data_5O17 # _model_server_result.job_id OH3r-s2vGMN-k8fxWox8BQ _model_server_result.datetime_utc '2024-11-24 02:34:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5o17 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 5O17 # _exptl.entry_id 5O17 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5O17 _cell.length_a 88.01 _cell.length_b 88.01 _cell.length_c 113.49 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O17 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 62 A HIS 64 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc2 A NE2 HIS 94 A HIS 96 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 372 n n S O2 SO4 doub 373 n n S O3 SO4 sing 374 n n S O4 SO4 sing 375 n n # _atom_sites.entry_id 5O17 _atom_sites.fract_transf_matrix[1][1] 0.011362 _atom_sites.fract_transf_matrix[1][2] 0.00656 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01312 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008811 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 201 HEM HEM . C 3 SO4 A 1 202 202 SO4 SO4 . D 4 KR A 1 204 204 KR KR . E 4 KR A 1 205 205 KR KR . F 4 KR A 1 206 206 KR KR . G 4 KR A 1 210 210 KR KR . H 5 HOH A 1 301 421 HOH HOH . H 5 HOH A 2 302 422 HOH HOH . H 5 HOH A 3 303 423 HOH HOH . H 5 HOH A 4 304 329 HOH HOH . H 5 HOH A 5 305 427 HOH HOH . H 5 HOH A 6 306 426 HOH HOH . H 5 HOH A 7 307 391 HOH HOH . H 5 HOH A 8 308 340 HOH HOH . H 5 HOH A 9 309 425 HOH HOH . H 5 HOH A 10 310 390 HOH HOH . H 5 HOH A 11 311 416 HOH HOH . H 5 HOH A 12 312 358 HOH HOH . H 5 HOH A 13 313 315 HOH HOH . H 5 HOH A 14 314 330 HOH HOH . H 5 HOH A 15 315 321 HOH HOH . H 5 HOH A 16 316 344 HOH HOH . H 5 HOH A 17 317 398 HOH HOH . H 5 HOH A 18 318 392 HOH HOH . H 5 HOH A 19 319 387 HOH HOH . H 5 HOH A 20 320 312 HOH HOH . H 5 HOH A 21 321 339 HOH HOH . H 5 HOH A 22 322 353 HOH HOH . H 5 HOH A 23 323 368 HOH HOH . H 5 HOH A 24 324 331 HOH HOH . H 5 HOH A 25 325 313 HOH HOH . H 5 HOH A 26 326 349 HOH HOH . H 5 HOH A 27 327 303 HOH HOH . H 5 HOH A 28 328 346 HOH HOH . H 5 HOH A 29 329 364 HOH HOH . H 5 HOH A 30 330 332 HOH HOH . H 5 HOH A 31 331 394 HOH HOH . H 5 HOH A 32 332 366 HOH HOH . H 5 HOH A 33 333 314 HOH HOH . H 5 HOH A 34 334 327 HOH HOH . H 5 HOH A 35 335 342 HOH HOH . H 5 HOH A 36 336 371 HOH HOH . H 5 HOH A 37 337 301 HOH HOH . H 5 HOH A 38 338 302 HOH HOH . H 5 HOH A 39 339 414 HOH HOH . H 5 HOH A 40 340 309 HOH HOH . H 5 HOH A 41 341 399 HOH HOH . H 5 HOH A 42 342 404 HOH HOH . H 5 HOH A 43 343 305 HOH HOH . H 5 HOH A 44 344 355 HOH HOH . H 5 HOH A 45 345 361 HOH HOH . H 5 HOH A 46 346 320 HOH HOH . H 5 HOH A 47 347 311 HOH HOH . H 5 HOH A 48 348 317 HOH HOH . H 5 HOH A 49 349 322 HOH HOH . H 5 HOH A 50 350 377 HOH HOH . H 5 HOH A 51 351 337 HOH HOH . H 5 HOH A 52 352 395 HOH HOH . H 5 HOH A 53 353 372 HOH HOH . H 5 HOH A 54 354 389 HOH HOH . H 5 HOH A 55 355 345 HOH HOH . H 5 HOH A 56 356 307 HOH HOH . H 5 HOH A 57 357 341 HOH HOH . H 5 HOH A 58 358 338 HOH HOH . H 5 HOH A 59 359 367 HOH HOH . H 5 HOH A 60 360 396 HOH HOH . H 5 HOH A 61 361 357 HOH HOH . H 5 HOH A 62 362 304 HOH HOH . H 5 HOH A 63 363 415 HOH HOH . H 5 HOH A 64 364 310 HOH HOH . H 5 HOH A 65 365 308 HOH HOH . H 5 HOH A 66 366 375 HOH HOH . H 5 HOH A 67 367 326 HOH HOH . H 5 HOH A 68 368 400 HOH HOH . H 5 HOH A 69 369 418 HOH HOH . H 5 HOH A 70 370 306 HOH HOH . H 5 HOH A 71 371 348 HOH HOH . H 5 HOH A 72 372 393 HOH HOH . H 5 HOH A 73 373 316 HOH HOH . H 5 HOH A 74 374 359 HOH HOH . H 5 HOH A 75 375 318 HOH HOH . H 5 HOH A 76 376 397 HOH HOH . H 5 HOH A 77 377 370 HOH HOH . H 5 HOH A 78 378 324 HOH HOH . H 5 HOH A 79 379 380 HOH HOH . H 5 HOH A 80 380 333 HOH HOH . H 5 HOH A 81 381 401 HOH HOH . H 5 HOH A 82 382 325 HOH HOH . H 5 HOH A 83 383 408 HOH HOH . H 5 HOH A 84 384 405 HOH HOH . H 5 HOH A 85 385 419 HOH HOH . H 5 HOH A 86 386 352 HOH HOH . H 5 HOH A 87 387 350 HOH HOH . H 5 HOH A 88 388 374 HOH HOH . H 5 HOH A 89 389 328 HOH HOH . H 5 HOH A 90 390 354 HOH HOH . H 5 HOH A 91 391 385 HOH HOH . H 5 HOH A 92 392 417 HOH HOH . H 5 HOH A 93 393 410 HOH HOH . H 5 HOH A 94 394 388 HOH HOH . H 5 HOH A 95 395 382 HOH HOH . H 5 HOH A 96 396 428 HOH HOH . H 5 HOH A 97 397 365 HOH HOH . H 5 HOH A 98 398 378 HOH HOH . H 5 HOH A 99 399 363 HOH HOH . H 5 HOH A 100 400 343 HOH HOH . H 5 HOH A 101 401 412 HOH HOH . H 5 HOH A 102 402 409 HOH HOH . H 5 HOH A 103 403 373 HOH HOH . H 5 HOH A 104 404 335 HOH HOH . H 5 HOH A 105 405 411 HOH HOH . H 5 HOH A 106 406 319 HOH HOH . H 5 HOH A 107 407 379 HOH HOH . H 5 HOH A 108 408 381 HOH HOH . H 5 HOH A 109 409 424 HOH HOH . H 5 HOH A 110 410 386 HOH HOH . H 5 HOH A 111 411 403 HOH HOH . H 5 HOH A 112 412 402 HOH HOH . H 5 HOH A 113 413 351 HOH HOH . H 5 HOH A 114 414 347 HOH HOH . H 5 HOH A 115 415 406 HOH HOH . H 5 HOH A 116 416 407 HOH HOH . H 5 HOH A 117 417 420 HOH HOH . H 5 HOH A 118 418 323 HOH HOH . H 5 HOH A 119 419 334 HOH HOH . H 5 HOH A 120 420 360 HOH HOH . H 5 HOH A 121 421 383 HOH HOH . H 5 HOH A 122 422 362 HOH HOH . H 5 HOH A 123 423 413 HOH HOH . H 5 HOH A 124 424 376 HOH HOH . H 5 HOH A 125 425 369 HOH HOH . H 5 HOH A 126 426 384 HOH HOH . H 5 HOH A 127 427 356 HOH HOH . H 5 HOH A 128 428 336 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 27.828 49.109 22.015 0.65 15.73 ? S SO4 202 A 1 HETATM 2 O O1 SO4 . . . C 3 27.987 50.406 21.364 0.65 16.46 ? O1 SO4 202 A 1 HETATM 3 O O2 SO4 . . . C 3 28.943 48.209 21.566 0.65 16.57 ? O2 SO4 202 A 1 HETATM 4 O O3 SO4 . . . C 3 27.873 49.429 23.412 0.65 14.68 ? O3 SO4 202 A 1 HETATM 5 O O4 SO4 . . . C 3 26.544 48.413 21.611 0.65 15.1 ? O4 SO4 202 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #