data_5NXM # _model_server_result.job_id UIn3r89OBEAgTdFdvuljoA _model_server_result.datetime_utc '2024-11-17 12:50:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nxm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5NXM # _exptl.entry_id 5NXM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.36 _cell.angle_gamma 90 _cell.entry_id 5NXM _cell.length_a 42.151 _cell.length_b 41.139 _cell.length_c 72.214 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NXM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 92 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc2 A NE2 HIS 94 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc3 A ND1 HIS 117 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C N18 RA5 . A RA5 302 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.98 ? metalc ? metalc5 B ZN ZN . A ZN 301 1_555 C N18 RA5 . A RA5 302 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.991 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5NXM _atom_sites.fract_transf_matrix[1][1] 0.023724 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006075 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024308 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014295 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 301 ZN ZN . C 3 RA5 A 1 302 1 RA5 RA5 . D 4 HOH A 1 401 107 HOH HOH . D 4 HOH A 2 402 637 HOH HOH . D 4 HOH A 3 403 578 HOH HOH . D 4 HOH A 4 404 489 HOH HOH . D 4 HOH A 5 405 32 HOH HOH . D 4 HOH A 6 406 638 HOH HOH . D 4 HOH A 7 407 408 HOH HOH . D 4 HOH A 8 408 500 HOH HOH . D 4 HOH A 9 409 84 HOH HOH . D 4 HOH A 10 410 451 HOH HOH . D 4 HOH A 11 411 654 HOH HOH . D 4 HOH A 12 412 580 HOH HOH . D 4 HOH A 13 413 600 HOH HOH . D 4 HOH A 14 414 441 HOH HOH . D 4 HOH A 15 415 647 HOH HOH . D 4 HOH A 16 416 445 HOH HOH . D 4 HOH A 17 417 624 HOH HOH . D 4 HOH A 18 418 45 HOH HOH . D 4 HOH A 19 419 641 HOH HOH . D 4 HOH A 20 420 51 HOH HOH . D 4 HOH A 21 421 36 HOH HOH . D 4 HOH A 22 422 583 HOH HOH . D 4 HOH A 23 423 22 HOH HOH . D 4 HOH A 24 424 100 HOH HOH . D 4 HOH A 25 425 4 HOH HOH . D 4 HOH A 26 426 479 HOH HOH . D 4 HOH A 27 427 494 HOH HOH . D 4 HOH A 28 428 655 HOH HOH . D 4 HOH A 29 429 588 HOH HOH . D 4 HOH A 30 430 29 HOH HOH . D 4 HOH A 31 431 586 HOH HOH . D 4 HOH A 32 432 518 HOH HOH . D 4 HOH A 33 433 426 HOH HOH . D 4 HOH A 34 434 589 HOH HOH . D 4 HOH A 35 435 54 HOH HOH . D 4 HOH A 36 436 498 HOH HOH . D 4 HOH A 37 437 49 HOH HOH . D 4 HOH A 38 438 424 HOH HOH . D 4 HOH A 39 439 571 HOH HOH . D 4 HOH A 40 440 616 HOH HOH . D 4 HOH A 41 441 429 HOH HOH . D 4 HOH A 42 442 493 HOH HOH . D 4 HOH A 43 443 411 HOH HOH . D 4 HOH A 44 444 561 HOH HOH . D 4 HOH A 45 445 80 HOH HOH . D 4 HOH A 46 446 460 HOH HOH . D 4 HOH A 47 447 454 HOH HOH . D 4 HOH A 48 448 549 HOH HOH . D 4 HOH A 49 449 61 HOH HOH . D 4 HOH A 50 450 416 HOH HOH . D 4 HOH A 51 451 55 HOH HOH . D 4 HOH A 52 452 15 HOH HOH . D 4 HOH A 53 453 611 HOH HOH . D 4 HOH A 54 454 557 HOH HOH . D 4 HOH A 55 455 484 HOH HOH . D 4 HOH A 56 456 487 HOH HOH . D 4 HOH A 57 457 598 HOH HOH . D 4 HOH A 58 458 576 HOH HOH . D 4 HOH A 59 459 415 HOH HOH . D 4 HOH A 60 460 472 HOH HOH . D 4 HOH A 61 461 492 HOH HOH . D 4 HOH A 62 462 496 HOH HOH . D 4 HOH A 63 463 421 HOH HOH . D 4 HOH A 64 464 452 HOH HOH . D 4 HOH A 65 465 419 HOH HOH . D 4 HOH A 66 466 630 HOH HOH . D 4 HOH A 67 467 526 HOH HOH . D 4 HOH A 68 468 591 HOH HOH . D 4 HOH A 69 469 28 HOH HOH . D 4 HOH A 70 470 457 HOH HOH . D 4 HOH A 71 471 563 HOH HOH . D 4 HOH A 72 472 6 HOH HOH . D 4 HOH A 73 473 499 HOH HOH . D 4 HOH A 74 474 407 HOH HOH . D 4 HOH A 75 475 468 HOH HOH . D 4 HOH A 76 476 463 HOH HOH . D 4 HOH A 77 477 71 HOH HOH . D 4 HOH A 78 478 477 HOH HOH . D 4 HOH A 79 479 3 HOH HOH . D 4 HOH A 80 480 486 HOH HOH . D 4 HOH A 81 481 33 HOH HOH . D 4 HOH A 82 482 42 HOH HOH . D 4 HOH A 83 483 461 HOH HOH . D 4 HOH A 84 484 418 HOH HOH . D 4 HOH A 85 485 539 HOH HOH . D 4 HOH A 86 486 404 HOH HOH . D 4 HOH A 87 487 12 HOH HOH . D 4 HOH A 88 488 437 HOH HOH . D 4 HOH A 89 489 410 HOH HOH . D 4 HOH A 90 490 651 HOH HOH . D 4 HOH A 91 491 409 HOH HOH . D 4 HOH A 92 492 626 HOH HOH . D 4 HOH A 93 493 447 HOH HOH . D 4 HOH A 94 494 453 HOH HOH . D 4 HOH A 95 495 504 HOH HOH . D 4 HOH A 96 496 403 HOH HOH . D 4 HOH A 97 497 509 HOH HOH . D 4 HOH A 98 498 449 HOH HOH . D 4 HOH A 99 499 476 HOH HOH . D 4 HOH A 100 500 103 HOH HOH . D 4 HOH A 101 501 507 HOH HOH . D 4 HOH A 102 502 473 HOH HOH . D 4 HOH A 103 503 502 HOH HOH . D 4 HOH A 104 504 559 HOH HOH . D 4 HOH A 105 505 465 HOH HOH . D 4 HOH A 106 506 433 HOH HOH . D 4 HOH A 107 507 516 HOH HOH . D 4 HOH A 108 508 428 HOH HOH . D 4 HOH A 109 509 439 HOH HOH . D 4 HOH A 110 510 76 HOH HOH . D 4 HOH A 111 511 60 HOH HOH . D 4 HOH A 112 512 401 HOH HOH . D 4 HOH A 113 513 521 HOH HOH . D 4 HOH A 114 514 481 HOH HOH . D 4 HOH A 115 515 402 HOH HOH . D 4 HOH A 116 516 474 HOH HOH . D 4 HOH A 117 517 501 HOH HOH . D 4 HOH A 118 518 597 HOH HOH . D 4 HOH A 119 519 552 HOH HOH . D 4 HOH A 120 520 650 HOH HOH . D 4 HOH A 121 521 94 HOH HOH . D 4 HOH A 122 522 414 HOH HOH . D 4 HOH A 123 523 442 HOH HOH . D 4 HOH A 124 524 530 HOH HOH . D 4 HOH A 125 525 43 HOH HOH . D 4 HOH A 126 526 420 HOH HOH . D 4 HOH A 127 527 648 HOH HOH . D 4 HOH A 128 528 40 HOH HOH . D 4 HOH A 129 529 438 HOH HOH . D 4 HOH A 130 530 435 HOH HOH . D 4 HOH A 131 531 469 HOH HOH . D 4 HOH A 132 532 599 HOH HOH . D 4 HOH A 133 533 467 HOH HOH . D 4 HOH A 134 534 46 HOH HOH . D 4 HOH A 135 535 485 HOH HOH . D 4 HOH A 136 536 610 HOH HOH . D 4 HOH A 137 537 546 HOH HOH . D 4 HOH A 138 538 623 HOH HOH . D 4 HOH A 139 539 646 HOH HOH . D 4 HOH A 140 540 432 HOH HOH . D 4 HOH A 141 541 495 HOH HOH . D 4 HOH A 142 542 34 HOH HOH . D 4 HOH A 143 543 458 HOH HOH . D 4 HOH A 144 544 548 HOH HOH . D 4 HOH A 145 545 537 HOH HOH . D 4 HOH A 146 546 79 HOH HOH . D 4 HOH A 147 547 551 HOH HOH . D 4 HOH A 148 548 462 HOH HOH . D 4 HOH A 149 549 490 HOH HOH . D 4 HOH A 150 550 466 HOH HOH . D 4 HOH A 151 551 590 HOH HOH . D 4 HOH A 152 552 470 HOH HOH . D 4 HOH A 153 553 95 HOH HOH . D 4 HOH A 154 554 108 HOH HOH . D 4 HOH A 155 555 592 HOH HOH . D 4 HOH A 156 556 109 HOH HOH . D 4 HOH A 157 557 605 HOH HOH . D 4 HOH A 158 558 417 HOH HOH . D 4 HOH A 159 559 536 HOH HOH . D 4 HOH A 160 560 633 HOH HOH . D 4 HOH A 161 561 545 HOH HOH . D 4 HOH A 162 562 503 HOH HOH . D 4 HOH A 163 563 427 HOH HOH . D 4 HOH A 164 564 62 HOH HOH . D 4 HOH A 165 565 564 HOH HOH . D 4 HOH A 166 566 607 HOH HOH . D 4 HOH A 167 567 525 HOH HOH . D 4 HOH A 168 568 431 HOH HOH . D 4 HOH A 169 569 480 HOH HOH . D 4 HOH A 170 570 510 HOH HOH . D 4 HOH A 171 571 53 HOH HOH . D 4 HOH A 172 572 534 HOH HOH . D 4 HOH A 173 573 459 HOH HOH . D 4 HOH A 174 574 106 HOH HOH . D 4 HOH A 175 575 77 HOH HOH . D 4 HOH A 176 576 48 HOH HOH . D 4 HOH A 177 577 31 HOH HOH . D 4 HOH A 178 578 595 HOH HOH . D 4 HOH A 179 579 13 HOH HOH . D 4 HOH A 180 580 5 HOH HOH . D 4 HOH A 181 581 527 HOH HOH . D 4 HOH A 182 582 102 HOH HOH . D 4 HOH A 183 583 506 HOH HOH . D 4 HOH A 184 584 412 HOH HOH . D 4 HOH A 185 585 603 HOH HOH . D 4 HOH A 186 586 9 HOH HOH . D 4 HOH A 187 587 425 HOH HOH . D 4 HOH A 188 588 423 HOH HOH . D 4 HOH A 189 589 625 HOH HOH . D 4 HOH A 190 590 587 HOH HOH . D 4 HOH A 191 591 515 HOH HOH . D 4 HOH A 192 592 621 HOH HOH . D 4 HOH A 193 593 566 HOH HOH . D 4 HOH A 194 594 618 HOH HOH . D 4 HOH A 195 595 601 HOH HOH . D 4 HOH A 196 596 81 HOH HOH . D 4 HOH A 197 597 606 HOH HOH . D 4 HOH A 198 598 579 HOH HOH . D 4 HOH A 199 599 519 HOH HOH . D 4 HOH A 200 600 41 HOH HOH . D 4 HOH A 201 601 406 HOH HOH . D 4 HOH A 202 602 86 HOH HOH . D 4 HOH A 203 603 538 HOH HOH . D 4 HOH A 204 604 446 HOH HOH . D 4 HOH A 205 605 558 HOH HOH . D 4 HOH A 206 606 434 HOH HOH . D 4 HOH A 207 607 413 HOH HOH . D 4 HOH A 208 608 422 HOH HOH . D 4 HOH A 209 609 582 HOH HOH . D 4 HOH A 210 610 78 HOH HOH . D 4 HOH A 211 611 542 HOH HOH . D 4 HOH A 212 612 593 HOH HOH . D 4 HOH A 213 613 528 HOH HOH . D 4 HOH A 214 614 475 HOH HOH . D 4 HOH A 215 615 529 HOH HOH . D 4 HOH A 216 616 56 HOH HOH . D 4 HOH A 217 617 556 HOH HOH . D 4 HOH A 218 618 581 HOH HOH . D 4 HOH A 219 619 18 HOH HOH . D 4 HOH A 220 620 38 HOH HOH . D 4 HOH A 221 621 520 HOH HOH . D 4 HOH A 222 622 8 HOH HOH . D 4 HOH A 223 623 448 HOH HOH . D 4 HOH A 224 624 573 HOH HOH . D 4 HOH A 225 625 541 HOH HOH . D 4 HOH A 226 626 617 HOH HOH . D 4 HOH A 227 627 505 HOH HOH . D 4 HOH A 228 628 455 HOH HOH . D 4 HOH A 229 629 653 HOH HOH . D 4 HOH A 230 630 604 HOH HOH . D 4 HOH A 231 631 64 HOH HOH . D 4 HOH A 232 632 543 HOH HOH . D 4 HOH A 233 633 535 HOH HOH . D 4 HOH A 234 634 508 HOH HOH . D 4 HOH A 235 635 50 HOH HOH . D 4 HOH A 236 636 531 HOH HOH . D 4 HOH A 237 637 568 HOH HOH . D 4 HOH A 238 638 652 HOH HOH . D 4 HOH A 239 639 602 HOH HOH . D 4 HOH A 240 640 483 HOH HOH . D 4 HOH A 241 641 20 HOH HOH . D 4 HOH A 242 642 85 HOH HOH . D 4 HOH A 243 643 26 HOH HOH . D 4 HOH A 244 644 657 HOH HOH . D 4 HOH A 245 645 594 HOH HOH . D 4 HOH A 246 646 39 HOH HOH . D 4 HOH A 247 647 570 HOH HOH . D 4 HOH A 248 648 65 HOH HOH . D 4 HOH A 249 649 628 HOH HOH . D 4 HOH A 250 650 631 HOH HOH . D 4 HOH A 251 651 444 HOH HOH . D 4 HOH A 252 652 488 HOH HOH . D 4 HOH A 253 653 88 HOH HOH . D 4 HOH A 254 654 111 HOH HOH . D 4 HOH A 255 655 613 HOH HOH . D 4 HOH A 256 656 44 HOH HOH . D 4 HOH A 257 657 24 HOH HOH . D 4 HOH A 258 658 478 HOH HOH . D 4 HOH A 259 659 522 HOH HOH . D 4 HOH A 260 660 575 HOH HOH . D 4 HOH A 261 661 514 HOH HOH . D 4 HOH A 262 662 565 HOH HOH . D 4 HOH A 263 663 35 HOH HOH . D 4 HOH A 264 664 629 HOH HOH . D 4 HOH A 265 665 491 HOH HOH . D 4 HOH A 266 666 430 HOH HOH . D 4 HOH A 267 667 436 HOH HOH . D 4 HOH A 268 668 532 HOH HOH . D 4 HOH A 269 669 63 HOH HOH . D 4 HOH A 270 670 57 HOH HOH . D 4 HOH A 271 671 574 HOH HOH . D 4 HOH A 272 672 635 HOH HOH . D 4 HOH A 273 673 23 HOH HOH . D 4 HOH A 274 674 101 HOH HOH . D 4 HOH A 275 675 533 HOH HOH . D 4 HOH A 276 676 25 HOH HOH . D 4 HOH A 277 677 572 HOH HOH . D 4 HOH A 278 678 482 HOH HOH . D 4 HOH A 279 679 74 HOH HOH . D 4 HOH A 280 680 99 HOH HOH . D 4 HOH A 281 681 96 HOH HOH . D 4 HOH A 282 682 642 HOH HOH . D 4 HOH A 283 683 450 HOH HOH . D 4 HOH A 284 684 649 HOH HOH . D 4 HOH A 285 685 97 HOH HOH . D 4 HOH A 286 686 639 HOH HOH . D 4 HOH A 287 687 471 HOH HOH . D 4 HOH A 288 688 47 HOH HOH . D 4 HOH A 289 689 567 HOH HOH . D 4 HOH A 290 690 517 HOH HOH . D 4 HOH A 291 691 440 HOH HOH . D 4 HOH A 292 692 21 HOH HOH . D 4 HOH A 293 693 612 HOH HOH . D 4 HOH A 294 694 58 HOH HOH . D 4 HOH A 295 695 645 HOH HOH . D 4 HOH A 296 696 91 HOH HOH . D 4 HOH A 297 697 59 HOH HOH . D 4 HOH A 298 698 67 HOH HOH . D 4 HOH A 299 699 73 HOH HOH . D 4 HOH A 300 700 69 HOH HOH . D 4 HOH A 301 701 93 HOH HOH . D 4 HOH A 302 702 497 HOH HOH . D 4 HOH A 303 703 569 HOH HOH . D 4 HOH A 304 704 632 HOH HOH . D 4 HOH A 305 705 37 HOH HOH . D 4 HOH A 306 706 609 HOH HOH . D 4 HOH A 307 707 553 HOH HOH . D 4 HOH A 308 708 90 HOH HOH . D 4 HOH A 309 709 562 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -6.754 _atom_site.Cartn_y 0.067 _atom_site.Cartn_z 15.336 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 6.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #