data_5O9E
#
_model_server_result.job_id            f2ZqOmCjzaskskwf7wDwcA 
_model_server_result.datetime_utc      '2024-12-26 23:02:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5o9e 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    5O9E 
#
_exptl.entry_id    5O9E 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5O9E 
_cell.length_a            112.89 
_cell.length_b            112.89 
_cell.length_c            44 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5O9E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     5O9E 
_atom_sites.fract_transf_matrix[1][1]    0.008858 
_atom_sites.fract_transf_matrix[1][2]    0.005114 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010229 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022727 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EDO A 1 301 1 EDO EDO . 
D 4 HOH A 1 401 79 HOH HOH . 
D 4 HOH A 2 402 130 HOH HOH . 
D 4 HOH A 3 403 90 HOH HOH . 
D 4 HOH A 4 404 36 HOH HOH . 
D 4 HOH A 5 405 42 HOH HOH . 
D 4 HOH A 6 406 85 HOH HOH . 
D 4 HOH A 7 407 122 HOH HOH . 
D 4 HOH A 8 408 66 HOH HOH . 
D 4 HOH A 9 409 67 HOH HOH . 
D 4 HOH A 10 410 16 HOH HOH . 
D 4 HOH A 11 411 45 HOH HOH . 
D 4 HOH A 12 412 48 HOH HOH . 
D 4 HOH A 13 413 1 HOH HOH . 
D 4 HOH A 14 414 61 HOH HOH . 
D 4 HOH A 15 415 60 HOH HOH . 
D 4 HOH A 16 416 100 HOH HOH . 
D 4 HOH A 17 417 120 HOH HOH . 
D 4 HOH A 18 418 7 HOH HOH . 
D 4 HOH A 19 419 65 HOH HOH . 
D 4 HOH A 20 420 8 HOH HOH . 
D 4 HOH A 21 421 26 HOH HOH . 
D 4 HOH A 22 422 56 HOH HOH . 
D 4 HOH A 23 423 13 HOH HOH . 
D 4 HOH A 24 424 128 HOH HOH . 
D 4 HOH A 25 425 31 HOH HOH . 
D 4 HOH A 26 426 87 HOH HOH . 
D 4 HOH A 27 427 29 HOH HOH . 
D 4 HOH A 28 428 78 HOH HOH . 
D 4 HOH A 29 429 53 HOH HOH . 
D 4 HOH A 30 430 6 HOH HOH . 
D 4 HOH A 31 431 104 HOH HOH . 
D 4 HOH A 32 432 28 HOH HOH . 
D 4 HOH A 33 433 50 HOH HOH . 
D 4 HOH A 34 434 11 HOH HOH . 
D 4 HOH A 35 435 76 HOH HOH . 
D 4 HOH A 36 436 59 HOH HOH . 
D 4 HOH A 37 437 129 HOH HOH . 
D 4 HOH A 38 438 47 HOH HOH . 
D 4 HOH A 39 439 41 HOH HOH . 
D 4 HOH A 40 440 57 HOH HOH . 
D 4 HOH A 41 441 37 HOH HOH . 
D 4 HOH A 42 442 2 HOH HOH . 
D 4 HOH A 43 443 27 HOH HOH . 
D 4 HOH A 44 444 69 HOH HOH . 
D 4 HOH A 45 445 21 HOH HOH . 
D 4 HOH A 46 446 10 HOH HOH . 
D 4 HOH A 47 447 99 HOH HOH . 
D 4 HOH A 48 448 131 HOH HOH . 
D 4 HOH A 49 449 72 HOH HOH . 
D 4 HOH A 50 450 33 HOH HOH . 
D 4 HOH A 51 451 64 HOH HOH . 
D 4 HOH A 52 452 86 HOH HOH . 
D 4 HOH A 53 453 14 HOH HOH . 
D 4 HOH A 54 454 97 HOH HOH . 
D 4 HOH A 55 455 20 HOH HOH . 
D 4 HOH A 56 456 68 HOH HOH . 
D 4 HOH A 57 457 84 HOH HOH . 
D 4 HOH A 58 458 62 HOH HOH . 
D 4 HOH A 59 459 58 HOH HOH . 
D 4 HOH A 60 460 118 HOH HOH . 
D 4 HOH A 61 461 117 HOH HOH . 
D 4 HOH A 62 462 63 HOH HOH . 
D 4 HOH A 63 463 75 HOH HOH . 
D 4 HOH A 64 464 4 HOH HOH . 
D 4 HOH A 65 465 70 HOH HOH . 
D 4 HOH A 66 466 46 HOH HOH . 
D 4 HOH A 67 467 17 HOH HOH . 
D 4 HOH A 68 468 103 HOH HOH . 
D 4 HOH A 69 469 18 HOH HOH . 
D 4 HOH A 70 470 12 HOH HOH . 
D 4 HOH A 71 471 71 HOH HOH . 
D 4 HOH A 72 472 127 HOH HOH . 
D 4 HOH A 73 473 22 HOH HOH . 
D 4 HOH A 74 474 30 HOH HOH . 
D 4 HOH A 75 475 19 HOH HOH . 
D 4 HOH A 76 476 126 HOH HOH . 
D 4 HOH A 77 477 32 HOH HOH . 
D 4 HOH A 78 478 82 HOH HOH . 
D 4 HOH A 79 479 44 HOH HOH . 
D 4 HOH A 80 480 15 HOH HOH . 
D 4 HOH A 81 481 88 HOH HOH . 
D 4 HOH A 82 482 73 HOH HOH . 
D 4 HOH A 83 483 3 HOH HOH . 
D 4 HOH A 84 484 93 HOH HOH . 
D 4 HOH A 85 485 94 HOH HOH . 
D 4 HOH A 86 486 9 HOH HOH . 
D 4 HOH A 87 487 132 HOH HOH . 
D 4 HOH A 88 488 55 HOH HOH . 
D 4 HOH A 89 489 110 HOH HOH . 
D 4 HOH A 90 490 112 HOH HOH . 
D 4 HOH A 91 491 40 HOH HOH . 
D 4 HOH A 92 492 135 HOH HOH . 
D 4 HOH A 93 493 125 HOH HOH . 
D 4 HOH A 94 494 89 HOH HOH . 
D 4 HOH A 95 495 108 HOH HOH . 
D 4 HOH A 96 496 101 HOH HOH . 
D 4 HOH A 97 497 119 HOH HOH . 
D 4 HOH A 98 498 124 HOH HOH . 
D 4 HOH A 99 499 123 HOH HOH . 
D 4 HOH A 100 500 121 HOH HOH . 
D 4 HOH A 101 501 107 HOH HOH . 
D 4 HOH A 102 502 96 HOH HOH . 
E 4 HOH B 1 601 133 HOH HOH . 
E 4 HOH B 2 602 39 HOH HOH . 
E 4 HOH B 3 603 114 HOH HOH . 
E 4 HOH B 4 604 74 HOH HOH . 
E 4 HOH B 5 605 5 HOH HOH . 
E 4 HOH B 6 606 106 HOH HOH . 
E 4 HOH B 7 607 35 HOH HOH . 
E 4 HOH B 8 608 102 HOH HOH . 
E 4 HOH B 9 609 51 HOH HOH . 
E 4 HOH B 10 610 80 HOH HOH . 
E 4 HOH B 11 611 115 HOH HOH . 
E 4 HOH B 12 612 24 HOH HOH . 
E 4 HOH B 13 613 25 HOH HOH . 
E 4 HOH B 14 614 43 HOH HOH . 
E 4 HOH B 15 615 49 HOH HOH . 
E 4 HOH B 16 616 95 HOH HOH . 
E 4 HOH B 17 617 77 HOH HOH . 
E 4 HOH B 18 618 34 HOH HOH . 
E 4 HOH B 19 619 52 HOH HOH . 
E 4 HOH B 20 620 23 HOH HOH . 
E 4 HOH B 21 621 54 HOH HOH . 
E 4 HOH B 22 622 91 HOH HOH . 
E 4 HOH B 23 623 116 HOH HOH . 
E 4 HOH B 24 624 83 HOH HOH . 
E 4 HOH B 25 625 136 HOH HOH . 
E 4 HOH B 26 626 92 HOH HOH . 
E 4 HOH B 27 627 134 HOH HOH . 
E 4 HOH B 28 628 38 HOH HOH . 
E 4 HOH B 29 629 109 HOH HOH . 
E 4 HOH B 30 630 105 HOH HOH . 
E 4 HOH B 31 631 111 HOH HOH . 
E 4 HOH B 32 632 113 HOH HOH . 
E 4 HOH B 33 633 81 HOH HOH . 
E 4 HOH B 34 634 98 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 35.356 11.065 28.11 1 48.21 ? C1 EDO 301 A 1 
HETATM 2 O O1 EDO . . . C 3 35.055 11.381 26.748 1 46.93 ? O1 EDO 301 A 1 
HETATM 3 C C2 EDO . . . C 3 36.83 11.332 28.403 1 48.86 ? C2 EDO 301 A 1 
HETATM 4 O O2 EDO . . . C 3 37.309 12.424 27.607 1 45.53 ? O2 EDO 301 A 1 
#
_model_server_stats.io_time_ms              77 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#