data_5O1K
#
_model_server_result.job_id            pjXfEMNCW3tAaTFeTzSEPg 
_model_server_result.datetime_utc      '2024-11-24 03:57:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5o1k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":220}' 
#
_entry.id    5O1K 
#
_exptl.entry_id    5O1K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              88.105 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1,4-DIETHYLENE DIOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5O1K 
_cell.length_a            89.257 
_cell.length_b            89.257 
_cell.length_c            115.416 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5O1K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 62 A HIS 64 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc2 A NE2 HIS 94 A HIS 96 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.121 ? 
#
_chem_comp.formula           'C4 H8 O2' 
_chem_comp.formula_weight    88.105 
_chem_comp.id                DIO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1,4-DIETHYLENE DIOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C1' DIO sing 83 n n 
C1 O1 DIO sing 84 n n 
C1 H11 DIO sing 85 n n 
C1 H12 DIO sing 86 n n 
C2 C2' DIO sing 87 n n 
C2 O1 DIO sing 88 n n 
C2 H21 DIO sing 89 n n 
C2 H22 DIO sing 90 n n 
C1' O1' DIO sing 91 n n 
C1' "H1'1" DIO sing 92 n n 
C1' "H1'2" DIO sing 93 n n 
C2' O1' DIO sing 94 n n 
C2' "H2'1" DIO sing 95 n n 
C2' "H2'2" DIO sing 96 n n 
#
_atom_sites.entry_id                     5O1K 
_atom_sites.fract_transf_matrix[1][1]    0.011204 
_atom_sites.fract_transf_matrix[1][2]    0.006468 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012937 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008664 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 201 201 HEM HEM . 
C 3 SO4 A 1 202 202 SO4 SO4 . 
D 4 XE A 1 203 203 XE XE . 
E 4 XE A 1 204 204 XE XE . 
F 4 XE A 1 205 205 XE XE . 
G 4 XE A 1 206 206 XE XE . 
H 4 XE A 1 207 207 XE XE . 
I 4 XE A 1 208 208 XE XE . 
J 5 DIO A 1 220 220 DIO DIO . 
K 6 HOH A 1 301 350 HOH HOH . 
K 6 HOH A 2 302 318 HOH HOH . 
K 6 HOH A 3 303 316 HOH HOH . 
K 6 HOH A 4 304 345 HOH HOH . 
K 6 HOH A 5 305 312 HOH HOH . 
K 6 HOH A 6 306 307 HOH HOH . 
K 6 HOH A 7 307 333 HOH HOH . 
K 6 HOH A 8 308 325 HOH HOH . 
K 6 HOH A 9 309 332 HOH HOH . 
K 6 HOH A 10 310 321 HOH HOH . 
K 6 HOH A 11 311 301 HOH HOH . 
K 6 HOH A 12 312 309 HOH HOH . 
K 6 HOH A 13 313 331 HOH HOH . 
K 6 HOH A 14 314 322 HOH HOH . 
K 6 HOH A 15 315 323 HOH HOH . 
K 6 HOH A 16 316 308 HOH HOH . 
K 6 HOH A 17 317 310 HOH HOH . 
K 6 HOH A 18 318 342 HOH HOH . 
K 6 HOH A 19 319 306 HOH HOH . 
K 6 HOH A 20 320 320 HOH HOH . 
K 6 HOH A 21 321 336 HOH HOH . 
K 6 HOH A 22 322 335 HOH HOH . 
K 6 HOH A 23 323 303 HOH HOH . 
K 6 HOH A 24 324 334 HOH HOH . 
K 6 HOH A 25 325 317 HOH HOH . 
K 6 HOH A 26 326 302 HOH HOH . 
K 6 HOH A 27 327 340 HOH HOH . 
K 6 HOH A 28 328 330 HOH HOH . 
K 6 HOH A 29 329 319 HOH HOH . 
K 6 HOH A 30 330 326 HOH HOH . 
K 6 HOH A 31 331 352 HOH HOH . 
K 6 HOH A 32 332 324 HOH HOH . 
K 6 HOH A 33 333 304 HOH HOH . 
K 6 HOH A 34 334 314 HOH HOH . 
K 6 HOH A 35 335 346 HOH HOH . 
K 6 HOH A 36 336 351 HOH HOH . 
K 6 HOH A 37 337 343 HOH HOH . 
K 6 HOH A 38 338 305 HOH HOH . 
K 6 HOH A 39 339 315 HOH HOH . 
K 6 HOH A 40 340 344 HOH HOH . 
K 6 HOH A 41 341 329 HOH HOH . 
K 6 HOH A 42 342 338 HOH HOH . 
K 6 HOH A 43 343 313 HOH HOH . 
K 6 HOH A 44 344 348 HOH HOH . 
K 6 HOH A 45 345 337 HOH HOH . 
K 6 HOH A 46 346 341 HOH HOH . 
K 6 HOH A 47 347 328 HOH HOH . 
K 6 HOH A 48 348 327 HOH HOH . 
K 6 HOH A 49 349 311 HOH HOH . 
K 6 HOH A 50 350 349 HOH HOH . 
K 6 HOH A 51 351 339 HOH HOH . 
K 6 HOH A 52 352 347 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DIO . . . J 5 28.114 54.971 39.5 0.5 76.6 ? C1 DIO 220 A 1 
HETATM 2 C C2 DIO . . . J 5 27.595 54.689 37.228 0.5 75.68 ? C2 DIO 220 A 1 
HETATM 3 C C1' DIO . . . J 5 28.219 53.448 39.35 0.5 76.56 ? C1' DIO 220 A 1 
HETATM 4 C C2' DIO . . . J 5 28.994 54.062 37.239 0.5 76.12 ? C2' DIO 220 A 1 
HETATM 5 O O1 DIO . . . J 5 27.431 55.528 38.373 0.5 78.43 ? O1 DIO 220 A 1 
HETATM 6 O O1' DIO . . . J 5 29.12 53.109 38.296 0.5 75.01 ? O1' DIO 220 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           224 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#