH A 197 797 127 HOH HOH . F 5 HOH A 198 798 215 HOH HOH . F 5 HOH A 199 799 123 HOH HOH . F 5 HOH A 200 800 225 HOH HOH . F 5 HOH A 201 801 90 HOH HOH . F 5 HOH A 202 802 224 HOH HOH . F 5 HOH A 203 803 144 HOH HOH . F 5 HOH A 204 804 226 HOH HOH . F 5 HOH A 205 805 174 HOH HOH . F 5 HOH A 206 806 87 HOH HOH . F 5 HOH A 207 807 166 HOH HOH . F 5 HOH A 208 808 192 HOH HOH . F 5 HOH A 209 809 202 HOH HOH . F 5 HOH A 210 810 122 HOH HOH . F 5 HOH A 211 811 213 HOH HOH . F 5 HOH A 212 812 143 HOH HOH . F 5 HOH A 213 813 220 HOH HOH . F 5 HOH A 214 814 73 HOH HOH . F 5 HOH A 215 815 102 HOH HOH . F 5 HOH A 216 816 217 HOH HOH . F 5 HOH A 217 817 128 HOH HOH . F 5 HOH A 218 818 200 HOH HOH . F 5 HOH A 219 819 156 HOH HOH . F 5 HOH A 220 820 157 HOH HOH . F 5 HOH A 221 821 131 HOH HOH . F 5 HOH A 222 822 187 HOH HOH . F 5 HOH A 223 823 160 HOH HOH . F 5 HOH A 224 824 158 HOH HOH . F 5 HOH A 225 825 55 HOH HOH . F 5 HOH A 226 826 216 HOH HOH . F 5 HOH A 227 827 229 HOH HOH . F 5 HOH A 228 828 181 HOH HOH . F 5 HOH A 229 829 75 HOH HOH . F 5 HOH A 230 830 223 HOH HOH . F 5 HOH A 231 831 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . D 3 -16.181 47.192 23.032 1 62.06 ? O1 PG4 503 A 1 HETATM 2 C C1 PG4 . . . D 3 -14.803 47.464 23.107 1 48.19 ? C1 PG4 503 A 1 HETATM 3 C C2 PG4 . . . D 3 -14.182 46.737 24.316 1 57.27 ? C2 PG4 503 A 1 HETATM 4 O O2 PG4 . . . D 3 -14.12 45.334 24.169 1 51.59 ? O2 PG4 503 A 1 HETATM 5 C C3 PG4 . . . D 3 -14.39 44.611 25.352 1 53.47 ? C3 PG4 503 A 1 HETATM 6 C C4 PG4 . . . D 3 -13.705 43.228 25.35 1 43.21 ? C4 PG4 503 A 1 HETATM 7 O O3 PG4 . . . D 3 -13.707 42.626 24.076 1 46.21 ? O3 PG4 503 A 1 HETATM 8 C C5 PG4 . . . D 3 -14.365 41.389 23.981 1 41.99 ? C5 PG4 503 A 1 HETATM 9 C C6 PG4 . . . D 3 -14.347 40.941 22.523 1 43.69 ? C6 PG4 503 A 1 HETATM 10 O O4 PG4 . . . D 3 -15.644 40.575 22.136 1 55.66 ? O4 PG4 503 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 10 #