data_5O2J # _model_server_result.job_id qh444E9HypQKPEZqpzHBCg _model_server_result.datetime_utc '2024-10-13 19:18:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5o2j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5O2J # _exptl.entry_id 5O2J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 79.98 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHONATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5O2J _cell.length_a 113.21 _cell.length_b 39.03 _cell.length_c 63.52 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O2J _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'H O3 P -2' _chem_comp.formula_weight 79.98 _chem_comp.id 2PO _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHONATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P 2PO sing 1 n n P O2P 2PO sing 2 n n P O3P 2PO doub 3 n n P HP 2PO sing 4 n n # _atom_sites.entry_id 5O2J _atom_sites.fract_transf_matrix[1][1] 0.008833 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025621 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015743 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2PO A 1 301 1 2PO PHO . C 3 EDO A 1 302 1 EDO EDO . D 4 HOH A 1 401 101 HOH HOH . D 4 HOH A 2 402 195 HOH HOH . D 4 HOH A 3 403 140 HOH HOH . D 4 HOH A 4 404 74 HOH HOH . D 4 HOH A 5 405 151 HOH HOH . D 4 HOH A 6 406 161 HOH HOH . D 4 HOH A 7 407 83 HOH HOH . D 4 HOH A 8 408 153 HOH HOH . D 4 HOH A 9 409 189 HOH HOH . D 4 HOH A 10 410 79 HOH HOH . D 4 HOH A 11 411 4 HOH HOH . D 4 HOH A 12 412 52 HOH HOH . D 4 HOH A 13 413 148 HOH HOH . D 4 HOH A 14 414 88 HOH HOH . D 4 HOH A 15 415 40 HOH HOH . D 4 HOH A 16 416 150 HOH HOH . D 4 HOH A 17 417 7 HOH HOH . D 4 HOH A 18 418 84 HOH HOH . D 4 HOH A 19 419 136 HOH HOH . D 4 HOH A 20 420 81 HOH HOH . D 4 HOH A 21 421 73 HOH HOH . D 4 HOH A 22 422 138 HOH HOH . D 4 HOH A 23 423 34 HOH HOH . D 4 HOH A 24 424 86 HOH HOH . D 4 HOH A 25 425 118 HOH HOH . D 4 HOH A 26 426 152 HOH HOH . D 4 HOH A 27 427 70 HOH HOH . D 4 HOH A 28 428 54 HOH HOH . D 4 HOH A 29 429 162 HOH HOH . D 4 HOH A 30 430 163 HOH HOH . D 4 HOH A 31 431 20 HOH HOH . D 4 HOH A 32 432 6 HOH HOH . D 4 HOH A 33 433 75 HOH HOH . D 4 HOH A 34 434 186 HOH HOH . D 4 HOH A 35 435 100 HOH HOH . D 4 HOH A 36 436 2 HOH HOH . D 4 HOH A 37 437 107 HOH HOH . D 4 HOH A 38 438 149 HOH HOH . D 4 HOH A 39 439 17 HOH HOH . D 4 HOH A 40 440 19 HOH HOH . D 4 HOH A 41 441 129 HOH HOH . D 4 HOH A 42 442 1 HOH HOH . D 4 HOH A 43 443 77 HOH HOH . D 4 HOH A 44 444 48 HOH HOH . D 4 HOH A 45 445 32 HOH HOH . D 4 HOH A 46 446 93 HOH HOH . D 4 HOH A 47 447 168 HOH HOH . D 4 HOH A 48 448 173 HOH HOH . D 4 HOH A 49 449 184 HOH HOH . D 4 HOH A 50 450 180 HOH HOH . D 4 HOH A 51 451 154 HOH HOH . D 4 HOH A 52 452 174 HOH HOH . D 4 HOH A 53 453 45 HOH HOH . D 4 HOH A 54 454 141 HOH HOH . D 4 HOH A 55 455 61 HOH HOH . D 4 HOH A 56 456 146 HOH HOH . D 4 HOH A 57 457 5 HOH HOH . D 4 HOH A 58 458 171 HOH HOH . D 4 HOH A 59 459 94 HOH HOH . D 4 HOH A 60 460 29 HOH HOH . D 4 HOH A 61 461 109 HOH HOH . D 4 HOH A 62 462 18 HOH HOH . D 4 HOH A 63 463 144 HOH HOH . D 4 HOH A 64 464 30 HOH HOH . D 4 HOH A 65 465 26 HOH HOH . D 4 HOH A 66 466 63 HOH HOH . D 4 HOH A 67 467 35 HOH HOH . D 4 HOH A 68 468 91 HOH HOH . D 4 HOH A 69 469 134 HOH HOH . D 4 HOH A 70 470 47 HOH HOH . D 4 HOH A 71 471 145 HOH HOH . D 4 HOH A 72 472 128 HOH HOH . D 4 HOH A 73 473 102 HOH HOH . D 4 HOH A 74 474 156 HOH HOH . D 4 HOH A 75 475 158 HOH HOH . D 4 HOH A 76 476 39 HOH HOH . D 4 HOH A 77 477 38 HOH HOH . D 4 HOH A 78 478 89 HOH HOH . D 4 HOH A 79 479 143 HOH HOH . D 4 HOH A 80 480 169 HOH HOH . D 4 HOH A 81 481 24 HOH HOH . D 4 HOH A 82 482 142 HOH HOH . D 4 HOH A 83 483 14 HOH HOH . D 4 HOH A 84 484 135 HOH HOH . D 4 HOH A 85 485 159 HOH HOH . D 4 HOH A 86 486 90 HOH HOH . D 4 HOH A 87 487 64 HOH HOH . D 4 HOH A 88 488 182 HOH HOH . D 4 HOH A 89 489 147 HOH HOH . D 4 HOH A 90 490 23 HOH HOH . D 4 HOH A 91 491 43 HOH HOH . D 4 HOH A 92 492 65 HOH HOH . D 4 HOH A 93 493 112 HOH HOH . D 4 HOH A 94 494 127 HOH HOH . D 4 HOH A 95 495 49 HOH HOH . D 4 HOH A 96 496 76 HOH HOH . D 4 HOH A 97 497 31 HOH HOH . D 4 HOH A 98 498 44 HOH HOH . D 4 HOH A 99 499 69 HOH HOH . D 4 HOH A 100 500 122 HOH HOH . D 4 HOH A 101 501 25 HOH HOH . D 4 HOH A 102 502 46 HOH HOH . D 4 HOH A 103 503 8 HOH HOH . D 4 HOH A 104 504 9 HOH HOH . D 4 HOH A 105 505 125 HOH HOH . D 4 HOH A 106 506 95 HOH HOH . D 4 HOH A 107 507 164 HOH HOH . D 4 HOH A 108 508 33 HOH HOH . D 4 HOH A 109 509 185 HOH HOH . D 4 HOH A 110 510 132 HOH HOH . D 4 HOH A 111 511 160 HOH HOH . D 4 HOH A 112 512 41 HOH HOH . D 4 HOH A 113 513 78 HOH HOH . D 4 HOH A 114 514 194 HOH HOH . D 4 HOH A 115 515 131 HOH HOH . D 4 HOH A 116 516 12 HOH HOH . D 4 HOH A 117 517 167 HOH HOH . D 4 HOH A 118 518 50 HOH HOH . D 4 HOH A 119 519 133 HOH HOH . D 4 HOH A 120 520 13 HOH HOH . D 4 HOH A 121 521 11 HOH HOH . D 4 HOH A 122 522 130 HOH HOH . D 4 HOH A 123 523 10 HOH HOH . D 4 HOH A 124 524 58 HOH HOH . D 4 HOH A 125 525 16 HOH HOH . D 4 HOH A 126 526 37 HOH HOH . D 4 HOH A 127 527 137 HOH HOH . D 4 HOH A 128 528 28 HOH HOH . D 4 HOH A 129 529 36 HOH HOH . D 4 HOH A 130 530 15 HOH HOH . D 4 HOH A 131 531 42 HOH HOH . D 4 HOH A 132 532 106 HOH HOH . D 4 HOH A 133 533 68 HOH HOH . D 4 HOH A 134 534 72 HOH HOH . D 4 HOH A 135 535 124 HOH HOH . D 4 HOH A 136 536 57 HOH HOH . D 4 HOH A 137 537 179 HOH HOH . D 4 HOH A 138 538 53 HOH HOH . D 4 HOH A 139 539 22 HOH HOH . D 4 HOH A 140 540 105 HOH HOH . D 4 HOH A 141 541 196 HOH HOH . D 4 HOH A 142 542 60 HOH HOH . D 4 HOH A 143 543 172 HOH HOH . D 4 HOH A 144 544 96 HOH HOH . D 4 HOH A 145 545 59 HOH HOH . D 4 HOH A 146 546 193 HOH HOH . D 4 HOH A 147 547 55 HOH HOH . D 4 HOH A 148 548 155 HOH HOH . D 4 HOH A 149 549 71 HOH HOH . D 4 HOH A 150 550 80 HOH HOH . D 4 HOH A 151 551 165 HOH HOH . D 4 HOH A 152 552 126 HOH HOH . D 4 HOH A 153 553 21 HOH HOH . D 4 HOH A 154 554 120 HOH HOH . D 4 HOH A 155 555 92 HOH HOH . D 4 HOH A 156 556 27 HOH HOH . D 4 HOH A 157 557 82 HOH HOH . D 4 HOH A 158 558 187 HOH HOH . D 4 HOH A 159 559 110 HOH HOH . D 4 HOH A 160 560 62 HOH HOH . D 4 HOH A 161 561 181 HOH HOH . D 4 HOH A 162 562 51 HOH HOH . D 4 HOH A 163 563 166 HOH HOH . D 4 HOH A 164 564 175 HOH HOH . D 4 HOH A 165 565 99 HOH HOH . D 4 HOH A 166 566 108 HOH HOH . D 4 HOH A 167 567 104 HOH HOH . D 4 HOH A 168 568 123 HOH HOH . D 4 HOH A 169 569 183 HOH HOH . D 4 HOH A 170 570 192 HOH HOH . D 4 HOH A 171 571 170 HOH HOH . D 4 HOH A 172 572 176 HOH HOH . D 4 HOH A 173 573 117 HOH HOH . D 4 HOH A 174 574 116 HOH HOH . D 4 HOH A 175 575 188 HOH HOH . D 4 HOH A 176 576 66 HOH HOH . D 4 HOH A 177 577 113 HOH HOH . D 4 HOH A 178 578 98 HOH HOH . D 4 HOH A 179 579 56 HOH HOH . D 4 HOH A 180 580 67 HOH HOH . D 4 HOH A 181 581 177 HOH HOH . D 4 HOH A 182 582 119 HOH HOH . D 4 HOH A 183 583 178 HOH HOH . D 4 HOH A 184 584 85 HOH HOH . D 4 HOH A 185 585 103 HOH HOH . D 4 HOH A 186 586 139 HOH HOH . D 4 HOH A 187 587 157 HOH HOH . D 4 HOH A 188 588 191 HOH HOH . D 4 HOH A 189 589 190 HOH HOH . D 4 HOH A 190 590 87 HOH HOH . D 4 HOH A 191 591 115 HOH HOH . D 4 HOH A 192 592 114 HOH HOH . D 4 HOH A 193 593 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 2PO . . . B 2 -19.058 17.064 -11.107 1 11.37 ? P 2PO 301 A 1 HETATM 2 O O1P 2PO . . . B 2 -19.316 18.515 -11.459 1 12.75 ? O1P 2PO 301 A 1 HETATM 3 O O2P 2PO . . . B 2 -17.52 16.81 -10.834 1 11.79 ? O2P 2PO 301 A 1 HETATM 4 O O3P 2PO . . . B 2 -19.924 16.609 -9.874 1 12.38 ? O3P 2PO 301 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #