data_5O38
#
_model_server_result.job_id            noRB7pWlTSDqLso4N3KwgQ 
_model_server_result.datetime_utc      '2024-11-24 19:15:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5o38 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    5O38 
#
_exptl.entry_id    5O38 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              134.174 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2~{S})-1-[(2~{S})-2-oxidanylpropoxy]propan-2-ol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5O38 
_cell.length_a            52.42 
_cell.length_b            71.409 
_cell.length_c            31.969 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5O38 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H14 O3' 
_chem_comp.formula_weight    134.174 
_chem_comp.id                DQW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2~{S})-1-[(2~{S})-2-oxidanylpropoxy]propan-2-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAI CAG DQW sing 133 n n 
OAA CAB DQW sing 134 n n 
CAB CAD DQW sing 135 n n 
CAB CAC DQW sing 136 n n 
CAG OAH DQW sing 137 n n 
CAG CAF DQW sing 138 n n 
OAE CAC DQW sing 139 n n 
OAE CAF DQW sing 140 n n 
CAD HAG DQW sing 141 n n 
CAD HAE DQW sing 142 n n 
CAD HAF DQW sing 143 n n 
CAB HAB DQW sing 144 n n 
OAA HAA DQW sing 145 n n 
CAC HAC DQW sing 146 n n 
CAC HAD DQW sing 147 n n 
CAF HAI DQW sing 148 n n 
CAF HAH DQW sing 149 n n 
CAG HAJ DQW sing 150 n n 
CAI HAL DQW sing 151 n n 
CAI HAM DQW sing 152 n n 
CAI HAK DQW sing 153 n n 
OAH HAN DQW sing 154 n n 
#
_atom_sites.entry_id                     5O38 
_atom_sites.fract_transf_matrix[1][1]    0.019077 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014004 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.03128 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 9JB A 1 501 1 9JB PEP . 
C 3 CL A 1 502 1 CL CL . 
D 4 DQW A 1 503 1 DQW DPG . 
E 5 HOH A 1 601 233 HOH HOH . 
E 5 HOH A 2 602 234 HOH HOH . 
E 5 HOH A 3 603 229 HOH HOH . 
E 5 HOH A 4 604 154 HOH HOH . 
E 5 HOH A 5 605 131 HOH HOH . 
E 5 HOH A 6 606 239 HOH HOH . 
E 5 HOH A 7 607 199 HOH HOH . 
E 5 HOH A 8 608 107 HOH HOH . 
E 5 HOH A 9 609 108 HOH HOH . 
E 5 HOH A 10 610 103 HOH HOH . 
E 5 HOH A 11 611 44 HOH HOH . 
E 5 HOH A 12 612 54 HOH HOH . 
E 5 HOH A 13 613 173 HOH HOH . 
E 5 HOH A 14 614 2 HOH HOH . 
E 5 HOH A 15 615 182 HOH HOH . 
E 5 HOH A 16 616 4 HOH HOH . 
E 5 HOH A 17 617 189 HOH HOH . 
E 5 HOH A 18 618 192 HOH HOH . 
E 5 HOH A 19 619 143 HOH HOH . 
E 5 HOH A 20 620 208 HOH HOH . 
E 5 HOH A 21 621 37 HOH HOH . 
E 5 HOH A 22 622 30 HOH HOH . 
E 5 HOH A 23 623 116 HOH HOH . 
E 5 HOH A 24 624 31 HOH HOH . 
E 5 HOH A 25 625 146 HOH HOH . 
E 5 HOH A 26 626 113 HOH HOH . 
E 5 HOH A 27 627 138 HOH HOH . 
E 5 HOH A 28 628 77 HOH HOH . 
E 5 HOH A 29 629 87 HOH HOH . 
E 5 HOH A 30 630 8 HOH HOH . 
E 5 HOH A 31 631 21 HOH HOH . 
E 5 HOH A 32 632 130 HOH HOH . 
E 5 HOH A 33 633 119 HOH HOH . 
E 5 HOH A 34 634 1 HOH HOH . 
E 5 HOH A 35 635 153 HOH HOH . 
E 5 HOH A 36 636 129 HOH HOH . 
E 5 HOH A 37 637 90 HOH HOH . 
E 5 HOH A 38 638 47 HOH HOH . 
E 5 HOH A 39 639 65 HOH HOH . 
E 5 HOH A 40 640 41 HOH HOH . 
E 5 HOH A 41 641 125 HOH HOH . 
E 5 HOH A 42 642 91 HOH HOH . 
E 5 HOH A 43 643 193 HOH HOH . 
E 5 HOH A 44 644 225 HOH HOH . 
E 5 HOH A 45 645 162 HOH HOH . 
E 5 HOH A 46 646 28 HOH HOH . 
E 5 HOH A 47 647 15 HOH HOH . 
E 5 HOH A 48 648 96 HOH HOH . 
E 5 HOH A 49 649 24 HOH HOH . 
E 5 HOH A 50 650 68 HOH HOH . 
E 5 HOH A 51 651 9 HOH HOH . 
E 5 HOH A 52 652 39 HOH HOH . 
E 5 HOH A 53 653 32 HOH HOH . 
E 5 HOH A 54 654 64 HOH HOH . 
E 5 HOH A 55 655 104 HOH HOH . 
E 5 HOH A 56 656 114 HOH HOH . 
E 5 HOH A 57 657 13 HOH HOH . 
E 5 HOH A 58 658 48 HOH HOH . 
E 5 HOH A 59 659 183 HOH HOH . 
E 5 HOH A 60 660 102 HOH HOH . 
E 5 HOH A 61 661 6 HOH HOH . 
E 5 HOH A 62 662 3 HOH HOH . 
E 5 HOH A 63 663 14 HOH HOH . 
E 5 HOH A 64 664 109 HOH HOH . 
E 5 HOH A 65 665 118 HOH HOH . 
E 5 HOH A 66 666 20 HOH HOH . 
E 5 HOH A 67 667 69 HOH HOH . 
E 5 HOH A 68 668 38 HOH HOH . 
E 5 HOH A 69 669 60 HOH HOH . 
E 5 HOH A 70 670 56 HOH HOH . 
E 5 HOH A 71 671 26 HOH HOH . 
E 5 HOH A 72 672 85 HOH HOH . 
E 5 HOH A 73 673 157 HOH HOH . 
E 5 HOH A 74 674 49 HOH HOH . 
E 5 HOH A 75 675 52 HOH HOH . 
E 5 HOH A 76 676 212 HOH HOH . 
E 5 HOH A 77 677 163 HOH HOH . 
E 5 HOH A 78 678 124 HOH HOH . 
E 5 HOH A 79 679 100 HOH HOH . 
E 5 HOH A 80 680 195 HOH HOH . 
E 5 HOH A 81 681 16 HOH HOH . 
E 5 HOH A 82 682 106 HOH HOH . 
E 5 HOH A 83 683 99 HOH HOH . 
E 5 HOH A 84 684 29 HOH HOH . 
E 5 HOH A 85 685 50 HOH HOH . 
E 5 HOH A 86 686 76 HOH HOH . 
E 5 HOH A 87 687 175 HOH HOH . 
E 5 HOH A 88 688 88 HOH HOH . 
E 5 HOH A 89 689 10 HOH HOH . 
E 5 HOH A 90 690 145 HOH HOH . 
E 5 HOH A 91 691 128 HOH HOH . 
E 5 HOH A 92 692 19 HOH HOH . 
E 5 HOH A 93 693 110 HOH HOH . 
E 5 HOH A 94 694 105 HOH HOH . 
E 5 HOH A 95 695 149 HOH HOH . 
E 5 HOH A 96 696 36 HOH HOH . 
E 5 HOH A 97 697 159 HOH HOH . 
E 5 HOH A 98 698 95 HOH HOH . 
E 5 HOH A 99 699 63 HOH HOH . 
E 5 HOH A 100 700 23 HOH HOH . 
E 5 HOH A 101 701 22 HOH HOH . 
E 5 HOH A 102 702 200 HOH HOH . 
E 5 HOH A 103 703 89 HOH HOH . 
E 5 HOH A 104 704 33 HOH HOH . 
E 5 HOH A 105 705 18 HOH HOH . 
E 5 HOH A 106 706 62 HOH HOH . 
E 5 HOH A 107 707 5 HOH HOH . 
E 5 HOH A 108 708 81 HOH HOH . 
E 5 HOH A 109 709 111 HOH HOH . 
E 5 HOH A 110 710 51 HOH HOH . 
E 5 HOH A 111 711 238 HOH HOH . 
E 5 HOH A 112 712 67 HOH HOH . 
E 5 HOH A 113 713 115 HOH HOH . 
E 5 HOH A 114 714 169 HOH HOH . 
E 5 HOH A 115 715 27 HOH HOH . 
E 5 HOH A 116 716 228 HOH HOH . 
E 5 HOH A 117 717 194 HOH HOH . 
E 5 HOH A 118 718 7 HOH HOH . 
E 5 HOH A 119 719 97 HOH HOH . 
E 5 HOH A 120 720 46 HOH HOH . 
E 5 HOH A 121 721 83 HOH HOH . 
E 5 HOH A 122 722 185 HOH HOH . 
E 5 HOH A 123 723 75 HOH HOH . 
E 5 HOH A 124 724 178 HOH HOH . 
E 5 HOH A 125 725 45 HOH HOH . 
E 5 HOH A 126 726 58 HOH HOH . 
E 5 HOH A 127 727 179 HOH HOH . 
E 5 HOH A 128 728 211 HOH HOH . 
E 5 HOH A 129 729 166 HOH HOH . 
E 5 HOH A 130 730 121 HOH HOH . 
E 5 HOH A 131 731 170 HOH HOH . 
E 5 HOH A 132 732 184 HOH HOH . 
E 5 HOH A 133 733 70 HOH HOH . 
E 5 HOH A 134 734 40 HOH HOH . 
E 5 HOH A 135 735 93 HOH HOH . 
E 5 HOH A 136 736 78 HOH HOH . 
E 5 HOH A 137 737 53 HOH HOH . 
E 5 HOH A 138 738 86 HOH HOH . 
E 5 HOH A 139 739 11 HOH HOH . 
E 5 HOH A 140 740 237 HOH HOH . 
E 5 HOH A 141 741 59 HOH HOH . 
E 5 HOH A 142 742 165 HOH HOH . 
E 5 HOH A 143 743 35 HOH HOH . 
E 5 HOH A 144 744 197 HOH HOH . 
E 5 HOH A 145 745 126 HOH HOH . 
E 5 HOH A 146 746 155 HOH HOH . 
E 5 HOH A 147 747 220 HOH HOH . 
E 5 HOH A 148 748 17 HOH HOH . 
E 5 HOH A 149 749 191 HOH HOH . 
E 5 HOH A 150 750 236 HOH HOH . 
E 5 HOH A 151 751 139 HOH HOH . 
E 5 HOH A 152 752 231 HOH HOH . 
E 5 HOH A 153 753 55 HOH HOH . 
E 5 HOH A 154 754 210 HOH HOH . 
E 5 HOH A 155 755 92 HOH HOH . 
E 5 HOH A 156 756 230 HOH HOH . 
E 5 HOH A 157 757 171 HOH HOH . 
E 5 HOH A 158 758 226 HOH HOH . 
E 5 HOH A 159 759 120 HOH HOH . 
E 5 HOH A 160 760 206 HOH HOH . 
E 5 HOH A 161 761 151 HOH HOH . 
E 5 HOH A 162 762 135 HOH HOH . 
E 5 HOH A 163 763 164 HOH HOH . 
E 5 HOH A 164 764 117 HOH HOH . 
E 5 HOH A 165 765 140 HOH HOH . 
E 5 HOH A 166 766 201 HOH HOH . 
E 5 HOH A 167 767 57 HOH HOH . 
E 5 HOH A 168 768 241 HOH HOH . 
E 5 HOH A 169 769 122 HOH HOH . 
E 5 HOH A 170 770 152 HOH HOH . 
E 5 HOH A 171 771 207 HOH HOH . 
E 5 HOH A 172 772 176 HOH HOH . 
E 5 HOH A 173 773 217 HOH HOH . 
E 5 HOH A 174 774 61 HOH HOH . 
E 5 HOH A 175 775 12 HOH HOH . 
E 5 HOH A 176 776 147 HOH HOH . 
E 5 HOH A 177 777 112 HOH HOH . 
E 5 HOH A 178 778 218 HOH HOH . 
E 5 HOH A 179 779 80 HOH HOH . 
E 5 HOH A 180 780 172 HOH HOH . 
E 5 HOH A 181 781 82 HOH HOH . 
E 5 HOH A 182 782 84 HOH HOH . 
E 5 HOH A 183 783 43 HOH HOH . 
E 5 HOH A 184 784 168 HOH HOH . 
E 5 HOH A 185 785 227 HOH HOH . 
E 5 HOH A 186 786 223 HOH HOH . 
E 5 HOH A 187 787 72 HOH HOH . 
E 5 HOH A 188 788 142 HOH HOH . 
E 5 HOH A 189 789 34 HOH HOH . 
E 5 HOH A 190 790 134 HOH HOH . 
E 5 HOH A 191 791 25 HOH HOH . 
E 5 HOH A 192 792 222 HOH HOH . 
E 5 HOH A 193 793 202 HOH HOH . 
E 5 HOH A 194 794 123 HOH HOH . 
E 5 HOH A 195 795 214 HOH HOH . 
E 5 HOH A 196 796 190 HOH HOH . 
E 5 HOH A 197 797 221 HOH HOH . 
E 5 HOH A 198 798 160 HOH HOH . 
E 5 HOH A 199 799 71 HOH HOH . 
E 5 HOH A 200 800 127 HOH HOH . 
E 5 HOH A 201 801 187 HOH HOH . 
E 5 HOH A 202 802 79 HOH HOH . 
E 5 HOH A 203 803 141 HOH HOH . 
E 5 HOH A 204 804 198 HOH HOH . 
E 5 HOH A 205 805 156 HOH HOH . 
E 5 HOH A 206 806 150 HOH HOH . 
E 5 HOH A 207 807 215 HOH HOH . 
E 5 HOH A 208 808 203 HOH HOH . 
E 5 HOH A 209 809 219 HOH HOH . 
E 5 HOH A 210 810 204 HOH HOH . 
E 5 HOH A 211 811 186 HOH HOH . 
E 5 HOH A 212 812 136 HOH HOH . 
E 5 HOH A 213 813 148 HOH HOH . 
E 5 HOH A 214 814 133 HOH HOH . 
E 5 HOH A 215 815 216 HOH HOH . 
E 5 HOH A 216 816 98 HOH HOH . 
E 5 HOH A 217 817 42 HOH HOH . 
E 5 HOH A 218 818 144 HOH HOH . 
E 5 HOH A 219 819 213 HOH HOH . 
E 5 HOH A 220 820 161 HOH HOH . 
E 5 HOH A 221 821 94 HOH HOH . 
E 5 HOH A 222 822 167 HOH HOH . 
E 5 HOH A 223 823 74 HOH HOH . 
E 5 HOH A 224 824 181 HOH HOH . 
E 5 HOH A 225 825 73 HOH HOH . 
E 5 HOH A 226 826 235 HOH HOH . 
E 5 HOH A 227 827 101 HOH HOH . 
E 5 HOH A 228 828 240 HOH HOH . 
E 5 HOH A 229 829 158 HOH HOH . 
E 5 HOH A 230 830 209 HOH HOH . 
E 5 HOH A 231 831 180 HOH HOH . 
E 5 HOH A 232 832 224 HOH HOH . 
E 5 HOH A 233 833 66 HOH HOH . 
E 5 HOH A 234 834 132 HOH HOH . 
E 5 HOH A 235 835 205 HOH HOH . 
E 5 HOH A 236 836 137 HOH HOH . 
E 5 HOH A 237 837 177 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAD DQW . . . D 4 1.471 3.162 -7.786 0.5 19.81 ? CAD DQW 503 A 1 
HETATM 2 C CAB DQW . . . D 4 1.253 1.802 -8.402 0.5 20.07 ? CAB DQW 503 A 1 
HETATM 3 O OAA DQW . . . D 4 0.788 1.977 -9.718 0.5 18.87 ? OAA DQW 503 A 1 
HETATM 4 C CAC DQW . . . D 4 0.221 1.038 -7.605 0.5 20.32 ? CAC DQW 503 A 1 
HETATM 5 O OAE DQW . . . D 4 0.134 -0.283 -8.083 0.5 20.82 ? OAE DQW 503 A 1 
HETATM 6 C CAF DQW . . . D 4 -0.868 -1.052 -7.46 0.5 21.92 ? CAF DQW 503 A 1 
HETATM 7 C CAG DQW . . . D 4 -1.03 -2.349 -8.216 0.5 23.79 ? CAG DQW 503 A 1 
HETATM 8 C CAI DQW . . . D 4 -1.634 -2.045 -9.565 0.5 24.12 ? CAI DQW 503 A 1 
HETATM 9 O OAH DQW . . . D 4 -1.883 -3.216 -7.51 0.5 26.15 ? OAH DQW 503 A 1 
HETATM 10 H HAG DQW . . . D 4 2.043 3.696 -8.369 0.5 23.77 ? HAG DQW 503 A 1 
HETATM 11 H HAE DQW . . . D 4 1.9 3.06 -6.915 0.5 23.77 ? HAE DQW 503 A 1 
HETATM 12 H HAF DQW . . . D 4 0.611 3.61 -7.674 0.5 23.77 ? HAF DQW 503 A 1 
HETATM 13 H HAB DQW . . . D 4 2.094 1.306 -8.413 0.5 24.09 ? HAB DQW 503 A 1 
HETATM 14 H HAA DQW . . . D 4 1.241 1.445 -10.265 0.5 22.64 ? HAA DQW 503 A 1 
HETATM 15 H HAC DQW . . . D 4 -0.647 1.474 -7.696 0.5 24.39 ? HAC DQW 503 A 1 
HETATM 16 H HAD DQW . . . D 4 0.481 1.026 -6.664 0.5 24.39 ? HAD DQW 503 A 1 
HETATM 17 H HAI DQW . . . D 4 -0.61 -1.241 -6.538 0.5 26.3 ? HAI DQW 503 A 1 
HETATM 18 H HAH DQW . . . D 4 -1.711 -0.56 -7.47 0.5 26.3 ? HAH DQW 503 A 1 
HETATM 19 H HAJ DQW . . . D 4 -0.158 -2.771 -8.334 0.5 28.55 ? HAJ DQW 503 A 1 
HETATM 20 H HAL DQW . . . D 4 -2.416 -1.472 -9.449 0.5 28.95 ? HAL DQW 503 A 1 
HETATM 21 H HAM DQW . . . D 4 -1.902 -2.878 -9.997 0.5 28.95 ? HAM DQW 503 A 1 
HETATM 22 H HAK DQW . . . D 4 -0.975 -1.588 -10.121 0.5 28.95 ? HAK DQW 503 A 1 
HETATM 23 H HAN DQW . . . D 4 -1.804 -3.065 -6.639 0.5 31.38 ? HAN DQW 503 A 1 
#
_model_server_stats.io_time_ms              72 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           361 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           23 
#