data_5NYO
#
_model_server_result.job_id            '_rsMpSrHhDCAQOOSgu_H1w' 
_model_server_result.datetime_utc      '2024-12-21 16:21:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nyo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    5NYO 
#
_exptl.entry_id    5NYO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5NYO 
_cell.length_a            62.547 
_cell.length_b            62.547 
_cell.length_c            138.415 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NYO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             42 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              42 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             42 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              42 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.036 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 290 n n 
S O2 SO4 doub 291 n n 
S O3 SO4 sing 292 n n 
S O4 SO4 sing 293 n n 
#
_atom_sites.entry_id                     5NYO 
_atom_sites.fract_transf_matrix[1][1]    0.015988 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015988 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007225 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 201 2 SO4 SO4 . 
D 2 SO4 B 1 201 1 SO4 SO4 . 
E 3 HOH A 1 301 20 HOH HOH . 
E 3 HOH A 2 302 75 HOH HOH . 
E 3 HOH A 3 303 78 HOH HOH . 
E 3 HOH A 4 304 53 HOH HOH . 
E 3 HOH A 5 305 25 HOH HOH . 
E 3 HOH A 6 306 51 HOH HOH . 
E 3 HOH A 7 307 40 HOH HOH . 
E 3 HOH A 8 308 23 HOH HOH . 
E 3 HOH A 9 309 54 HOH HOH . 
E 3 HOH A 10 310 31 HOH HOH . 
E 3 HOH A 11 311 74 HOH HOH . 
E 3 HOH A 12 312 93 HOH HOH . 
E 3 HOH A 13 313 62 HOH HOH . 
E 3 HOH A 14 314 3 HOH HOH . 
E 3 HOH A 15 315 82 HOH HOH . 
E 3 HOH A 16 316 22 HOH HOH . 
E 3 HOH A 17 317 58 HOH HOH . 
E 3 HOH A 18 318 21 HOH HOH . 
E 3 HOH A 19 319 14 HOH HOH . 
E 3 HOH A 20 320 26 HOH HOH . 
E 3 HOH A 21 321 19 HOH HOH . 
E 3 HOH A 22 322 34 HOH HOH . 
E 3 HOH A 23 323 70 HOH HOH . 
E 3 HOH A 24 324 77 HOH HOH . 
E 3 HOH A 25 325 41 HOH HOH . 
E 3 HOH A 26 326 15 HOH HOH . 
E 3 HOH A 27 327 42 HOH HOH . 
E 3 HOH A 28 328 45 HOH HOH . 
E 3 HOH A 29 329 17 HOH HOH . 
E 3 HOH A 30 330 7 HOH HOH . 
E 3 HOH A 31 331 8 HOH HOH . 
E 3 HOH A 32 332 73 HOH HOH . 
E 3 HOH A 33 333 106 HOH HOH . 
E 3 HOH A 34 334 101 HOH HOH . 
E 3 HOH A 35 335 50 HOH HOH . 
E 3 HOH A 36 336 2 HOH HOH . 
E 3 HOH A 37 337 46 HOH HOH . 
E 3 HOH A 38 338 37 HOH HOH . 
E 3 HOH A 39 339 38 HOH HOH . 
E 3 HOH A 40 340 52 HOH HOH . 
E 3 HOH A 41 341 11 HOH HOH . 
E 3 HOH A 42 342 100 HOH HOH . 
E 3 HOH A 43 343 94 HOH HOH . 
E 3 HOH A 44 344 10 HOH HOH . 
E 3 HOH A 45 345 84 HOH HOH . 
E 3 HOH A 46 346 39 HOH HOH . 
E 3 HOH A 47 347 30 HOH HOH . 
E 3 HOH A 48 348 55 HOH HOH . 
E 3 HOH A 49 349 35 HOH HOH . 
E 3 HOH A 50 350 66 HOH HOH . 
E 3 HOH A 51 351 36 HOH HOH . 
E 3 HOH A 52 352 61 HOH HOH . 
E 3 HOH A 53 353 105 HOH HOH . 
E 3 HOH A 54 354 96 HOH HOH . 
E 3 HOH A 55 355 99 HOH HOH . 
E 3 HOH A 56 356 81 HOH HOH . 
F 3 HOH B 1 301 60 HOH HOH . 
F 3 HOH B 2 302 65 HOH HOH . 
F 3 HOH B 3 303 69 HOH HOH . 
F 3 HOH B 4 304 98 HOH HOH . 
F 3 HOH B 5 305 90 HOH HOH . 
F 3 HOH B 6 306 5 HOH HOH . 
F 3 HOH B 7 307 16 HOH HOH . 
F 3 HOH B 8 308 47 HOH HOH . 
F 3 HOH B 9 309 44 HOH HOH . 
F 3 HOH B 10 310 27 HOH HOH . 
F 3 HOH B 11 311 12 HOH HOH . 
F 3 HOH B 12 312 56 HOH HOH . 
F 3 HOH B 13 313 85 HOH HOH . 
F 3 HOH B 14 314 49 HOH HOH . 
F 3 HOH B 15 315 76 HOH HOH . 
F 3 HOH B 16 316 92 HOH HOH . 
F 3 HOH B 17 317 33 HOH HOH . 
F 3 HOH B 18 318 95 HOH HOH . 
F 3 HOH B 19 319 79 HOH HOH . 
F 3 HOH B 20 320 89 HOH HOH . 
F 3 HOH B 21 321 43 HOH HOH . 
F 3 HOH B 22 322 9 HOH HOH . 
F 3 HOH B 23 323 24 HOH HOH . 
F 3 HOH B 24 324 28 HOH HOH . 
F 3 HOH B 25 325 13 HOH HOH . 
F 3 HOH B 26 326 4 HOH HOH . 
F 3 HOH B 27 327 64 HOH HOH . 
F 3 HOH B 28 328 102 HOH HOH . 
F 3 HOH B 29 329 57 HOH HOH . 
F 3 HOH B 30 330 18 HOH HOH . 
F 3 HOH B 31 331 91 HOH HOH . 
F 3 HOH B 32 332 63 HOH HOH . 
F 3 HOH B 33 333 67 HOH HOH . 
F 3 HOH B 34 334 29 HOH HOH . 
F 3 HOH B 35 335 80 HOH HOH . 
F 3 HOH B 36 336 83 HOH HOH . 
F 3 HOH B 37 337 72 HOH HOH . 
F 3 HOH B 38 338 6 HOH HOH . 
F 3 HOH B 39 339 48 HOH HOH . 
F 3 HOH B 40 340 32 HOH HOH . 
F 3 HOH B 41 341 87 HOH HOH . 
F 3 HOH B 42 342 86 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . D 2 -16.551 16.926 -1.009 1 102.23 ? S SO4 201 B 1 
HETATM 2 O O1 SO4 . . . D 2 -17.184 15.612 -1.145 1 103.36 ? O1 SO4 201 B 1 
HETATM 3 O O2 SO4 . . . D 2 -16.966 17.77 -2.137 1 102.03 ? O2 SO4 201 B 1 
HETATM 4 O O3 SO4 . . . D 2 -15.096 16.737 -1.002 1 102.12 ? O3 SO4 201 B 1 
HETATM 5 O O4 SO4 . . . D 2 -16.96 17.561 0.254 1 102.37 ? O4 SO4 201 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           33 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           345 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           5 
#