data_5NY7
#
_model_server_result.job_id            ETPhEO7mTir8w3tOsNl1ag 
_model_server_result.datetime_utc      '2024-10-28 02:31:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ny7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":304}' 
#
_entry.id    5NY7 
#
_exptl.entry_id    5NY7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.125 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5NY7 
_cell.length_a            75.249 
_cell.length_b            114.779 
_cell.length_c            65.363 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NY7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ILE 72 A ILE 52 1_555 A N CSD 73 A CSD 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? 
covale ? covale2 A C CSD 73 A CSD 53 1_555 A N ALA 74 A ALA 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.283 ? 
#
_chem_comp.formula           'C6 H6 N2 O' 
_chem_comp.formula_weight    122.125 
_chem_comp.id                NCA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 NCA doub 252 n y 
N1 C6 NCA sing 253 n y 
C2 C3 NCA sing 254 n y 
C2 H2 NCA sing 255 n n 
C3 C4 NCA doub 256 n y 
C3 C7 NCA sing 257 n n 
C4 C5 NCA sing 258 n y 
C4 H4 NCA sing 259 n n 
C5 C6 NCA doub 260 n y 
C5 H5 NCA sing 261 n n 
C6 H6 NCA sing 262 n n 
C7 O7 NCA doub 263 n n 
C7 N7 NCA sing 264 n n 
N7 HN71 NCA sing 265 n n 
N7 HN72 NCA sing 266 n n 
#
_atom_sites.entry_id                     5NY7 
_atom_sites.fract_transf_matrix[1][1]    0.013289 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008712 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015299 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 301 1 CL CL . 
C 3 NCA A 1 302 1 NCA NCA . 
D 3 NCA A 1 303 2 NCA NCA . 
E 3 NCA A 1 304 3 NCA NCA . 
F 4 HOH A 1 401 410 HOH HOH . 
F 4 HOH A 2 402 403 HOH HOH . 
F 4 HOH A 3 403 10 HOH HOH . 
F 4 HOH A 4 404 253 HOH HOH . 
F 4 HOH A 5 405 237 HOH HOH . 
F 4 HOH A 6 406 169 HOH HOH . 
F 4 HOH A 7 407 136 HOH HOH . 
F 4 HOH A 8 408 80 HOH HOH . 
F 4 HOH A 9 409 416 HOH HOH . 
F 4 HOH A 10 410 388 HOH HOH . 
F 4 HOH A 11 411 396 HOH HOH . 
F 4 HOH A 12 412 26 HOH HOH . 
F 4 HOH A 13 413 149 HOH HOH . 
F 4 HOH A 14 414 19 HOH HOH . 
F 4 HOH A 15 415 40 HOH HOH . 
F 4 HOH A 16 416 167 HOH HOH . 
F 4 HOH A 17 417 13 HOH HOH . 
F 4 HOH A 18 418 17 HOH HOH . 
F 4 HOH A 19 419 58 HOH HOH . 
F 4 HOH A 20 420 437 HOH HOH . 
F 4 HOH A 21 421 15 HOH HOH . 
F 4 HOH A 22 422 44 HOH HOH . 
F 4 HOH A 23 423 216 HOH HOH . 
F 4 HOH A 24 424 432 HOH HOH . 
F 4 HOH A 25 425 29 HOH HOH . 
F 4 HOH A 26 426 34 HOH HOH . 
F 4 HOH A 27 427 199 HOH HOH . 
F 4 HOH A 28 428 56 HOH HOH . 
F 4 HOH A 29 429 32 HOH HOH . 
F 4 HOH A 30 430 47 HOH HOH . 
F 4 HOH A 31 431 31 HOH HOH . 
F 4 HOH A 32 432 93 HOH HOH . 
F 4 HOH A 33 433 165 HOH HOH . 
F 4 HOH A 34 434 102 HOH HOH . 
F 4 HOH A 35 435 114 HOH HOH . 
F 4 HOH A 36 436 94 HOH HOH . 
F 4 HOH A 37 437 65 HOH HOH . 
F 4 HOH A 38 438 48 HOH HOH . 
F 4 HOH A 39 439 4 HOH HOH . 
F 4 HOH A 40 440 5 HOH HOH . 
F 4 HOH A 41 441 103 HOH HOH . 
F 4 HOH A 42 442 192 HOH HOH . 
F 4 HOH A 43 443 122 HOH HOH . 
F 4 HOH A 44 444 55 HOH HOH . 
F 4 HOH A 45 445 401 HOH HOH . 
F 4 HOH A 46 446 147 HOH HOH . 
F 4 HOH A 47 447 133 HOH HOH . 
F 4 HOH A 48 448 78 HOH HOH . 
F 4 HOH A 49 449 219 HOH HOH . 
F 4 HOH A 50 450 128 HOH HOH . 
F 4 HOH A 51 451 88 HOH HOH . 
F 4 HOH A 52 452 214 HOH HOH . 
F 4 HOH A 53 453 118 HOH HOH . 
F 4 HOH A 54 454 37 HOH HOH . 
F 4 HOH A 55 455 130 HOH HOH . 
F 4 HOH A 56 456 428 HOH HOH . 
F 4 HOH A 57 457 12 HOH HOH . 
F 4 HOH A 58 458 187 HOH HOH . 
F 4 HOH A 59 459 158 HOH HOH . 
F 4 HOH A 60 460 41 HOH HOH . 
F 4 HOH A 61 461 23 HOH HOH . 
F 4 HOH A 62 462 61 HOH HOH . 
F 4 HOH A 63 463 155 HOH HOH . 
F 4 HOH A 64 464 119 HOH HOH . 
F 4 HOH A 65 465 438 HOH HOH . 
F 4 HOH A 66 466 35 HOH HOH . 
F 4 HOH A 67 467 59 HOH HOH . 
F 4 HOH A 68 468 243 HOH HOH . 
F 4 HOH A 69 469 417 HOH HOH . 
F 4 HOH A 70 470 140 HOH HOH . 
F 4 HOH A 71 471 72 HOH HOH . 
F 4 HOH A 72 472 135 HOH HOH . 
F 4 HOH A 73 473 101 HOH HOH . 
F 4 HOH A 74 474 3 HOH HOH . 
F 4 HOH A 75 475 138 HOH HOH . 
F 4 HOH A 76 476 28 HOH HOH . 
F 4 HOH A 77 477 71 HOH HOH . 
F 4 HOH A 78 478 70 HOH HOH . 
F 4 HOH A 79 479 336 HOH HOH . 
F 4 HOH A 80 480 39 HOH HOH . 
F 4 HOH A 81 481 66 HOH HOH . 
F 4 HOH A 82 482 27 HOH HOH . 
F 4 HOH A 83 483 38 HOH HOH . 
F 4 HOH A 84 484 84 HOH HOH . 
F 4 HOH A 85 485 69 HOH HOH . 
F 4 HOH A 86 486 36 HOH HOH . 
F 4 HOH A 87 487 154 HOH HOH . 
F 4 HOH A 88 488 107 HOH HOH . 
F 4 HOH A 89 489 85 HOH HOH . 
F 4 HOH A 90 490 191 HOH HOH . 
F 4 HOH A 91 491 8 HOH HOH . 
F 4 HOH A 92 492 123 HOH HOH . 
F 4 HOH A 93 493 33 HOH HOH . 
F 4 HOH A 94 494 415 HOH HOH . 
F 4 HOH A 95 495 16 HOH HOH . 
F 4 HOH A 96 496 6 HOH HOH . 
F 4 HOH A 97 497 97 HOH HOH . 
F 4 HOH A 98 498 98 HOH HOH . 
F 4 HOH A 99 499 113 HOH HOH . 
F 4 HOH A 100 500 108 HOH HOH . 
F 4 HOH A 101 501 195 HOH HOH . 
F 4 HOH A 102 502 89 HOH HOH . 
F 4 HOH A 103 503 226 HOH HOH . 
F 4 HOH A 104 504 1 HOH HOH . 
F 4 HOH A 105 505 77 HOH HOH . 
F 4 HOH A 106 506 86 HOH HOH . 
F 4 HOH A 107 507 60 HOH HOH . 
F 4 HOH A 108 508 183 HOH HOH . 
F 4 HOH A 109 509 81 HOH HOH . 
F 4 HOH A 110 510 75 HOH HOH . 
F 4 HOH A 111 511 112 HOH HOH . 
F 4 HOH A 112 512 274 HOH HOH . 
F 4 HOH A 113 513 408 HOH HOH . 
F 4 HOH A 114 514 92 HOH HOH . 
F 4 HOH A 115 515 137 HOH HOH . 
F 4 HOH A 116 516 90 HOH HOH . 
F 4 HOH A 117 517 399 HOH HOH . 
F 4 HOH A 118 518 62 HOH HOH . 
F 4 HOH A 119 519 30 HOH HOH . 
F 4 HOH A 120 520 42 HOH HOH . 
F 4 HOH A 121 521 439 HOH HOH . 
F 4 HOH A 122 522 361 HOH HOH . 
F 4 HOH A 123 523 131 HOH HOH . 
F 4 HOH A 124 524 331 HOH HOH . 
F 4 HOH A 125 525 434 HOH HOH . 
F 4 HOH A 126 526 43 HOH HOH . 
F 4 HOH A 127 527 2 HOH HOH . 
F 4 HOH A 128 528 53 HOH HOH . 
F 4 HOH A 129 529 22 HOH HOH . 
F 4 HOH A 130 530 57 HOH HOH . 
F 4 HOH A 131 531 208 HOH HOH . 
F 4 HOH A 132 532 163 HOH HOH . 
F 4 HOH A 133 533 49 HOH HOH . 
F 4 HOH A 134 534 430 HOH HOH . 
F 4 HOH A 135 535 45 HOH HOH . 
F 4 HOH A 136 536 51 HOH HOH . 
F 4 HOH A 137 537 412 HOH HOH . 
F 4 HOH A 138 538 196 HOH HOH . 
F 4 HOH A 139 539 25 HOH HOH . 
F 4 HOH A 140 540 166 HOH HOH . 
F 4 HOH A 141 541 50 HOH HOH . 
F 4 HOH A 142 542 161 HOH HOH . 
F 4 HOH A 143 543 201 HOH HOH . 
F 4 HOH A 144 544 106 HOH HOH . 
F 4 HOH A 145 545 73 HOH HOH . 
F 4 HOH A 146 546 436 HOH HOH . 
F 4 HOH A 147 547 150 HOH HOH . 
F 4 HOH A 148 548 182 HOH HOH . 
F 4 HOH A 149 549 46 HOH HOH . 
F 4 HOH A 150 550 129 HOH HOH . 
F 4 HOH A 151 551 109 HOH HOH . 
F 4 HOH A 152 552 18 HOH HOH . 
F 4 HOH A 153 553 79 HOH HOH . 
F 4 HOH A 154 554 392 HOH HOH . 
F 4 HOH A 155 555 218 HOH HOH . 
F 4 HOH A 156 556 404 HOH HOH . 
F 4 HOH A 157 557 407 HOH HOH . 
F 4 HOH A 158 558 115 HOH HOH . 
F 4 HOH A 159 559 402 HOH HOH . 
F 4 HOH A 160 560 126 HOH HOH . 
F 4 HOH A 161 561 429 HOH HOH . 
F 4 HOH A 162 562 423 HOH HOH . 
F 4 HOH A 163 563 420 HOH HOH . 
F 4 HOH A 164 564 339 HOH HOH . 
F 4 HOH A 165 565 181 HOH HOH . 
F 4 HOH A 166 566 431 HOH HOH . 
F 4 HOH A 167 567 425 HOH HOH . 
F 4 HOH A 168 568 426 HOH HOH . 
F 4 HOH A 169 569 194 HOH HOH . 
F 4 HOH A 170 570 173 HOH HOH . 
F 4 HOH A 171 571 217 HOH HOH . 
F 4 HOH A 172 572 143 HOH HOH . 
F 4 HOH A 173 573 414 HOH HOH . 
F 4 HOH A 174 574 344 HOH HOH . 
F 4 HOH A 175 575 406 HOH HOH . 
F 4 HOH A 176 576 170 HOH HOH . 
F 4 HOH A 177 577 174 HOH HOH . 
F 4 HOH A 178 578 206 HOH HOH . 
F 4 HOH A 179 579 341 HOH HOH . 
F 4 HOH A 180 580 160 HOH HOH . 
F 4 HOH A 181 581 348 HOH HOH . 
F 4 HOH A 182 582 329 HOH HOH . 
F 4 HOH A 183 583 405 HOH HOH . 
F 4 HOH A 184 584 418 HOH HOH . 
F 4 HOH A 185 585 186 HOH HOH . 
F 4 HOH A 186 586 419 HOH HOH . 
F 4 HOH A 187 587 433 HOH HOH . 
F 4 HOH A 188 588 353 HOH HOH . 
F 4 HOH A 189 589 110 HOH HOH . 
F 4 HOH A 190 590 148 HOH HOH . 
F 4 HOH A 191 591 427 HOH HOH . 
F 4 HOH A 192 592 409 HOH HOH . 
F 4 HOH A 193 593 367 HOH HOH . 
F 4 HOH A 194 594 345 HOH HOH . 
F 4 HOH A 195 595 421 HOH HOH . 
F 4 HOH A 196 596 347 HOH HOH . 
F 4 HOH A 197 597 176 HOH HOH . 
F 4 HOH A 198 598 171 HOH HOH . 
F 4 HOH A 199 599 342 HOH HOH . 
F 4 HOH A 200 600 422 HOH HOH . 
F 4 HOH A 201 601 333 HOH HOH . 
F 4 HOH A 202 602 146 HOH HOH . 
F 4 HOH A 203 603 239 HOH HOH . 
F 4 HOH A 204 604 349 HOH HOH . 
F 4 HOH A 205 605 337 HOH HOH . 
F 4 HOH A 206 606 145 HOH HOH . 
F 4 HOH A 207 607 205 HOH HOH . 
F 4 HOH A 208 608 164 HOH HOH . 
F 4 HOH A 209 609 252 HOH HOH . 
F 4 HOH A 210 610 152 HOH HOH . 
F 4 HOH A 211 611 117 HOH HOH . 
F 4 HOH A 212 612 424 HOH HOH . 
F 4 HOH A 213 613 225 HOH HOH . 
F 4 HOH A 214 614 210 HOH HOH . 
F 4 HOH A 215 615 435 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 NCA . . . E 3 9.658 15.187 27.876 1 35.45 ? N1 NCA 304 A 1 
HETATM 2 C C2 NCA . . . E 3 10.811 15.871 28.074 1 31.13 ? C2 NCA 304 A 1 
HETATM 3 C C3 NCA . . . E 3 10.915 16.791 29.154 1 33.64 ? C3 NCA 304 A 1 
HETATM 4 C C4 NCA . . . E 3 9.827 16.936 30.02 1 27.17 ? C4 NCA 304 A 1 
HETATM 5 C C5 NCA . . . E 3 8.718 16.184 29.795 1 33.78 ? C5 NCA 304 A 1 
HETATM 6 C C6 NCA . . . E 3 8.634 15.347 28.686 1 33.59 ? C6 NCA 304 A 1 
HETATM 7 C C7 NCA . . . E 3 12.128 17.62 29.383 1 29.32 ? C7 NCA 304 A 1 
HETATM 8 O O7 NCA . . . E 3 12.227 18.218 30.405 1 26.41 ? O7 NCA 304 A 1 
HETATM 9 N N7 NCA . . . E 3 13.121 17.843 28.51 1 25.02 ? N7 NCA 304 A 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           251 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           9 
#