data_5O3A # _model_server_result.job_id 5mpMF4IY3sAnyCcCXAnmaw _model_server_result.datetime_utc '2024-11-28 18:28:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5o3a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 5O3A # _exptl.entry_id 5O3A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 438.907 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl (2R)-2-[(4S)-6-(4-chlorophenyl)-8-methoxy-1-methyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]butanoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5O3A _cell.length_a 126.799 _cell.length_b 126.799 _cell.length_c 43.194 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O3A _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H23 Cl N4 O3' _chem_comp.formula_weight 438.907 _chem_comp.id 31P _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl (2R)-2-[(4S)-6-(4-chlorophenyl)-8-methoxy-1-methyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]butanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBE CBD 31P sing 1 n n CAR CAP 31P sing 2 n n NAO CAP 31P doub 3 n y NAO NAN 31P sing 4 n y CAP NAK 31P sing 5 n y CAF CAA 31P doub 6 n y CAF CAE 31P sing 7 n y CBD CAS 31P sing 8 n n NAN CAJ 31P doub 9 n y CAA CAB 31P sing 10 n y NAK CAJ 31P sing 11 n y NAK CAE 31P sing 12 n n CAJ CAI 31P sing 13 n n CAE CAD 31P doub 14 n y CAM OAL 31P sing 15 n n CAS CAI 31P sing 16 n n CAS CAT 31P sing 17 n n CAI NAH 31P sing 18 n n CAB OAL 31P sing 19 n n CAB CAC 31P doub 20 n y CAD CAC 31P sing 21 n y CAD CAG 31P sing 22 n n CAT OAU 31P sing 23 n n CAT OAV 31P doub 24 n n OAU CAW 31P sing 25 n n NAH CAG 31P doub 26 n n CAG CAQ 31P sing 27 n n CAQ CAX 31P doub 28 n y CAQ CBB 31P sing 29 n y CAX CAY 31P sing 30 n y CBB CBA 31P doub 31 n y CAY CAZ 31P doub 32 n y CBA CAZ 31P sing 33 n y CAZ CL1 31P sing 34 n n CAW H1 31P sing 35 n n CAW H2 31P sing 36 n n CAW H3 31P sing 37 n n CAS H4 31P sing 38 n n CBD H5 31P sing 39 n n CBD H6 31P sing 40 n n CBE H7 31P sing 41 n n CBE H8 31P sing 42 n n CBE H9 31P sing 43 n n CAI H10 31P sing 44 n n CAR H11 31P sing 45 n n CAR H12 31P sing 46 n n CAR H13 31P sing 47 n n CAF H14 31P sing 48 n n CAA H15 31P sing 49 n n CAM H16 31P sing 50 n n CAM H17 31P sing 51 n n CAM H18 31P sing 52 n n CAC H19 31P sing 53 n n CAX H20 31P sing 54 n n CAY H21 31P sing 55 n n CBA H22 31P sing 56 n n CBB H23 31P sing 57 n n # _atom_sites.entry_id 5O3A _atom_sites.fract_transf_matrix[1][1] 0.007886 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007886 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023151 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 31P A 1 501 1 31P ETH . C 3 HOH A 1 601 59 HOH HOH . C 3 HOH A 2 602 55 HOH HOH . C 3 HOH A 3 603 20 HOH HOH . C 3 HOH A 4 604 46 HOH HOH . C 3 HOH A 5 605 56 HOH HOH . C 3 HOH A 6 606 58 HOH HOH . C 3 HOH A 7 607 51 HOH HOH . C 3 HOH A 8 608 26 HOH HOH . C 3 HOH A 9 609 28 HOH HOH . C 3 HOH A 10 610 14 HOH HOH . C 3 HOH A 11 611 21 HOH HOH . C 3 HOH A 12 612 34 HOH HOH . C 3 HOH A 13 613 52 HOH HOH . C 3 HOH A 14 614 19 HOH HOH . C 3 HOH A 15 615 22 HOH HOH . C 3 HOH A 16 616 25 HOH HOH . C 3 HOH A 17 617 60 HOH HOH . C 3 HOH A 18 618 4 HOH HOH . C 3 HOH A 19 619 7 HOH HOH . C 3 HOH A 20 620 16 HOH HOH . C 3 HOH A 21 621 8 HOH HOH . C 3 HOH A 22 622 1 HOH HOH . C 3 HOH A 23 623 32 HOH HOH . C 3 HOH A 24 624 23 HOH HOH . C 3 HOH A 25 625 2 HOH HOH . C 3 HOH A 26 626 50 HOH HOH . C 3 HOH A 27 627 30 HOH HOH . C 3 HOH A 28 628 6 HOH HOH . C 3 HOH A 29 629 12 HOH HOH . C 3 HOH A 30 630 13 HOH HOH . C 3 HOH A 31 631 3 HOH HOH . C 3 HOH A 32 632 40 HOH HOH . C 3 HOH A 33 633 53 HOH HOH . C 3 HOH A 34 634 49 HOH HOH . C 3 HOH A 35 635 11 HOH HOH . C 3 HOH A 36 636 36 HOH HOH . C 3 HOH A 37 637 9 HOH HOH . C 3 HOH A 38 638 44 HOH HOH . C 3 HOH A 39 639 54 HOH HOH . C 3 HOH A 40 640 5 HOH HOH . C 3 HOH A 41 641 17 HOH HOH . C 3 HOH A 42 642 33 HOH HOH . C 3 HOH A 43 643 47 HOH HOH . C 3 HOH A 44 644 42 HOH HOH . C 3 HOH A 45 645 10 HOH HOH . C 3 HOH A 46 646 24 HOH HOH . C 3 HOH A 47 647 57 HOH HOH . C 3 HOH A 48 648 18 HOH HOH . C 3 HOH A 49 649 29 HOH HOH . C 3 HOH A 50 650 15 HOH HOH . C 3 HOH A 51 651 43 HOH HOH . C 3 HOH A 52 652 48 HOH HOH . C 3 HOH A 53 653 27 HOH HOH . C 3 HOH A 54 654 39 HOH HOH . C 3 HOH A 55 655 37 HOH HOH . C 3 HOH A 56 656 38 HOH HOH . C 3 HOH A 57 657 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAW 31P . . . B 2 29.343 -4.563 -33.978 1 43.11 ? CAW 31P 501 A 1 HETATM 2 O OAU 31P . . . B 2 28.079 -4.44 -33.265 1 44.93 ? OAU 31P 501 A 1 HETATM 3 C CAT 31P . . . B 2 26.956 -5.044 -33.878 1 45.83 ? CAT 31P 501 A 1 HETATM 4 O OAV 31P . . . B 2 27.089 -5.603 -34.938 1 48.89 ? OAV 31P 501 A 1 HETATM 5 C CAS 31P . . . B 2 25.641 -4.907 -33.103 1 41.87 ? CAS 31P 501 A 1 HETATM 6 C CBD 31P . . . B 2 24.863 -3.663 -33.709 1 39.85 ? CBD 31P 501 A 1 HETATM 7 C CBE 31P . . . B 2 25.481 -2.275 -33.342 1 32.67 ? CBE 31P 501 A 1 HETATM 8 C CAI 31P . . . B 2 25.988 -4.73 -31.549 1 39.85 ? CAI 31P 501 A 1 HETATM 9 N NAH 31P . . . B 2 27.015 -5.61 -31.008 1 39.6 ? NAH 31P 501 A 1 HETATM 10 C CAJ 31P . . . B 2 24.841 -4.54 -30.629 1 40.44 ? CAJ 31P 501 A 1 HETATM 11 N NAN 31P . . . B 2 23.459 -4.819 -30.741 1 37.16 ? NAN 31P 501 A 1 HETATM 12 N NAO 31P . . . B 2 22.856 -4.488 -29.541 1 36.25 ? NAO 31P 501 A 1 HETATM 13 C CAP 31P . . . B 2 23.81 -4.03 -28.67 1 31.43 ? CAP 31P 501 A 1 HETATM 14 C CAR 31P . . . B 2 23.503 -3.602 -27.256 1 31.5 ? CAR 31P 501 A 1 HETATM 15 N NAK 31P . . . B 2 25.088 -4.037 -29.303 1 34.74 ? NAK 31P 501 A 1 HETATM 16 C CAE 31P . . . B 2 26.344 -3.656 -28.731 1 34.45 ? CAE 31P 501 A 1 HETATM 17 C CAF 31P . . . B 2 26.354 -2.509 -27.879 1 35.05 ? CAF 31P 501 A 1 HETATM 18 C CAA 31P . . . B 2 27.509 -2.014 -27.24 1 36.6 ? CAA 31P 501 A 1 HETATM 19 C CAB 31P . . . B 2 28.746 -2.69 -27.452 1 39.32 ? CAB 31P 501 A 1 HETATM 20 O OAL 31P . . . B 2 29.945 -2.287 -26.848 1 38.73 ? OAL 31P 501 A 1 HETATM 21 C CAM 31P . . . B 2 29.934 -1.125 -25.976 1 38.52 ? CAM 31P 501 A 1 HETATM 22 C CAC 31P . . . B 2 28.716 -3.845 -28.311 1 42.05 ? CAC 31P 501 A 1 HETATM 23 C CAD 31P . . . B 2 27.558 -4.354 -28.97 1 34.79 ? CAD 31P 501 A 1 HETATM 24 C CAG 31P . . . B 2 27.662 -5.519 -29.846 1 35.26 ? CAG 31P 501 A 1 HETATM 25 C CAQ 31P . . . B 2 28.302 -6.76 -29.361 1 37.3 ? CAQ 31P 501 A 1 HETATM 26 C CAX 31P . . . B 2 28.469 -7.06 -27.994 1 33.45 ? CAX 31P 501 A 1 HETATM 27 C CAY 31P . . . B 2 29.074 -8.204 -27.518 1 35.05 ? CAY 31P 501 A 1 HETATM 28 C CAZ 31P . . . B 2 29.579 -9.114 -28.453 1 37.35 ? CAZ 31P 501 A 1 HETATM 29 CL CL1 31P . . . B 2 30.321 -10.528 -27.936 1 39.45 ? CL1 31P 501 A 1 HETATM 30 C CBA 31P . . . B 2 29.466 -8.874 -29.839 1 36.51 ? CBA 31P 501 A 1 HETATM 31 C CBB 31P . . . B 2 28.837 -7.711 -30.282 1 34.42 ? CBB 31P 501 A 1 HETATM 32 H H1 31P . . . B 2 29.221 -4.151 -34.992 1 51.73 ? H1 31P 501 A 1 HETATM 33 H H2 31P . . . B 2 29.641 -5.599 -34.108 1 51.73 ? H2 31P 501 A 1 HETATM 34 H H3 31P . . . B 2 30.158 -3.998 -33.528 1 51.73 ? H3 31P 501 A 1 HETATM 35 H H4 31P . . . B 2 24.938 -5.746 -33.221 1 50.24 ? H4 31P 501 A 1 HETATM 36 H H5 31P . . . B 2 24.819 -3.682 -34.809 1 47.82 ? H5 31P 501 A 1 HETATM 37 H H6 31P . . . B 2 23.817 -3.645 -33.398 1 47.82 ? H6 31P 501 A 1 HETATM 38 H H7 31P . . . B 2 25.112 -1.889 -32.395 1 39.21 ? H7 31P 501 A 1 HETATM 39 H H8 31P . . . B 2 26.574 -2.306 -33.249 1 39.21 ? H8 31P 501 A 1 HETATM 40 H H9 31P . . . B 2 25.282 -1.53 -34.109 1 39.21 ? H9 31P 501 A 1 HETATM 41 H H10 31P . . . B 2 26.506 -3.743 -31.517 1 47.83 ? H10 31P 501 A 1 HETATM 42 H H11 31P . . . B 2 23.398 -2.524 -27.216 1 37.8 ? H11 31P 501 A 1 HETATM 43 H H12 31P . . . B 2 24.372 -3.837 -26.63 1 37.8 ? H12 31P 501 A 1 HETATM 44 H H13 31P . . . B 2 22.651 -4.059 -26.761 1 37.8 ? H13 31P 501 A 1 HETATM 45 H H14 31P . . . B 2 25.409 -1.973 -27.688 1 42.06 ? H14 31P 501 A 1 HETATM 46 H H15 31P . . . B 2 27.459 -1.15 -26.585 1 43.92 ? H15 31P 501 A 1 HETATM 47 H H16 31P . . . B 2 30.697 -1.185 -25.206 1 46.22 ? H16 31P 501 A 1 HETATM 48 H H17 31P . . . B 2 28.976 -1.013 -25.432 1 46.22 ? H17 31P 501 A 1 HETATM 49 H H18 31P . . . B 2 30.039 -0.168 -26.503 1 46.22 ? H18 31P 501 A 1 HETATM 50 H H19 31P . . . B 2 29.646 -4.365 -28.494 1 50.46 ? H19 31P 501 A 1 HETATM 51 H H20 31P . . . B 2 28.103 -6.404 -27.233 1 40.13 ? H20 31P 501 A 1 HETATM 52 H H21 31P . . . B 2 29.15 -8.369 -26.459 1 42.07 ? H21 31P 501 A 1 HETATM 53 H H22 31P . . . B 2 29.879 -9.643 -30.487 1 43.81 ? H22 31P 501 A 1 HETATM 54 H H23 31P . . . B 2 28.739 -7.503 -31.323 1 41.31 ? H23 31P 501 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 54 #