data_5OAI # _model_server_result.job_id uWbCoJ56Jwch33F_2Vqz4Q _model_server_result.datetime_utc '2025-07-31 21:02:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oai # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5OAI # _exptl.entry_id 5OAI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 495.879 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-[(1~{R})-2-(~{tert}-butylamino)-1-[methanoyl-[[3,4,5-tris(fluoranyl)phenyl]methyl]amino]-2-oxidanylidene-ethyl]-6-chloranyl-1~{H}-indole-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OAI _cell.length_a 49.731 _cell.length_b 59.216 _cell.length_c 83.897 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OAI _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H21 Cl F3 N3 O4' _chem_comp.formula_weight 495.879 _chem_comp.id B5K _chem_comp.mon_nstd_flag . _chem_comp.name '3-[(1~{R})-2-(~{tert}-butylamino)-1-[methanoyl-[[3,4,5-tris(fluoranyl)phenyl]methyl]amino]-2-oxidanylidene-ethyl]-6-chloranyl-1~{H}-indole-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 B5K sing 70 n n O1 C21 B5K doub 71 n n C2 C3 B5K doub 72 n y C2 C1 B5K sing 73 n y CL C1 B5K sing 74 n n N C3 B5K sing 75 n y N C6 B5K sing 76 n y C3 C4 B5K sing 77 n y C1 C B5K doub 78 n y C21 C6 B5K sing 79 n n C21 O2 B5K sing 80 n n C6 C7 B5K doub 81 n y C17 N2 B5K sing 82 n n C17 C20 B5K sing 83 n n C17 C19 B5K sing 84 n n N2 C9 B5K sing 85 n n C4 C7 B5K sing 86 n y C4 C5 B5K doub 87 n y C C5 B5K sing 88 n y C7 C8 B5K sing 89 n n C9 C8 B5K sing 90 n n C9 O B5K doub 91 n n C8 N1 B5K sing 92 n n F1 C15 B5K sing 93 n n F C14 B5K sing 94 n n C15 C14 B5K doub 95 n y C15 C16 B5K sing 96 n y N1 C22 B5K sing 97 n n N1 C10 B5K sing 98 n n C22 O3 B5K doub 99 n n C14 C13 B5K sing 100 n y C16 C11 B5K doub 101 n y C13 F2 B5K sing 102 n n C13 C12 B5K doub 103 n y C11 C12 B5K sing 104 n y C11 C10 B5K sing 105 n n N H1 B5K sing 106 n n C H2 B5K sing 107 n n C10 H3 B5K sing 108 n n C10 H4 B5K sing 109 n n C12 H5 B5K sing 110 n n C16 H6 B5K sing 111 n n C18 H7 B5K sing 112 n n C18 H8 B5K sing 113 n n C18 H9 B5K sing 114 n n C19 H10 B5K sing 115 n n C19 H11 B5K sing 116 n n C19 H12 B5K sing 117 n n C2 H13 B5K sing 118 n n C20 H14 B5K sing 119 n n C20 H15 B5K sing 120 n n C20 H16 B5K sing 121 n n C22 H17 B5K sing 122 n n C5 H18 B5K sing 123 n n C8 H19 B5K sing 124 n n N2 H20 B5K sing 125 n n O2 H21 B5K sing 126 n n # _atom_sites.entry_id 5OAI _atom_sites.fract_transf_matrix[1][1] 0.020108 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016887 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011919 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B5K A 1 201 1 B5K DN5 . C 3 HOH A 1 301 25 HOH HOH . C 3 HOH A 2 302 29 HOH HOH . C 3 HOH A 3 303 27 HOH HOH . C 3 HOH A 4 304 19 HOH HOH . C 3 HOH A 5 305 31 HOH HOH . C 3 HOH A 6 306 10 HOH HOH . C 3 HOH A 7 307 33 HOH HOH . C 3 HOH A 8 308 9 HOH HOH . C 3 HOH A 9 309 11 HOH HOH . C 3 HOH A 10 310 3 HOH HOH . C 3 HOH A 11 311 18 HOH HOH . C 3 HOH A 12 312 15 HOH HOH . C 3 HOH A 13 313 28 HOH HOH . C 3 HOH A 14 314 39 HOH HOH . C 3 HOH A 15 315 35 HOH HOH . C 3 HOH A 16 316 5 HOH HOH . C 3 HOH A 17 317 8 HOH HOH . C 3 HOH A 18 318 37 HOH HOH . C 3 HOH A 19 319 14 HOH HOH . C 3 HOH A 20 320 13 HOH HOH . C 3 HOH A 21 321 32 HOH HOH . C 3 HOH A 22 322 23 HOH HOH . C 3 HOH A 23 323 36 HOH HOH . C 3 HOH A 24 324 24 HOH HOH . C 3 HOH A 25 325 2 HOH HOH . C 3 HOH A 26 326 4 HOH HOH . C 3 HOH A 27 327 22 HOH HOH . C 3 HOH A 28 328 1 HOH HOH . C 3 HOH A 29 329 21 HOH HOH . C 3 HOH A 30 330 20 HOH HOH . C 3 HOH A 31 331 12 HOH HOH . C 3 HOH A 32 332 34 HOH HOH . C 3 HOH A 33 333 41 HOH HOH . C 3 HOH A 34 334 6 HOH HOH . C 3 HOH A 35 335 40 HOH HOH . C 3 HOH A 36 336 26 HOH HOH . C 3 HOH A 37 337 7 HOH HOH . C 3 HOH A 38 338 30 HOH HOH . C 3 HOH A 39 339 38 HOH HOH . C 3 HOH A 40 340 17 HOH HOH . C 3 HOH A 41 341 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N B5K . . . B 2 56.181 1.033 16.51 1 38.98 ? N B5K 201 A 1 HETATM 2 C C B5K . . . B 2 59.978 1.755 18.02 1 38.39 ? C B5K 201 A 1 HETATM 3 O O B5K . . . B 2 58.369 -3.097 20.158 1 40.01 ? O B5K 201 A 1 HETATM 4 C C1 B5K . . . B 2 59.546 2.573 16.976 1 37.89 ? C1 B5K 201 A 1 HETATM 5 C C10 B5K . . . B 2 56.667 -0.289 21.5 1 41.99 ? C10 B5K 201 A 1 HETATM 6 C C11 B5K . . . B 2 56.105 1.078 21.175 1 41 ? C11 B5K 201 A 1 HETATM 7 C C12 B5K . . . B 2 56.919 2.206 21.311 1 40.42 ? C12 B5K 201 A 1 HETATM 8 C C13 B5K . . . B 2 56.436 3.483 21.035 1 39.84 ? C13 B5K 201 A 1 HETATM 9 C C14 B5K . . . B 2 55.031 3.635 20.597 1 39.58 ? C14 B5K 201 A 1 HETATM 10 C C15 B5K . . . B 2 54.204 2.414 20.473 1 39.67 ? C15 B5K 201 A 1 HETATM 11 C C16 B5K . . . B 2 54.775 1.183 20.771 1 40.85 ? C16 B5K 201 A 1 HETATM 12 C C17 B5K . . . B 2 59.508 -3.727 17.602 1 34.01 ? C17 B5K 201 A 1 HETATM 13 C C18 B5K . . . B 2 59.585 -3.956 16.101 1 32.95 ? C18 B5K 201 A 1 HETATM 14 C C19 B5K . . . B 2 59.561 -5.093 18.283 1 34.92 ? C19 B5K 201 A 1 HETATM 15 C C2 B5K . . . B 2 58.289 2.431 16.382 1 38.25 ? C2 B5K 201 A 1 HETATM 16 C C20 B5K . . . B 2 60.72 -2.904 18.024 1 34.6 ? C20 B5K 201 A 1 HETATM 17 C C21 B5K . . . B 2 54.428 -0.678 17.159 1 41.24 ? C21 B5K 201 A 1 HETATM 18 C C22 B5K . . . B 2 55.397 -2.104 20.588 1 43.24 ? C22 B5K 201 A 1 HETATM 19 C C3 B5K . . . B 2 57.43 1.443 16.841 1 39.42 ? C3 B5K 201 A 1 HETATM 20 C C4 B5K . . . B 2 57.922 0.6 17.946 1 39.95 ? C4 B5K 201 A 1 HETATM 21 C C5 B5K . . . B 2 59.168 0.751 18.522 1 39.51 ? C5 B5K 201 A 1 HETATM 22 C C6 B5K . . . B 2 55.755 -0.004 17.273 1 40.11 ? C6 B5K 201 A 1 HETATM 23 C C7 B5K . . . B 2 56.859 -0.359 18.225 1 41.26 ? C7 B5K 201 A 1 HETATM 24 C C8 B5K . . . B 2 57.287 -1.22 19.371 1 41.65 ? C8 B5K 201 A 1 HETATM 25 C C9 B5K . . . B 2 58.018 -2.524 19.141 1 37.56 ? C9 B5K 201 A 1 HETATM 26 F F B5K . . . B 2 54.522 4.848 20.32 1 39.87 ? F B5K 201 A 1 HETATM 27 F F1 B5K . . . B 2 52.923 2.499 20.078 1 40.05 ? F1 B5K 201 A 1 HETATM 28 F F2 B5K . . . B 2 57.219 4.57 21.16 1 38.52 ? F2 B5K 201 A 1 HETATM 29 N N1 B5K . . . B 2 56.342 -1.277 20.481 1 42.58 ? N1 B5K 201 A 1 HETATM 30 N N2 B5K . . . B 2 58.288 -2.978 17.912 1 34.22 ? N2 B5K 201 A 1 HETATM 31 O O1 B5K . . . B 2 53.753 -0.478 16.124 1 41.08 ? O1 B5K 201 A 1 HETATM 32 O O2 B5K . . . B 2 53.999 -1.397 18.081 1 41.72 ? O2 B5K 201 A 1 HETATM 33 O O3 B5K . . . B 2 54.757 -2.159 21.626 1 43.54 ? O3 B5K 201 A 1 HETATM 34 CL CL B5K . . . B 2 60.659 3.844 16.39 1 36.18 ? CL B5K 201 A 1 # _model_server_stats.io_time_ms 81 _model_server_stats.parse_time_ms 80 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 423 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 34 #