data_5O7E # _model_server_result.job_id HgYVLAJyO3wI5f5qu5RHiQ _model_server_result.datetime_utc '2024-11-27 17:38:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5o7e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":803}' # _entry.id 5O7E # _exptl.entry_id 5O7E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.265 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-(4-ethanoylphenyl)-2-sulfanyl-ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.23 _cell.angle_gamma 90 _cell.entry_id 5O7E _cell.length_a 51.304 _cell.length_b 79.677 _cell.length_c 56.959 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O7E _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 102 A GLU 430 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc2 A NE2 HIS 127 A HIS 455 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc3 A NE2 HIS 131 A HIS 459 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc4 A O GLY 135 A GLY 463 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc5 A O VAL 139 A VAL 467 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc6 A O GLY 141 A GLY 469 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc7 A OE1 GLU 159 A GLU 487 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc8 B ZN ZN . A ZN 801 1_555 D SAD 9NB . A 9NB 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc9 C CA CA . A CA 802 1_555 E O HOH . A HOH 924 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc10 C CA CA . A CA 802 1_555 E O HOH . A HOH 930 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? # _chem_comp.formula 'C10 H11 N O2 S' _chem_comp.formula_weight 209.265 _chem_comp.id 9NB _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-(4-ethanoylphenyl)-2-sulfanyl-ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAK 9NB sing 1 n n CAK OAB 9NB doub 2 n n CAK CAN 9NB sing 3 n n CAG CAN 9NB doub 4 n y CAG CAE 9NB sing 5 n y CAN CAH 9NB sing 6 n y CAE CAM 9NB doub 7 n y CAH CAF 9NB doub 8 n y CAM CAF 9NB sing 9 n y CAM NAJ 9NB sing 10 n n NAJ CAL 9NB sing 11 n n SAD CAI 9NB sing 12 n n CAL OAC 9NB doub 13 n n CAL CAI 9NB sing 14 n n SAD H1 9NB sing 15 n n CAI H2 9NB sing 16 n n CAI H3 9NB sing 17 n n NAJ H4 9NB sing 18 n n CAE H5 9NB sing 19 n n CAG H6 9NB sing 20 n n CAA H7 9NB sing 21 n n CAA H8 9NB sing 22 n n CAA H9 9NB sing 23 n n CAH H10 9NB sing 24 n n CAF H11 9NB sing 25 n n # _atom_sites.entry_id 5O7E _atom_sites.fract_transf_matrix[1][1] 0.019492 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000418 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017561 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 801 1722 ZN ZN . C 3 CA A 1 802 1723 CA CA . D 4 9NB A 1 803 1 9NB DRG . E 5 HOH A 1 901 112 HOH HOH . E 5 HOH A 2 902 110 HOH HOH . E 5 HOH A 3 903 116 HOH HOH . E 5 HOH A 4 904 85 HOH HOH . E 5 HOH A 5 905 55 HOH HOH . E 5 HOH A 6 906 23 HOH HOH . E 5 HOH A 7 907 57 HOH HOH . E 5 HOH A 8 908 49 HOH HOH . E 5 HOH A 9 909 97 HOH HOH . E 5 HOH A 10 910 69 HOH HOH . E 5 HOH A 11 911 115 HOH HOH . E 5 HOH A 12 912 61 HOH HOH . E 5 HOH A 13 913 34 HOH HOH . E 5 HOH A 14 914 25 HOH HOH . E 5 HOH A 15 915 31 HOH HOH . E 5 HOH A 16 916 36 HOH HOH . E 5 HOH A 17 917 15 HOH HOH . E 5 HOH A 18 918 19 HOH HOH . E 5 HOH A 19 919 26 HOH HOH . E 5 HOH A 20 920 9 HOH HOH . E 5 HOH A 21 921 114 HOH HOH . E 5 HOH A 22 922 102 HOH HOH . E 5 HOH A 23 923 17 HOH HOH . E 5 HOH A 24 924 20 HOH HOH . E 5 HOH A 25 925 58 HOH HOH . E 5 HOH A 26 926 40 HOH HOH . E 5 HOH A 27 927 10 HOH HOH . E 5 HOH A 28 928 100 HOH HOH . E 5 HOH A 29 929 73 HOH HOH . E 5 HOH A 30 930 18 HOH HOH . E 5 HOH A 31 931 81 HOH HOH . E 5 HOH A 32 932 21 HOH HOH . E 5 HOH A 33 933 67 HOH HOH . E 5 HOH A 34 934 12 HOH HOH . E 5 HOH A 35 935 46 HOH HOH . E 5 HOH A 36 936 6 HOH HOH . E 5 HOH A 37 937 33 HOH HOH . E 5 HOH A 38 938 37 HOH HOH . E 5 HOH A 39 939 96 HOH HOH . E 5 HOH A 40 940 35 HOH HOH . E 5 HOH A 41 941 56 HOH HOH . E 5 HOH A 42 942 24 HOH HOH . E 5 HOH A 43 943 29 HOH HOH . E 5 HOH A 44 944 38 HOH HOH . E 5 HOH A 45 945 27 HOH HOH . E 5 HOH A 46 946 62 HOH HOH . E 5 HOH A 47 947 3 HOH HOH . E 5 HOH A 48 948 82 HOH HOH . E 5 HOH A 49 949 51 HOH HOH . E 5 HOH A 50 950 99 HOH HOH . E 5 HOH A 51 951 48 HOH HOH . E 5 HOH A 52 952 5 HOH HOH . E 5 HOH A 53 953 39 HOH HOH . E 5 HOH A 54 954 75 HOH HOH . E 5 HOH A 55 955 16 HOH HOH . E 5 HOH A 56 956 89 HOH HOH . E 5 HOH A 57 957 42 HOH HOH . E 5 HOH A 58 958 8 HOH HOH . E 5 HOH A 59 959 50 HOH HOH . E 5 HOH A 60 960 95 HOH HOH . E 5 HOH A 61 961 108 HOH HOH . E 5 HOH A 62 962 13 HOH HOH . E 5 HOH A 63 963 70 HOH HOH . E 5 HOH A 64 964 72 HOH HOH . E 5 HOH A 65 965 90 HOH HOH . E 5 HOH A 66 966 11 HOH HOH . E 5 HOH A 67 967 2 HOH HOH . E 5 HOH A 68 968 113 HOH HOH . E 5 HOH A 69 969 68 HOH HOH . E 5 HOH A 70 970 104 HOH HOH . E 5 HOH A 71 971 84 HOH HOH . E 5 HOH A 72 972 1 HOH HOH . E 5 HOH A 73 973 28 HOH HOH . E 5 HOH A 74 974 59 HOH HOH . E 5 HOH A 75 975 47 HOH HOH . E 5 HOH A 76 976 105 HOH HOH . E 5 HOH A 77 977 45 HOH HOH . E 5 HOH A 78 978 22 HOH HOH . E 5 HOH A 79 979 77 HOH HOH . E 5 HOH A 80 980 101 HOH HOH . E 5 HOH A 81 981 14 HOH HOH . E 5 HOH A 82 982 41 HOH HOH . E 5 HOH A 83 983 30 HOH HOH . E 5 HOH A 84 984 109 HOH HOH . E 5 HOH A 85 985 43 HOH HOH . E 5 HOH A 86 986 98 HOH HOH . E 5 HOH A 87 987 63 HOH HOH . E 5 HOH A 88 988 65 HOH HOH . E 5 HOH A 89 989 83 HOH HOH . E 5 HOH A 90 990 7 HOH HOH . E 5 HOH A 91 991 54 HOH HOH . E 5 HOH A 92 992 87 HOH HOH . E 5 HOH A 93 993 71 HOH HOH . E 5 HOH A 94 994 94 HOH HOH . E 5 HOH A 95 995 60 HOH HOH . E 5 HOH A 96 996 91 HOH HOH . E 5 HOH A 97 997 52 HOH HOH . E 5 HOH A 98 998 53 HOH HOH . E 5 HOH A 99 999 44 HOH HOH . E 5 HOH A 100 1000 103 HOH HOH . E 5 HOH A 101 1001 32 HOH HOH . E 5 HOH A 102 1002 79 HOH HOH . E 5 HOH A 103 1003 4 HOH HOH . E 5 HOH A 104 1004 86 HOH HOH . E 5 HOH A 105 1005 88 HOH HOH . E 5 HOH A 106 1006 80 HOH HOH . E 5 HOH A 107 1007 64 HOH HOH . E 5 HOH A 108 1008 111 HOH HOH . E 5 HOH A 109 1009 74 HOH HOH . E 5 HOH A 110 1010 92 HOH HOH . E 5 HOH A 111 1011 106 HOH HOH . E 5 HOH A 112 1012 66 HOH HOH . E 5 HOH A 113 1013 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S SAD 9NB . . . D 4 15.549 5.339 17.517 1 37.37 ? SAD 9NB 803 A 1 HETATM 2 C CAI 9NB . . . D 4 15.163 3.865 18.549 1 38.38 ? CAI 9NB 803 A 1 HETATM 3 C CAL 9NB . . . D 4 13.985 3.042 17.987 1 39.6 ? CAL 9NB 803 A 1 HETATM 4 O OAC 9NB . . . D 4 12.836 3.429 18.213 1 35.37 ? OAC 9NB 803 A 1 HETATM 5 N NAJ 9NB . . . D 4 14.357 2.081 17.104 1 35.06 ? NAJ 9NB 803 A 1 HETATM 6 C CAM 9NB . . . D 4 13.498 1.243 16.488 1 30.3 ? CAM 9NB 803 A 1 HETATM 7 C CAE 9NB . . . D 4 14.006 0.486 15.439 1 28.54 ? CAE 9NB 803 A 1 HETATM 8 C CAG 9NB . . . D 4 13.189 -0.333 14.664 1 22.52 ? CAG 9NB 803 A 1 HETATM 9 C CAN 9NB . . . D 4 11.831 -0.444 14.94 1 26.71 ? CAN 9NB 803 A 1 HETATM 10 C CAK 9NB . . . D 4 10.983 -1.23 14.155 1 30.6 ? CAK 9NB 803 A 1 HETATM 11 O OAB 9NB . . . D 4 9.827 -1.495 14.492 1 29.2 ? OAB 9NB 803 A 1 HETATM 12 C CAA 9NB . . . D 4 11.594 -1.83 12.89 1 25.75 ? CAA 9NB 803 A 1 HETATM 13 C CAH 9NB . . . D 4 11.297 0.36 15.933 1 25.56 ? CAH 9NB 803 A 1 HETATM 14 C CAF 9NB . . . D 4 12.113 1.217 16.669 1 24.79 ? CAF 9NB 803 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 14 #