data_5O4T # _model_server_result.job_id fUCnP1Tf6i5xgPmUlSXFCg _model_server_result.datetime_utc '2024-11-22 16:20:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5o4t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 5O4T # _exptl.entry_id 5O4T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 190.199 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,4-dimethylquinoxaline-2,3-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5O4T _cell.length_a 60.639 _cell.length_b 60.639 _cell.length_c 63.465 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O4T _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H10 N2 O2' _chem_comp.formula_weight 190.199 _chem_comp.id 9KT _chem_comp.mon_nstd_flag . _chem_comp.name 1,4-dimethylquinoxaline-2,3-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C9 9KT doub 1 n n O1 C8 9KT doub 2 n n C9 C8 9KT sing 3 n n C9 N1 9KT sing 4 n n C8 N2 9KT sing 5 n n C1 N1 9KT sing 6 n n N1 C2 9KT sing 7 n n N2 C10 9KT sing 8 n n N2 C7 9KT sing 9 n n C2 C7 9KT doub 10 n y C2 C3 9KT sing 11 n y C7 C6 9KT sing 12 n y C3 C4 9KT doub 13 n y C6 C5 9KT doub 14 n y C4 C5 9KT sing 15 n y C3 H1 9KT sing 16 n n C4 H2 9KT sing 17 n n C5 H3 9KT sing 18 n n C6 H4 9KT sing 19 n n C10 H5 9KT sing 20 n n C10 H6 9KT sing 21 n n C10 H7 9KT sing 22 n n C1 H8 9KT sing 23 n n C1 H9 9KT sing 24 n n C1 H10 9KT sing 25 n n # _atom_sites.entry_id 5O4T _atom_sites.fract_transf_matrix[1][1] 0.016491 _atom_sites.fract_transf_matrix[1][2] 0.009521 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019042 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015757 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9KT A 1 801 1 9KT PDB . C 3 HOH A 1 901 56 HOH HOH . C 3 HOH A 2 902 91 HOH HOH . C 3 HOH A 3 903 11 HOH HOH . C 3 HOH A 4 904 133 HOH HOH . C 3 HOH A 5 905 137 HOH HOH . C 3 HOH A 6 906 12 HOH HOH . C 3 HOH A 7 907 41 HOH HOH . C 3 HOH A 8 908 127 HOH HOH . C 3 HOH A 9 909 49 HOH HOH . C 3 HOH A 10 910 134 HOH HOH . C 3 HOH A 11 911 121 HOH HOH . C 3 HOH A 12 912 77 HOH HOH . C 3 HOH A 13 913 3 HOH HOH . C 3 HOH A 14 914 89 HOH HOH . C 3 HOH A 15 915 119 HOH HOH . C 3 HOH A 16 916 100 HOH HOH . C 3 HOH A 17 917 150 HOH HOH . C 3 HOH A 18 918 94 HOH HOH . C 3 HOH A 19 919 17 HOH HOH . C 3 HOH A 20 920 62 HOH HOH . C 3 HOH A 21 921 37 HOH HOH . C 3 HOH A 22 922 68 HOH HOH . C 3 HOH A 23 923 35 HOH HOH . C 3 HOH A 24 924 64 HOH HOH . C 3 HOH A 25 925 32 HOH HOH . C 3 HOH A 26 926 2 HOH HOH . C 3 HOH A 27 927 9 HOH HOH . C 3 HOH A 28 928 82 HOH HOH . C 3 HOH A 29 929 54 HOH HOH . C 3 HOH A 30 930 16 HOH HOH . C 3 HOH A 31 931 53 HOH HOH . C 3 HOH A 32 932 65 HOH HOH . C 3 HOH A 33 933 19 HOH HOH . C 3 HOH A 34 934 42 HOH HOH . C 3 HOH A 35 935 66 HOH HOH . C 3 HOH A 36 936 120 HOH HOH . C 3 HOH A 37 937 26 HOH HOH . C 3 HOH A 38 938 108 HOH HOH . C 3 HOH A 39 939 22 HOH HOH . C 3 HOH A 40 940 104 HOH HOH . C 3 HOH A 41 941 125 HOH HOH . C 3 HOH A 42 942 130 HOH HOH . C 3 HOH A 43 943 115 HOH HOH . C 3 HOH A 44 944 34 HOH HOH . C 3 HOH A 45 945 45 HOH HOH . C 3 HOH A 46 946 6 HOH HOH . C 3 HOH A 47 947 46 HOH HOH . C 3 HOH A 48 948 90 HOH HOH . C 3 HOH A 49 949 14 HOH HOH . C 3 HOH A 50 950 27 HOH HOH . C 3 HOH A 51 951 71 HOH HOH . C 3 HOH A 52 952 113 HOH HOH . C 3 HOH A 53 953 1 HOH HOH . C 3 HOH A 54 954 111 HOH HOH . C 3 HOH A 55 955 107 HOH HOH . C 3 HOH A 56 956 114 HOH HOH . C 3 HOH A 57 957 36 HOH HOH . C 3 HOH A 58 958 7 HOH HOH . C 3 HOH A 59 959 102 HOH HOH . C 3 HOH A 60 960 67 HOH HOH . C 3 HOH A 61 961 8 HOH HOH . C 3 HOH A 62 962 147 HOH HOH . C 3 HOH A 63 963 122 HOH HOH . C 3 HOH A 64 964 60 HOH HOH . C 3 HOH A 65 965 76 HOH HOH . C 3 HOH A 66 966 83 HOH HOH . C 3 HOH A 67 967 31 HOH HOH . C 3 HOH A 68 968 97 HOH HOH . C 3 HOH A 69 969 15 HOH HOH . C 3 HOH A 70 970 18 HOH HOH . C 3 HOH A 71 971 29 HOH HOH . C 3 HOH A 72 972 25 HOH HOH . C 3 HOH A 73 973 63 HOH HOH . C 3 HOH A 74 974 109 HOH HOH . C 3 HOH A 75 975 84 HOH HOH . C 3 HOH A 76 976 123 HOH HOH . C 3 HOH A 77 977 141 HOH HOH . C 3 HOH A 78 978 129 HOH HOH . C 3 HOH A 79 979 20 HOH HOH . C 3 HOH A 80 980 70 HOH HOH . C 3 HOH A 81 981 48 HOH HOH . C 3 HOH A 82 982 86 HOH HOH . C 3 HOH A 83 983 21 HOH HOH . C 3 HOH A 84 984 96 HOH HOH . C 3 HOH A 85 985 118 HOH HOH . C 3 HOH A 86 986 40 HOH HOH . C 3 HOH A 87 987 28 HOH HOH . C 3 HOH A 88 988 5 HOH HOH . C 3 HOH A 89 989 33 HOH HOH . C 3 HOH A 90 990 13 HOH HOH . C 3 HOH A 91 991 38 HOH HOH . C 3 HOH A 92 992 72 HOH HOH . C 3 HOH A 93 993 149 HOH HOH . C 3 HOH A 94 994 145 HOH HOH . C 3 HOH A 95 995 73 HOH HOH . C 3 HOH A 96 996 4 HOH HOH . C 3 HOH A 97 997 44 HOH HOH . C 3 HOH A 98 998 43 HOH HOH . C 3 HOH A 99 999 140 HOH HOH . C 3 HOH A 100 1000 112 HOH HOH . C 3 HOH A 101 1001 10 HOH HOH . C 3 HOH A 102 1002 39 HOH HOH . C 3 HOH A 103 1003 128 HOH HOH . C 3 HOH A 104 1004 93 HOH HOH . C 3 HOH A 105 1005 144 HOH HOH . C 3 HOH A 106 1006 57 HOH HOH . C 3 HOH A 107 1007 79 HOH HOH . C 3 HOH A 108 1008 23 HOH HOH . C 3 HOH A 109 1009 85 HOH HOH . C 3 HOH A 110 1010 99 HOH HOH . C 3 HOH A 111 1011 148 HOH HOH . C 3 HOH A 112 1012 103 HOH HOH . C 3 HOH A 113 1013 55 HOH HOH . C 3 HOH A 114 1014 143 HOH HOH . C 3 HOH A 115 1015 136 HOH HOH . C 3 HOH A 116 1016 151 HOH HOH . C 3 HOH A 117 1017 92 HOH HOH . C 3 HOH A 118 1018 152 HOH HOH . C 3 HOH A 119 1019 116 HOH HOH . C 3 HOH A 120 1020 138 HOH HOH . C 3 HOH A 121 1021 98 HOH HOH . C 3 HOH A 122 1022 135 HOH HOH . C 3 HOH A 123 1023 131 HOH HOH . C 3 HOH A 124 1024 88 HOH HOH . C 3 HOH A 125 1025 74 HOH HOH . C 3 HOH A 126 1026 50 HOH HOH . C 3 HOH A 127 1027 30 HOH HOH . C 3 HOH A 128 1028 47 HOH HOH . C 3 HOH A 129 1029 110 HOH HOH . C 3 HOH A 130 1030 61 HOH HOH . C 3 HOH A 131 1031 95 HOH HOH . C 3 HOH A 132 1032 106 HOH HOH . C 3 HOH A 133 1033 124 HOH HOH . C 3 HOH A 134 1034 146 HOH HOH . C 3 HOH A 135 1035 105 HOH HOH . C 3 HOH A 136 1036 78 HOH HOH . C 3 HOH A 137 1037 81 HOH HOH . C 3 HOH A 138 1038 59 HOH HOH . C 3 HOH A 139 1039 69 HOH HOH . C 3 HOH A 140 1040 87 HOH HOH . C 3 HOH A 141 1041 80 HOH HOH . C 3 HOH A 142 1042 52 HOH HOH . C 3 HOH A 143 1043 24 HOH HOH . C 3 HOH A 144 1044 101 HOH HOH . C 3 HOH A 145 1045 142 HOH HOH . C 3 HOH A 146 1046 51 HOH HOH . C 3 HOH A 147 1047 117 HOH HOH . C 3 HOH A 148 1048 58 HOH HOH . C 3 HOH A 149 1049 132 HOH HOH . C 3 HOH A 150 1050 153 HOH HOH . C 3 HOH A 151 1051 126 HOH HOH . C 3 HOH A 152 1052 75 HOH HOH . C 3 HOH A 153 1053 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 9KT . . . B 2 7.038 -11.134 4.812 1 34.44 ? C2 9KT 801 A 1 HETATM 2 C C3 9KT . . . B 2 6.513 -10.398 5.871 1 38.28 ? C3 9KT 801 A 1 HETATM 3 C C4 9KT . . . B 2 7.319 -10.07 6.96 1 42.66 ? C4 9KT 801 A 1 HETATM 4 C C5 9KT . . . B 2 8.648 -10.482 6.985 1 42.65 ? C5 9KT 801 A 1 HETATM 5 C C6 9KT . . . B 2 9.172 -11.217 5.927 1 40.3 ? C6 9KT 801 A 1 HETATM 6 C C7 9KT . . . B 2 8.365 -11.546 4.841 1 34.55 ? C7 9KT 801 A 1 HETATM 7 C C10 9KT . . . B 2 10.273 -12.693 3.822 1 42.55 ? C10 9KT 801 A 1 HETATM 8 C C1 9KT . . . B 2 4.844 -11.011 3.744 1 44.01 ? C1 9KT 801 A 1 HETATM 9 C C8 9KT . . . B 2 8.077 -12.56 2.77 1 33.95 ? C8 9KT 801 A 1 HETATM 10 C C9 9KT . . . B 2 6.755 -12.157 2.741 1 38.41 ? C9 9KT 801 A 1 HETATM 11 N N1 9KT . . . B 2 6.258 -11.45 3.764 1 36.49 ? N1 9KT 801 A 1 HETATM 12 N N2 9KT . . . B 2 8.859 -12.25 3.816 1 33.97 ? N2 9KT 801 A 1 HETATM 13 O O1 9KT . . . B 2 8.537 -13.208 1.837 1 31.38 ? O1 9KT 801 A 1 HETATM 14 O O2 9KT . . . B 2 6.045 -12.453 1.78 1 37.16 ? O2 9KT 801 A 1 # _model_server_stats.io_time_ms 77 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #