data_5O8Y # _model_server_result.job_id 7nMvhUXU3onC8Wn6pb8LAA _model_server_result.datetime_utc '2024-10-10 06:25:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5o8y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":301}' # _entry.id 5O8Y # _exptl.entry_id 5O8Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5O8Y _cell.length_a 108.83 _cell.length_b 108.83 _cell.length_c 306.538 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O8Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 J N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 334 n n S O2 SO4 doub 335 n n S O3 SO4 sing 336 n n S O4 SO4 sing 337 n n # _atom_sites.entry_id 5O8Y _atom_sites.fract_transf_matrix[1][1] 0.009189 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009189 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 PE4 A 1 301 1 PE4 PE4 . H 3 SO4 A 1 302 1 SO4 SO4 . I 3 SO4 A 1 303 5 SO4 SO4 . J 3 SO4 A 1 304 9 SO4 SO4 . K 2 PE4 C 1 301 2 PE4 PE4 . L 3 SO4 C 1 302 4 SO4 SO4 . M 3 SO4 C 1 303 18 SO4 SO4 . N 3 SO4 D 1 301 14 SO4 SO4 . O 3 SO4 G 1 301 6 SO4 SO4 . P 3 SO4 F 1 301 15 SO4 SO4 . Q 3 SO4 F 1 302 17 SO4 SO4 . R 3 SO4 H 1 301 16 SO4 SO4 . S 4 HOH A 1 401 1 HOH HOH . S 4 HOH A 2 402 16 HOH HOH . S 4 HOH A 3 403 17 HOH HOH . S 4 HOH A 4 404 108 HOH HOH . S 4 HOH A 5 405 27 HOH HOH . S 4 HOH A 6 406 35 HOH HOH . S 4 HOH A 7 407 91 HOH HOH . S 4 HOH A 8 408 18 HOH HOH . S 4 HOH A 9 409 111 HOH HOH . S 4 HOH A 10 410 33 HOH HOH . S 4 HOH A 11 411 113 HOH HOH . S 4 HOH A 12 412 15 HOH HOH . S 4 HOH A 13 413 95 HOH HOH . S 4 HOH A 14 414 21 HOH HOH . S 4 HOH A 15 415 28 HOH HOH . S 4 HOH A 16 416 19 HOH HOH . S 4 HOH A 17 417 25 HOH HOH . S 4 HOH A 18 418 24 HOH HOH . S 4 HOH A 19 419 109 HOH HOH . S 4 HOH A 20 420 118 HOH HOH . S 4 HOH A 21 421 106 HOH HOH . S 4 HOH A 22 422 31 HOH HOH . S 4 HOH A 23 423 121 HOH HOH . S 4 HOH A 24 424 104 HOH HOH . S 4 HOH A 25 425 26 HOH HOH . S 4 HOH A 26 426 30 HOH HOH . S 4 HOH A 27 427 114 HOH HOH . S 4 HOH A 28 428 123 HOH HOH . S 4 HOH A 29 429 116 HOH HOH . S 4 HOH A 30 430 110 HOH HOH . T 4 HOH C 1 401 97 HOH HOH . T 4 HOH C 2 402 22 HOH HOH . T 4 HOH C 3 403 3 HOH HOH . T 4 HOH C 4 404 34 HOH HOH . T 4 HOH C 5 405 126 HOH HOH . T 4 HOH C 6 406 20 HOH HOH . T 4 HOH C 7 407 132 HOH HOH . T 4 HOH C 8 408 43 HOH HOH . T 4 HOH C 9 409 4 HOH HOH . T 4 HOH C 10 410 5 HOH HOH . T 4 HOH C 11 411 36 HOH HOH . T 4 HOH C 12 412 44 HOH HOH . T 4 HOH C 13 413 39 HOH HOH . T 4 HOH C 14 414 115 HOH HOH . T 4 HOH C 15 415 127 HOH HOH . T 4 HOH C 16 416 45 HOH HOH . T 4 HOH C 17 417 2 HOH HOH . T 4 HOH C 18 418 112 HOH HOH . T 4 HOH C 19 419 37 HOH HOH . T 4 HOH C 20 420 143 HOH HOH . T 4 HOH C 21 421 117 HOH HOH . T 4 HOH C 22 422 100 HOH HOH . T 4 HOH C 23 423 94 HOH HOH . T 4 HOH C 24 424 93 HOH HOH . T 4 HOH C 25 425 40 HOH HOH . T 4 HOH C 26 426 96 HOH HOH . U 4 HOH D 1 401 107 HOH HOH . U 4 HOH D 2 402 80 HOH HOH . U 4 HOH D 3 403 128 HOH HOH . U 4 HOH D 4 404 124 HOH HOH . U 4 HOH D 5 405 23 HOH HOH . U 4 HOH D 6 406 120 HOH HOH . U 4 HOH D 7 407 141 HOH HOH . U 4 HOH D 8 408 7 HOH HOH . U 4 HOH D 9 409 32 HOH HOH . U 4 HOH D 10 410 131 HOH HOH . U 4 HOH D 11 411 119 HOH HOH . U 4 HOH D 12 412 6 HOH HOH . U 4 HOH D 13 413 98 HOH HOH . U 4 HOH D 14 414 122 HOH HOH . V 4 HOH G 1 401 99 HOH HOH . V 4 HOH G 2 402 11 HOH HOH . V 4 HOH G 3 403 10 HOH HOH . V 4 HOH G 4 404 55 HOH HOH . V 4 HOH G 5 405 8 HOH HOH . V 4 HOH G 6 406 9 HOH HOH . V 4 HOH G 7 407 137 HOH HOH . V 4 HOH G 8 408 12 HOH HOH . V 4 HOH G 9 409 61 HOH HOH . V 4 HOH G 10 410 53 HOH HOH . V 4 HOH G 11 411 49 HOH HOH . V 4 HOH G 12 412 57 HOH HOH . V 4 HOH G 13 413 56 HOH HOH . V 4 HOH G 14 414 59 HOH HOH . V 4 HOH G 15 415 48 HOH HOH . V 4 HOH G 16 416 60 HOH HOH . V 4 HOH G 17 417 50 HOH HOH . V 4 HOH G 18 418 54 HOH HOH . V 4 HOH G 19 419 130 HOH HOH . V 4 HOH G 20 420 52 HOH HOH . V 4 HOH G 21 421 129 HOH HOH . V 4 HOH G 22 422 134 HOH HOH . V 4 HOH G 23 423 63 HOH HOH . V 4 HOH G 24 424 58 HOH HOH . V 4 HOH G 25 425 51 HOH HOH . W 4 HOH F 1 401 105 HOH HOH . W 4 HOH F 2 402 139 HOH HOH . W 4 HOH F 3 403 38 HOH HOH . W 4 HOH F 4 404 138 HOH HOH . W 4 HOH F 5 405 135 HOH HOH . W 4 HOH F 6 406 136 HOH HOH . W 4 HOH F 7 407 101 HOH HOH . W 4 HOH F 8 408 103 HOH HOH . W 4 HOH F 9 409 102 HOH HOH . W 4 HOH F 10 410 92 HOH HOH . X 4 HOH H 1 401 125 HOH HOH . X 4 HOH H 2 402 142 HOH HOH . X 4 HOH H 3 403 62 HOH HOH . X 4 HOH H 4 404 65 HOH HOH . X 4 HOH H 5 405 133 HOH HOH . X 4 HOH H 6 406 140 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . N 3 -14.234 -0.474 -8.932 1 82.75 ? S SO4 301 D 1 HETATM 2 O O1 SO4 . . . N 3 -13.204 -1.034 -9.839 1 85.04 ? O1 SO4 301 D 1 HETATM 3 O O2 SO4 . . . N 3 -15.334 0.111 -9.723 1 81.21 ? O2 SO4 301 D 1 HETATM 4 O O3 SO4 . . . N 3 -14.801 -1.524 -8.066 1 83.59 ? O3 SO4 301 D 1 HETATM 5 O O4 SO4 . . . N 3 -13.639 0.566 -8.061 1 84.26 ? O4 SO4 301 D 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #