data_5O07 # _model_server_result.job_id oHx4HHjJ_v4P4YyE0jLF_A _model_server_result.datetime_utc '2024-11-21 18:12:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5o07 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5O07 # _exptl.entry_id 5O07 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 250.232 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(2-methyl-5-nitro-1H-imidazol-1-yl)ethyl sulfamate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.26 _cell.angle_gamma 90 _cell.entry_id 5O07 _cell.length_a 42.25 _cell.length_b 41.252 _cell.length_c 71.733 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O07 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C N1 1VQ . A 1VQ 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? # _chem_comp.formula 'C6 H10 N4 O5 S' _chem_comp.formula_weight 250.232 _chem_comp.id 1VQ _chem_comp.mon_nstd_flag . _chem_comp.name '2-(2-methyl-5-nitro-1H-imidazol-1-yl)ethyl sulfamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O5 N4 1VQ doub 1 n n O4 N4 1VQ sing 2 n n N4 C3 1VQ sing 3 n n C3 N2 1VQ sing 4 n y C3 C4 1VQ doub 5 n y C2 N2 1VQ sing 6 n n C2 C1 1VQ sing 7 n n N2 C5 1VQ sing 8 n y C4 N3 1VQ sing 9 n y C5 N3 1VQ doub 10 n y C5 C6 1VQ sing 11 n n C1 O3 1VQ sing 12 n n O3 S1 1VQ sing 13 n n N1 S1 1VQ sing 14 n n S1 O2 1VQ doub 15 n n S1 O1 1VQ doub 16 n n N1 H1 1VQ sing 17 n n N1 H2 1VQ sing 18 n n C1 H3 1VQ sing 19 n n C1 H4 1VQ sing 20 n n C2 H5 1VQ sing 21 n n C2 H6 1VQ sing 22 n n C4 H7 1VQ sing 23 n n C6 H8 1VQ sing 24 n n C6 H9 1VQ sing 25 n n C6 H10 1VQ sing 26 n n # _atom_sites.entry_id 5O07 _atom_sites.fract_transf_matrix[1][1] 0.023669 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006015 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024241 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014384 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 262 ZN ZN . C 3 1VQ A 1 302 300 1VQ 1VQ . D 4 HOH A 1 401 235 HOH HOH . D 4 HOH A 2 402 55 HOH HOH . D 4 HOH A 3 403 190 HOH HOH . D 4 HOH A 4 404 208 HOH HOH . D 4 HOH A 5 405 146 HOH HOH . D 4 HOH A 6 406 77 HOH HOH . D 4 HOH A 7 407 144 HOH HOH . D 4 HOH A 8 408 204 HOH HOH . D 4 HOH A 9 409 20 HOH HOH . D 4 HOH A 10 410 1 HOH HOH . D 4 HOH A 11 411 191 HOH HOH . D 4 HOH A 12 412 87 HOH HOH . D 4 HOH A 13 413 56 HOH HOH . D 4 HOH A 14 414 230 HOH HOH . D 4 HOH A 15 415 175 HOH HOH . D 4 HOH A 16 416 49 HOH HOH . D 4 HOH A 17 417 38 HOH HOH . D 4 HOH A 18 418 217 HOH HOH . D 4 HOH A 19 419 222 HOH HOH . D 4 HOH A 20 420 92 HOH HOH . D 4 HOH A 21 421 154 HOH HOH . D 4 HOH A 22 422 123 HOH HOH . D 4 HOH A 23 423 112 HOH HOH . D 4 HOH A 24 424 120 HOH HOH . D 4 HOH A 25 425 130 HOH HOH . D 4 HOH A 26 426 94 HOH HOH . D 4 HOH A 27 427 33 HOH HOH . D 4 HOH A 28 428 133 HOH HOH . D 4 HOH A 29 429 196 HOH HOH . D 4 HOH A 30 430 107 HOH HOH . D 4 HOH A 31 431 89 HOH HOH . D 4 HOH A 32 432 155 HOH HOH . D 4 HOH A 33 433 16 HOH HOH . D 4 HOH A 34 434 52 HOH HOH . D 4 HOH A 35 435 229 HOH HOH . D 4 HOH A 36 436 69 HOH HOH . D 4 HOH A 37 437 136 HOH HOH . D 4 HOH A 38 438 19 HOH HOH . D 4 HOH A 39 439 164 HOH HOH . D 4 HOH A 40 440 118 HOH HOH . D 4 HOH A 41 441 85 HOH HOH . D 4 HOH A 42 442 177 HOH HOH . D 4 HOH A 43 443 86 HOH HOH . D 4 HOH A 44 444 84 HOH HOH . D 4 HOH A 45 445 88 HOH HOH . D 4 HOH A 46 446 27 HOH HOH . D 4 HOH A 47 447 183 HOH HOH . D 4 HOH A 48 448 211 HOH HOH . D 4 HOH A 49 449 158 HOH HOH . D 4 HOH A 50 450 23 HOH HOH . D 4 HOH A 51 451 117 HOH HOH . D 4 HOH A 52 452 14 HOH HOH . D 4 HOH A 53 453 111 HOH HOH . D 4 HOH A 54 454 99 HOH HOH . D 4 HOH A 55 455 93 HOH HOH . D 4 HOH A 56 456 57 HOH HOH . D 4 HOH A 57 457 131 HOH HOH . D 4 HOH A 58 458 122 HOH HOH . D 4 HOH A 59 459 47 HOH HOH . D 4 HOH A 60 460 81 HOH HOH . D 4 HOH A 61 461 28 HOH HOH . D 4 HOH A 62 462 82 HOH HOH . D 4 HOH A 63 463 76 HOH HOH . D 4 HOH A 64 464 109 HOH HOH . D 4 HOH A 65 465 15 HOH HOH . D 4 HOH A 66 466 4 HOH HOH . D 4 HOH A 67 467 10 HOH HOH . D 4 HOH A 68 468 67 HOH HOH . D 4 HOH A 69 469 48 HOH HOH . D 4 HOH A 70 470 105 HOH HOH . D 4 HOH A 71 471 26 HOH HOH . D 4 HOH A 72 472 60 HOH HOH . D 4 HOH A 73 473 11 HOH HOH . D 4 HOH A 74 474 46 HOH HOH . D 4 HOH A 75 475 153 HOH HOH . D 4 HOH A 76 476 50 HOH HOH . D 4 HOH A 77 477 5 HOH HOH . D 4 HOH A 78 478 179 HOH HOH . D 4 HOH A 79 479 62 HOH HOH . D 4 HOH A 80 480 7 HOH HOH . D 4 HOH A 81 481 127 HOH HOH . D 4 HOH A 82 482 180 HOH HOH . D 4 HOH A 83 483 63 HOH HOH . D 4 HOH A 84 484 79 HOH HOH . D 4 HOH A 85 485 17 HOH HOH . D 4 HOH A 86 486 25 HOH HOH . D 4 HOH A 87 487 193 HOH HOH . D 4 HOH A 88 488 121 HOH HOH . D 4 HOH A 89 489 40 HOH HOH . D 4 HOH A 90 490 114 HOH HOH . D 4 HOH A 91 491 195 HOH HOH . D 4 HOH A 92 492 42 HOH HOH . D 4 HOH A 93 493 187 HOH HOH . D 4 HOH A 94 494 171 HOH HOH . D 4 HOH A 95 495 35 HOH HOH . D 4 HOH A 96 496 110 HOH HOH . D 4 HOH A 97 497 126 HOH HOH . D 4 HOH A 98 498 178 HOH HOH . D 4 HOH A 99 499 168 HOH HOH . D 4 HOH A 100 500 214 HOH HOH . D 4 HOH A 101 501 232 HOH HOH . D 4 HOH A 102 502 234 HOH HOH . D 4 HOH A 103 503 43 HOH HOH . D 4 HOH A 104 504 36 HOH HOH . D 4 HOH A 105 505 200 HOH HOH . D 4 HOH A 106 506 3 HOH HOH . D 4 HOH A 107 507 70 HOH HOH . D 4 HOH A 108 508 6 HOH HOH . D 4 HOH A 109 509 83 HOH HOH . D 4 HOH A 110 510 37 HOH HOH . D 4 HOH A 111 511 74 HOH HOH . D 4 HOH A 112 512 160 HOH HOH . D 4 HOH A 113 513 101 HOH HOH . D 4 HOH A 114 514 169 HOH HOH . D 4 HOH A 115 515 34 HOH HOH . D 4 HOH A 116 516 73 HOH HOH . D 4 HOH A 117 517 100 HOH HOH . D 4 HOH A 118 518 188 HOH HOH . D 4 HOH A 119 519 194 HOH HOH . D 4 HOH A 120 520 129 HOH HOH . D 4 HOH A 121 521 185 HOH HOH . D 4 HOH A 122 522 98 HOH HOH . D 4 HOH A 123 523 29 HOH HOH . D 4 HOH A 124 524 216 HOH HOH . D 4 HOH A 125 525 80 HOH HOH . D 4 HOH A 126 526 138 HOH HOH . D 4 HOH A 127 527 18 HOH HOH . D 4 HOH A 128 528 103 HOH HOH . D 4 HOH A 129 529 152 HOH HOH . D 4 HOH A 130 530 113 HOH HOH . D 4 HOH A 131 531 32 HOH HOH . D 4 HOH A 132 532 8 HOH HOH . D 4 HOH A 133 533 115 HOH HOH . D 4 HOH A 134 534 218 HOH HOH . D 4 HOH A 135 535 30 HOH HOH . D 4 HOH A 136 536 68 HOH HOH . D 4 HOH A 137 537 124 HOH HOH . D 4 HOH A 138 538 165 HOH HOH . D 4 HOH A 139 539 231 HOH HOH . D 4 HOH A 140 540 9 HOH HOH . D 4 HOH A 141 541 12 HOH HOH . D 4 HOH A 142 542 44 HOH HOH . D 4 HOH A 143 543 61 HOH HOH . D 4 HOH A 144 544 96 HOH HOH . D 4 HOH A 145 545 201 HOH HOH . D 4 HOH A 146 546 65 HOH HOH . D 4 HOH A 147 547 225 HOH HOH . D 4 HOH A 148 548 233 HOH HOH . D 4 HOH A 149 549 22 HOH HOH . D 4 HOH A 150 550 119 HOH HOH . D 4 HOH A 151 551 31 HOH HOH . D 4 HOH A 152 552 72 HOH HOH . D 4 HOH A 153 553 219 HOH HOH . D 4 HOH A 154 554 162 HOH HOH . D 4 HOH A 155 555 157 HOH HOH . D 4 HOH A 156 556 2 HOH HOH . D 4 HOH A 157 557 151 HOH HOH . D 4 HOH A 158 558 51 HOH HOH . D 4 HOH A 159 559 163 HOH HOH . D 4 HOH A 160 560 147 HOH HOH . D 4 HOH A 161 561 21 HOH HOH . D 4 HOH A 162 562 128 HOH HOH . D 4 HOH A 163 563 41 HOH HOH . D 4 HOH A 164 564 54 HOH HOH . D 4 HOH A 165 565 59 HOH HOH . D 4 HOH A 166 566 224 HOH HOH . D 4 HOH A 167 567 213 HOH HOH . D 4 HOH A 168 568 182 HOH HOH . D 4 HOH A 169 569 58 HOH HOH . D 4 HOH A 170 570 64 HOH HOH . D 4 HOH A 171 571 75 HOH HOH . D 4 HOH A 172 572 137 HOH HOH . D 4 HOH A 173 573 150 HOH HOH . D 4 HOH A 174 574 176 HOH HOH . D 4 HOH A 175 575 106 HOH HOH . D 4 HOH A 176 576 184 HOH HOH . D 4 HOH A 177 577 24 HOH HOH . D 4 HOH A 178 578 108 HOH HOH . D 4 HOH A 179 579 66 HOH HOH . D 4 HOH A 180 580 78 HOH HOH . D 4 HOH A 181 581 159 HOH HOH . D 4 HOH A 182 582 53 HOH HOH . D 4 HOH A 183 583 142 HOH HOH . D 4 HOH A 184 584 13 HOH HOH . D 4 HOH A 185 585 205 HOH HOH . D 4 HOH A 186 586 71 HOH HOH . D 4 HOH A 187 587 228 HOH HOH . D 4 HOH A 188 588 210 HOH HOH . D 4 HOH A 189 589 45 HOH HOH . D 4 HOH A 190 590 125 HOH HOH . D 4 HOH A 191 591 149 HOH HOH . D 4 HOH A 192 592 39 HOH HOH . D 4 HOH A 193 593 198 HOH HOH . D 4 HOH A 194 594 167 HOH HOH . D 4 HOH A 195 595 161 HOH HOH . D 4 HOH A 196 596 102 HOH HOH . D 4 HOH A 197 597 174 HOH HOH . D 4 HOH A 198 598 236 HOH HOH . D 4 HOH A 199 599 212 HOH HOH . D 4 HOH A 200 600 221 HOH HOH . D 4 HOH A 201 601 223 HOH HOH . D 4 HOH A 202 602 141 HOH HOH . D 4 HOH A 203 603 95 HOH HOH . D 4 HOH A 204 604 148 HOH HOH . D 4 HOH A 205 605 90 HOH HOH . D 4 HOH A 206 606 237 HOH HOH . D 4 HOH A 207 607 181 HOH HOH . D 4 HOH A 208 608 116 HOH HOH . D 4 HOH A 209 609 97 HOH HOH . D 4 HOH A 210 610 143 HOH HOH . D 4 HOH A 211 611 145 HOH HOH . D 4 HOH A 212 612 189 HOH HOH . D 4 HOH A 213 613 199 HOH HOH . D 4 HOH A 214 614 140 HOH HOH . D 4 HOH A 215 615 202 HOH HOH . D 4 HOH A 216 616 134 HOH HOH . D 4 HOH A 217 617 206 HOH HOH . D 4 HOH A 218 618 139 HOH HOH . D 4 HOH A 219 619 197 HOH HOH . D 4 HOH A 220 620 215 HOH HOH . D 4 HOH A 221 621 172 HOH HOH . D 4 HOH A 222 622 192 HOH HOH . D 4 HOH A 223 623 156 HOH HOH . D 4 HOH A 224 624 203 HOH HOH . D 4 HOH A 225 625 227 HOH HOH . D 4 HOH A 226 626 132 HOH HOH . D 4 HOH A 227 627 91 HOH HOH . D 4 HOH A 228 628 209 HOH HOH . D 4 HOH A 229 629 226 HOH HOH . D 4 HOH A 230 630 173 HOH HOH . D 4 HOH A 231 631 135 HOH HOH . D 4 HOH A 232 632 207 HOH HOH . D 4 HOH A 233 633 170 HOH HOH . D 4 HOH A 234 634 186 HOH HOH . D 4 HOH A 235 635 104 HOH HOH . D 4 HOH A 236 636 220 HOH HOH . D 4 HOH A 237 637 166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 1VQ . . . C 3 -5.699 1.003 16.526 1 8.07 ? S1 1VQ 302 A 1 HETATM 2 O O1 1VQ . . . C 3 -4.967 1.368 17.698 1 8.69 ? O1 1VQ 302 A 1 HETATM 3 O O2 1VQ . . . C 3 -7.127 1.102 16.531 1 7.47 ? O2 1VQ 302 A 1 HETATM 4 O O3 1VQ . . . C 3 -5.192 1.971 15.398 1 12.74 ? O3 1VQ 302 A 1 HETATM 5 N N1 1VQ . . . C 3 -5.284 -0.487 16.133 1 5.79 ? N1 1VQ 302 A 1 HETATM 6 C C1 1VQ . . . C 3 -3.897 1.741 14.768 1 15.06 ? C1 1VQ 302 A 1 HETATM 7 C C2 1VQ . . . C 3 -3.911 2.46 13.462 1 15.01 ? C2 1VQ 302 A 1 HETATM 8 N N3 1VQ . . . C 3 -3.486 6.036 13.932 1 20.16 ? N3 1VQ 302 A 1 HETATM 9 N N4 1VQ . . . C 3 -6.464 4.232 13.082 1 21.53 ? N4 1VQ 302 A 1 HETATM 10 C C3 1VQ . . . C 3 -5.185 4.692 13.46 1 20.12 ? C3 1VQ 302 A 1 HETATM 11 C C4 1VQ . . . C 3 -4.813 5.991 13.684 1 20.39 ? C4 1VQ 302 A 1 HETATM 12 C C5 1VQ . . . C 3 -3.046 4.794 13.865 1 18.36 ? C5 1VQ 302 A 1 HETATM 13 C C6 1VQ . . . C 3 -1.652 4.408 14.132 1 18.21 ? C6 1VQ 302 A 1 HETATM 14 N N2 1VQ . . . C 3 -4.049 3.917 13.587 1 17.12 ? N2 1VQ 302 A 1 HETATM 15 O O4 1VQ . . . C 3 -7.375 5.061 13.042 1 22.72 ? O4 1VQ 302 A 1 HETATM 16 O O5 1VQ . . . C 3 -6.61 3.068 12.718 1 24.72 ? O5 1VQ 302 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #