data_5O8Y # _model_server_result.job_id VUibqrmRsb4fRkCifIz49w _model_server_result.datetime_utc '2024-10-10 06:25:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5o8y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":301}' # _entry.id 5O8Y # _exptl.entry_id 5O8Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 354.436 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5O8Y _cell.length_a 108.83 _cell.length_b 108.83 _cell.length_c 306.538 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O8Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 K N N # _chem_comp.formula 'C16 H34 O8' _chem_comp.formula_weight 354.436 _chem_comp.id PE4 _chem_comp.mon_nstd_flag . _chem_comp.name 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG4000' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PE4 sing 224 n n O1 HO1 PE4 sing 225 n n C1 C2 PE4 sing 226 n n C1 H11 PE4 sing 227 n n C1 H12 PE4 sing 228 n n C2 O2 PE4 sing 229 n n C2 H21 PE4 sing 230 n n C2 H22 PE4 sing 231 n n O2 C3 PE4 sing 232 n n C3 C4 PE4 sing 233 n n C3 H31 PE4 sing 234 n n C3 H32 PE4 sing 235 n n C4 O3 PE4 sing 236 n n C4 H41 PE4 sing 237 n n C4 H42 PE4 sing 238 n n O3 C5 PE4 sing 239 n n C5 C6 PE4 sing 240 n n C5 H51 PE4 sing 241 n n C5 H52 PE4 sing 242 n n C6 O4 PE4 sing 243 n n C6 H61 PE4 sing 244 n n C6 H62 PE4 sing 245 n n O4 C7 PE4 sing 246 n n C7 C8 PE4 sing 247 n n C7 H71 PE4 sing 248 n n C7 H72 PE4 sing 249 n n C8 O5 PE4 sing 250 n n C8 H81 PE4 sing 251 n n C8 H82 PE4 sing 252 n n O5 C9 PE4 sing 253 n n C9 C10 PE4 sing 254 n n C9 H91 PE4 sing 255 n n C9 H92 PE4 sing 256 n n C10 O6 PE4 sing 257 n n C10 H101 PE4 sing 258 n n C10 H102 PE4 sing 259 n n O6 C11 PE4 sing 260 n n C11 C12 PE4 sing 261 n n C11 H111 PE4 sing 262 n n C11 H112 PE4 sing 263 n n C12 O7 PE4 sing 264 n n C12 H121 PE4 sing 265 n n C12 H122 PE4 sing 266 n n O7 C13 PE4 sing 267 n n C13 C14 PE4 sing 268 n n C13 H131 PE4 sing 269 n n C13 H132 PE4 sing 270 n n C14 O8 PE4 sing 271 n n C14 H141 PE4 sing 272 n n C14 H142 PE4 sing 273 n n O8 C15 PE4 sing 274 n n C15 C16 PE4 sing 275 n n C15 H151 PE4 sing 276 n n C15 H152 PE4 sing 277 n n C16 H161 PE4 sing 278 n n C16 H162 PE4 sing 279 n n C16 H163 PE4 sing 280 n n # _atom_sites.entry_id 5O8Y _atom_sites.fract_transf_matrix[1][1] 0.009189 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009189 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 PE4 A 1 301 1 PE4 PE4 . H 3 SO4 A 1 302 1 SO4 SO4 . I 3 SO4 A 1 303 5 SO4 SO4 . J 3 SO4 A 1 304 9 SO4 SO4 . K 2 PE4 C 1 301 2 PE4 PE4 . L 3 SO4 C 1 302 4 SO4 SO4 . M 3 SO4 C 1 303 18 SO4 SO4 . N 3 SO4 D 1 301 14 SO4 SO4 . O 3 SO4 G 1 301 6 SO4 SO4 . P 3 SO4 F 1 301 15 SO4 SO4 . Q 3 SO4 F 1 302 17 SO4 SO4 . R 3 SO4 H 1 301 16 SO4 SO4 . S 4 HOH A 1 401 1 HOH HOH . S 4 HOH A 2 402 16 HOH HOH . S 4 HOH A 3 403 17 HOH HOH . S 4 HOH A 4 404 108 HOH HOH . S 4 HOH A 5 405 27 HOH HOH . S 4 HOH A 6 406 35 HOH HOH . S 4 HOH A 7 407 91 HOH HOH . S 4 HOH A 8 408 18 HOH HOH . S 4 HOH A 9 409 111 HOH HOH . S 4 HOH A 10 410 33 HOH HOH . S 4 HOH A 11 411 113 HOH HOH . S 4 HOH A 12 412 15 HOH HOH . S 4 HOH A 13 413 95 HOH HOH . S 4 HOH A 14 414 21 HOH HOH . S 4 HOH A 15 415 28 HOH HOH . S 4 HOH A 16 416 19 HOH HOH . S 4 HOH A 17 417 25 HOH HOH . S 4 HOH A 18 418 24 HOH HOH . S 4 HOH A 19 419 109 HOH HOH . S 4 HOH A 20 420 118 HOH HOH . S 4 HOH A 21 421 106 HOH HOH . S 4 HOH A 22 422 31 HOH HOH . S 4 HOH A 23 423 121 HOH HOH . S 4 HOH A 24 424 104 HOH HOH . S 4 HOH A 25 425 26 HOH HOH . S 4 HOH A 26 426 30 HOH HOH . S 4 HOH A 27 427 114 HOH HOH . S 4 HOH A 28 428 123 HOH HOH . S 4 HOH A 29 429 116 HOH HOH . S 4 HOH A 30 430 110 HOH HOH . T 4 HOH C 1 401 97 HOH HOH . T 4 HOH C 2 402 22 HOH HOH . T 4 HOH C 3 403 3 HOH HOH . T 4 HOH C 4 404 34 HOH HOH . T 4 HOH C 5 405 126 HOH HOH . T 4 HOH C 6 406 20 HOH HOH . T 4 HOH C 7 407 132 HOH HOH . T 4 HOH C 8 408 43 HOH HOH . T 4 HOH C 9 409 4 HOH HOH . T 4 HOH C 10 410 5 HOH HOH . T 4 HOH C 11 411 36 HOH HOH . T 4 HOH C 12 412 44 HOH HOH . T 4 HOH C 13 413 39 HOH HOH . T 4 HOH C 14 414 115 HOH HOH . T 4 HOH C 15 415 127 HOH HOH . T 4 HOH C 16 416 45 HOH HOH . T 4 HOH C 17 417 2 HOH HOH . T 4 HOH C 18 418 112 HOH HOH . T 4 HOH C 19 419 37 HOH HOH . T 4 HOH C 20 420 143 HOH HOH . T 4 HOH C 21 421 117 HOH HOH . T 4 HOH C 22 422 100 HOH HOH . T 4 HOH C 23 423 94 HOH HOH . T 4 HOH C 24 424 93 HOH HOH . T 4 HOH C 25 425 40 HOH HOH . T 4 HOH C 26 426 96 HOH HOH . U 4 HOH D 1 401 107 HOH HOH . U 4 HOH D 2 402 80 HOH HOH . U 4 HOH D 3 403 128 HOH HOH . U 4 HOH D 4 404 124 HOH HOH . U 4 HOH D 5 405 23 HOH HOH . U 4 HOH D 6 406 120 HOH HOH . U 4 HOH D 7 407 141 HOH HOH . U 4 HOH D 8 408 7 HOH HOH . U 4 HOH D 9 409 32 HOH HOH . U 4 HOH D 10 410 131 HOH HOH . U 4 HOH D 11 411 119 HOH HOH . U 4 HOH D 12 412 6 HOH HOH . U 4 HOH D 13 413 98 HOH HOH . U 4 HOH D 14 414 122 HOH HOH . V 4 HOH G 1 401 99 HOH HOH . V 4 HOH G 2 402 11 HOH HOH . V 4 HOH G 3 403 10 HOH HOH . V 4 HOH G 4 404 55 HOH HOH . V 4 HOH G 5 405 8 HOH HOH . V 4 HOH G 6 406 9 HOH HOH . V 4 HOH G 7 407 137 HOH HOH . V 4 HOH G 8 408 12 HOH HOH . V 4 HOH G 9 409 61 HOH HOH . V 4 HOH G 10 410 53 HOH HOH . V 4 HOH G 11 411 49 HOH HOH . V 4 HOH G 12 412 57 HOH HOH . V 4 HOH G 13 413 56 HOH HOH . V 4 HOH G 14 414 59 HOH HOH . V 4 HOH G 15 415 48 HOH HOH . V 4 HOH G 16 416 60 HOH HOH . V 4 HOH G 17 417 50 HOH HOH . V 4 HOH G 18 418 54 HOH HOH . V 4 HOH G 19 419 130 HOH HOH . V 4 HOH G 20 420 52 HOH HOH . V 4 HOH G 21 421 129 HOH HOH . V 4 HOH G 22 422 134 HOH HOH . V 4 HOH G 23 423 63 HOH HOH . V 4 HOH G 24 424 58 HOH HOH . V 4 HOH G 25 425 51 HOH HOH . W 4 HOH F 1 401 105 HOH HOH . W 4 HOH F 2 402 139 HOH HOH . W 4 HOH F 3 403 38 HOH HOH . W 4 HOH F 4 404 138 HOH HOH . W 4 HOH F 5 405 135 HOH HOH . W 4 HOH F 6 406 136 HOH HOH . W 4 HOH F 7 407 101 HOH HOH . W 4 HOH F 8 408 103 HOH HOH . W 4 HOH F 9 409 102 HOH HOH . W 4 HOH F 10 410 92 HOH HOH . X 4 HOH H 1 401 125 HOH HOH . X 4 HOH H 2 402 142 HOH HOH . X 4 HOH H 3 403 62 HOH HOH . X 4 HOH H 4 404 65 HOH HOH . X 4 HOH H 5 405 133 HOH HOH . X 4 HOH H 6 406 140 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PE4 . . . K 2 -14.132 -1.627 -70.318 1 66.95 ? O1 PE4 301 C 1 HETATM 2 C C1 PE4 . . . K 2 -13.618 -1.149 -69.074 1 63.79 ? C1 PE4 301 C 1 HETATM 3 C C2 PE4 . . . K 2 -14.554 -1.565 -67.954 1 64.59 ? C2 PE4 301 C 1 HETATM 4 O O2 PE4 . . . K 2 -14.053 -1.059 -66.709 1 63.28 ? O2 PE4 301 C 1 HETATM 5 C C3 PE4 . . . K 2 -15.05 -0.665 -65.758 1 61.95 ? C3 PE4 301 C 1 HETATM 6 C C4 PE4 . . . K 2 -15.744 -1.891 -65.165 1 62.86 ? C4 PE4 301 C 1 HETATM 7 O O3 PE4 . . . K 2 -17.154 -1.668 -65.097 1 62.01 ? O3 PE4 301 C 1 HETATM 8 C C5 PE4 . . . K 2 -17.861 -2.379 -66.102 1 58.96 ? C5 PE4 301 C 1 HETATM 9 C C6 PE4 . . . K 2 -19.289 -1.86 -66.199 1 58.72 ? C6 PE4 301 C 1 HETATM 10 O O4 PE4 . . . K 2 -19.617 -1.585 -67.565 1 58.39 ? O4 PE4 301 C 1 HETATM 11 C C7 PE4 . . . K 2 -19.899 -2.758 -68.324 1 55.9 ? C7 PE4 301 C 1 HETATM 12 C C8 PE4 . . . K 2 -19.526 -2.575 -69.788 1 57.87 ? C8 PE4 301 C 1 HETATM 13 O O5 PE4 . . . K 2 -18.845 -1.349 -70.053 1 58.17 ? O5 PE4 301 C 1 HETATM 14 C C9 PE4 . . . K 2 -18.617 -1.142 -71.453 1 57.61 ? C9 PE4 301 C 1 HETATM 15 C C10 PE4 . . . K 2 -17.187 -0.674 -71.663 1 57.64 ? C10 PE4 301 C 1 HETATM 16 O O6 PE4 . . . K 2 -17.151 0.74 -71.49 1 58.99 ? O6 PE4 301 C 1 HETATM 17 C C11 PE4 . . . K 2 -15.856 1.31 -71.277 1 58.3 ? C11 PE4 301 C 1 HETATM 18 C C12 PE4 . . . K 2 -16.011 2.608 -70.494 1 57.33 ? C12 PE4 301 C 1 HETATM 19 O O7 PE4 . . . K 2 -15.105 2.619 -69.397 1 55.64 ? O7 PE4 301 C 1 HETATM 20 C C13 PE4 . . . K 2 -15.612 2.06 -68.19 1 58.1 ? C13 PE4 301 C 1 HETATM 21 C C14 PE4 . . . K 2 -16.185 3.142 -67.285 1 57.15 ? C14 PE4 301 C 1 HETATM 22 O O8 PE4 . . . K 2 -17.237 2.588 -66.486 1 57.54 ? O8 PE4 301 C 1 HETATM 23 C C15 PE4 . . . K 2 -18.569 2.949 -66.887 1 56.89 ? C15 PE4 301 C 1 HETATM 24 C C16 PE4 . . . K 2 -19.536 1.835 -66.545 1 54.63 ? C16 PE4 301 C 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #