data_5O6P # _model_server_result.job_id u8b-8AcakKBC1xRfxvqn9g _model_server_result.datetime_utc '2024-12-02 08:09:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5o6p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5O6P # _exptl.entry_id 5O6P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5O6P _cell.length_a 31.75 _cell.length_b 68.3 _cell.length_c 83.23 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O6P _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 8 A ASP 8 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc2 A O ASN 10 A ASN 10 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc3 A OD1 ASP 170 A ASP 170 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc4 B O1X B16 . A B16 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc5 C MG MG . A MG 302 1_555 D O HOH . A HOH 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc6 C MG MG . A MG 302 1_555 D O HOH . A HOH 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5O6P _atom_sites.fract_transf_matrix[1][1] 0.031496 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014641 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012015 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B16 A 1 301 1 B16 DRG . C 3 MG A 1 302 1 MG MG . D 4 HOH A 1 401 67 HOH HOH . D 4 HOH A 2 402 58 HOH HOH . D 4 HOH A 3 403 50 HOH HOH . D 4 HOH A 4 404 59 HOH HOH . D 4 HOH A 5 405 42 HOH HOH . D 4 HOH A 6 406 25 HOH HOH . D 4 HOH A 7 407 8 HOH HOH . D 4 HOH A 8 408 23 HOH HOH . D 4 HOH A 9 409 60 HOH HOH . D 4 HOH A 10 410 10 HOH HOH . D 4 HOH A 11 411 76 HOH HOH . D 4 HOH A 12 412 13 HOH HOH . D 4 HOH A 13 413 29 HOH HOH . D 4 HOH A 14 414 31 HOH HOH . D 4 HOH A 15 415 30 HOH HOH . D 4 HOH A 16 416 36 HOH HOH . D 4 HOH A 17 417 27 HOH HOH . D 4 HOH A 18 418 28 HOH HOH . D 4 HOH A 19 419 73 HOH HOH . D 4 HOH A 20 420 7 HOH HOH . D 4 HOH A 21 421 71 HOH HOH . D 4 HOH A 22 422 38 HOH HOH . D 4 HOH A 23 423 11 HOH HOH . D 4 HOH A 24 424 39 HOH HOH . D 4 HOH A 25 425 51 HOH HOH . D 4 HOH A 26 426 56 HOH HOH . D 4 HOH A 27 427 43 HOH HOH . D 4 HOH A 28 428 32 HOH HOH . D 4 HOH A 29 429 6 HOH HOH . D 4 HOH A 30 430 57 HOH HOH . D 4 HOH A 31 431 75 HOH HOH . D 4 HOH A 32 432 74 HOH HOH . D 4 HOH A 33 433 78 HOH HOH . D 4 HOH A 34 434 24 HOH HOH . D 4 HOH A 35 435 15 HOH HOH . D 4 HOH A 36 436 1 HOH HOH . D 4 HOH A 37 437 40 HOH HOH . D 4 HOH A 38 438 41 HOH HOH . D 4 HOH A 39 439 37 HOH HOH . D 4 HOH A 40 440 62 HOH HOH . D 4 HOH A 41 441 64 HOH HOH . D 4 HOH A 42 442 34 HOH HOH . D 4 HOH A 43 443 45 HOH HOH . D 4 HOH A 44 444 70 HOH HOH . D 4 HOH A 45 445 14 HOH HOH . D 4 HOH A 46 446 52 HOH HOH . D 4 HOH A 47 447 33 HOH HOH . D 4 HOH A 48 448 49 HOH HOH . D 4 HOH A 49 449 3 HOH HOH . D 4 HOH A 50 450 4 HOH HOH . D 4 HOH A 51 451 17 HOH HOH . D 4 HOH A 52 452 35 HOH HOH . D 4 HOH A 53 453 65 HOH HOH . D 4 HOH A 54 454 48 HOH HOH . D 4 HOH A 55 455 66 HOH HOH . D 4 HOH A 56 456 22 HOH HOH . D 4 HOH A 57 457 20 HOH HOH . D 4 HOH A 58 458 53 HOH HOH . D 4 HOH A 59 459 16 HOH HOH . D 4 HOH A 60 460 26 HOH HOH . D 4 HOH A 61 461 21 HOH HOH . D 4 HOH A 62 462 72 HOH HOH . D 4 HOH A 63 463 19 HOH HOH . D 4 HOH A 64 464 61 HOH HOH . D 4 HOH A 65 465 68 HOH HOH . D 4 HOH A 66 466 5 HOH HOH . D 4 HOH A 67 467 77 HOH HOH . D 4 HOH A 68 468 47 HOH HOH . D 4 HOH A 69 469 55 HOH HOH . D 4 HOH A 70 470 54 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -11.598 _atom_site.Cartn_y -6.331 _atom_site.Cartn_z 13.665 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #