data_5O8P
#
_model_server_result.job_id            -_g0IaTINQng5JJYlJWGBQ 
_model_server_result.datetime_utc      '2024-12-04 17:54:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5o8p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    5O8P 
#
_exptl.entry_id    5O8P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5O8P 
_cell.length_a            164.09 
_cell.length_b            164.09 
_cell.length_c            168.54 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5O8P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
B,C,E 1 1,4 
A,D 1 2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_545 -y+1/2,x-1/2,z+1/4 0 -1 0 1 0 0 0 0 1 82.045 -82.045 42.135 
3 'crystal symmetry operation' 6_455 x-1/2,-y+1/2,-z+3/4 1 0 0 0 -1 0 0 0 -1 -82.045 82.045 126.405 
4 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 168.54 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     5O8P 
_atom_sites.fract_transf_matrix[1][1]    0.006094 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006094 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005933 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD B 1 501 1 FAD FAD . 
D 3 HOH A 1 501 16 HOH HOH . 
D 3 HOH A 2 502 30 HOH HOH . 
D 3 HOH A 3 503 8 HOH HOH . 
D 3 HOH A 4 504 25 HOH HOH . 
D 3 HOH A 5 505 3 HOH HOH . 
D 3 HOH A 6 506 1 HOH HOH . 
D 3 HOH A 7 507 9 HOH HOH . 
D 3 HOH A 8 508 17 HOH HOH . 
D 3 HOH A 9 509 5 HOH HOH . 
D 3 HOH A 10 510 12 HOH HOH . 
D 3 HOH A 11 511 26 HOH HOH . 
D 3 HOH A 12 512 21 HOH HOH . 
E 3 HOH B 1 601 23 HOH HOH . 
E 3 HOH B 2 602 6 HOH HOH . 
E 3 HOH B 3 603 36 HOH HOH . 
E 3 HOH B 4 604 2 HOH HOH . 
E 3 HOH B 5 605 33 HOH HOH . 
E 3 HOH B 6 606 13 HOH HOH . 
E 3 HOH B 7 607 35 HOH HOH . 
E 3 HOH B 8 608 22 HOH HOH . 
E 3 HOH B 9 609 4 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 2 81.045 50.469 64.893 1 81.94 ? PA FAD 501 B 1 
HETATM 2 O O1A FAD . . . C 2 81.204 51.336 66.128 1 74.09 ? O1A FAD 501 B 1 
HETATM 3 O O2A FAD . . . C 2 80.822 51.126 63.552 1 70.04 ? O2A FAD 501 B 1 
HETATM 4 O O5B FAD . . . C 2 82.374 49.552 64.843 1 89.76 ? O5B FAD 501 B 1 
HETATM 5 C C5B FAD . . . C 2 83.25 49.526 63.721 1 93.35 ? C5B FAD 501 B 1 
HETATM 6 C C4B FAD . . . C 2 84.72 49.432 64.113 1 92.51 ? C4B FAD 501 B 1 
HETATM 7 O O4B FAD . . . C 2 85.482 48.977 62.984 1 91.14 ? O4B FAD 501 B 1 
HETATM 8 C C3B FAD . . . C 2 85.308 50.781 64.512 1 92.41 ? C3B FAD 501 B 1 
HETATM 9 O O3B FAD . . . C 2 86.046 50.621 65.731 1 71.22 ? O3B FAD 501 B 1 
HETATM 10 C C2B FAD . . . C 2 86.169 51.194 63.319 1 93.74 ? C2B FAD 501 B 1 
HETATM 11 O O2B FAD . . . C 2 87.314 51.98 63.665 1 102.75 ? O2B FAD 501 B 1 
HETATM 12 C C1B FAD . . . C 2 86.596 49.852 62.756 1 89.91 ? C1B FAD 501 B 1 
HETATM 13 N N9A FAD . . . C 2 87.061 49.85 61.342 1 89.25 ? N9A FAD 501 B 1 
HETATM 14 C C8A FAD . . . C 2 86.458 50.362 60.249 1 89.69 ? C8A FAD 501 B 1 
HETATM 15 N N7A FAD . . . C 2 87.219 50.143 59.14 1 85.07 ? N7A FAD 501 B 1 
HETATM 16 C C5A FAD . . . C 2 88.33 49.478 59.523 1 83.69 ? C5A FAD 501 B 1 
HETATM 17 C C6A FAD . . . C 2 89.556 48.932 58.878 1 80.99 ? C6A FAD 501 B 1 
HETATM 18 N N6A FAD . . . C 2 89.76 49.055 57.544 1 86.95 ? N6A FAD 501 B 1 
HETATM 19 N N1A FAD . . . C 2 90.467 48.301 59.665 1 75.99 ? N1A FAD 501 B 1 
HETATM 20 C C2A FAD . . . C 2 90.292 48.165 60.997 1 77.16 ? C2A FAD 501 B 1 
HETATM 21 N N3A FAD . . . C 2 89.211 48.643 61.643 1 71.15 ? N3A FAD 501 B 1 
HETATM 22 C C4A FAD . . . C 2 88.216 49.29 60.977 1 82.7 ? C4A FAD 501 B 1 
HETATM 23 N N1 FAD . . . C 2 71.428 50.412 68.47 1 100.83 ? N1 FAD 501 B 1 
HETATM 24 C C2 FAD . . . C 2 70.742 49.786 69.462 1 100.06 ? C2 FAD 501 B 1 
HETATM 25 O O2 FAD . . . C 2 70.266 48.653 69.225 1 91.22 ? O2 FAD 501 B 1 
HETATM 26 N N3 FAD . . . C 2 70.569 50.34 70.683 1 100.91 ? N3 FAD 501 B 1 
HETATM 27 C C4 FAD . . . C 2 71.061 51.554 70.99 1 95.54 ? C4 FAD 501 B 1 
HETATM 28 O O4 FAD . . . C 2 70.883 52.046 72.121 1 90.37 ? O4 FAD 501 B 1 
HETATM 29 C C4X FAD . . . C 2 71.823 52.304 69.96 1 93.34 ? C4X FAD 501 B 1 
HETATM 30 N N5 FAD . . . C 2 72.346 53.525 70.206 1 83.55 ? N5 FAD 501 B 1 
HETATM 31 C C5X FAD . . . C 2 73.033 54.184 69.243 1 95.47 ? C5X FAD 501 B 1 
HETATM 32 C C6 FAD . . . C 2 73.547 55.441 69.553 1 103.36 ? C6 FAD 501 B 1 
HETATM 33 C C7 FAD . . . C 2 74.266 56.178 68.615 1 104.55 ? C7 FAD 501 B 1 
HETATM 34 C C7M FAD . . . C 2 74.81 57.539 68.974 1 95.8 ? C7M FAD 501 B 1 
HETATM 35 C C8 FAD . . . C 2 74.485 55.603 67.256 1 103.41 ? C8 FAD 501 B 1 
HETATM 36 C C8M FAD . . . C 2 75.258 56.379 66.224 1 98.1 ? C8M FAD 501 B 1 
HETATM 37 C C9 FAD . . . C 2 73.971 54.346 66.934 1 105.69 ? C9 FAD 501 B 1 
HETATM 38 C C9A FAD . . . C 2 73.244 53.59 67.872 1 105.54 ? C9A FAD 501 B 1 
HETATM 39 N N10 FAD . . . C 2 72.7 52.291 67.59 1 112.87 ? N10 FAD 501 B 1 
HETATM 40 C C10 FAD . . . C 2 71.981 51.642 68.633 1 101.91 ? C10 FAD 501 B 1 
HETATM 41 C C1' FAD . . . C 2 72.847 51.594 66.283 1 113.15 ? C1' FAD 501 B 1 
HETATM 42 C C2' FAD . . . C 2 74.05 50.622 66.258 1 109.04 ? C2' FAD 501 B 1 
HETATM 43 O O2' FAD . . . C 2 74.065 49.808 67.449 1 95.16 ? O2' FAD 501 B 1 
HETATM 44 C C3' FAD . . . C 2 75.413 51.321 66.095 1 102.86 ? C3' FAD 501 B 1 
HETATM 45 O O3' FAD . . . C 2 75.458 52.051 64.859 1 101.1 ? O3' FAD 501 B 1 
HETATM 46 C C4' FAD . . . C 2 76.603 50.353 66.132 1 97.6 ? C4' FAD 501 B 1 
HETATM 47 O O4' FAD . . . C 2 77.772 51.051 66.576 1 78.97 ? O4' FAD 501 B 1 
HETATM 48 C C5' FAD . . . C 2 76.896 49.721 64.774 1 99.5 ? C5' FAD 501 B 1 
HETATM 49 O O5' FAD . . . C 2 77.608 48.498 64.973 1 99.51 ? O5' FAD 501 B 1 
HETATM 50 P P FAD . . . C 2 79.071 48.298 64.354 1 83.7 ? P FAD 501 B 1 
HETATM 51 O O1P FAD . . . C 2 79.584 46.943 64.796 1 76.54 ? O1P FAD 501 B 1 
HETATM 52 O O2P FAD . . . C 2 78.888 48.594 62.892 1 68.07 ? O2P FAD 501 B 1 
HETATM 53 O O3P FAD . . . C 2 79.806 49.464 65.221 1 95.5 ? O3P FAD 501 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           53 
#