data_5OC4
#
_model_server_result.job_id            23MmuxmrmdTE6B8l3HfuMg 
_model_server_result.datetime_utc      '2024-12-12 13:50:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5oc4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    5OC4 
#
_exptl.entry_id    5OC4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5OC4 
_cell.length_a            83.94 
_cell.length_b            83.94 
_cell.length_c            56.5 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OC4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 123 n n 
C1 C2 GOL sing 124 n n 
C1 H11 GOL sing 125 n n 
C1 H12 GOL sing 126 n n 
O1 HO1 GOL sing 127 n n 
C2 O2 GOL sing 128 n n 
C2 C3 GOL sing 129 n n 
C2 H2 GOL sing 130 n n 
O2 HO2 GOL sing 131 n n 
C3 O3 GOL sing 132 n n 
C3 H31 GOL sing 133 n n 
C3 H32 GOL sing 134 n n 
O3 HO3 GOL sing 135 n n 
#
_atom_sites.entry_id                     5OC4 
_atom_sites.fract_transf_matrix[1][1]    0.011913 
_atom_sites.fract_transf_matrix[1][2]    0.006878 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013756 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017699 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 501 1 CL CL . 
C 3 GOL A 1 502 1 GOL GOL . 
D 3 GOL A 1 503 2 GOL GOL . 
E 4 CAC A 1 504 1 CAC CAC . 
F 5 HOH A 1 601 48 HOH HOH . 
F 5 HOH A 2 602 77 HOH HOH . 
F 5 HOH A 3 603 4 HOH HOH . 
F 5 HOH A 4 604 96 HOH HOH . 
F 5 HOH A 5 605 6 HOH HOH . 
F 5 HOH A 6 606 36 HOH HOH . 
F 5 HOH A 7 607 229 HOH HOH . 
F 5 HOH A 8 608 23 HOH HOH . 
F 5 HOH A 9 609 17 HOH HOH . 
F 5 HOH A 10 610 166 HOH HOH . 
F 5 HOH A 11 611 19 HOH HOH . 
F 5 HOH A 12 612 12 HOH HOH . 
F 5 HOH A 13 613 15 HOH HOH . 
F 5 HOH A 14 614 198 HOH HOH . 
F 5 HOH A 15 615 25 HOH HOH . 
F 5 HOH A 16 616 13 HOH HOH . 
F 5 HOH A 17 617 44 HOH HOH . 
F 5 HOH A 18 618 54 HOH HOH . 
F 5 HOH A 19 619 16 HOH HOH . 
F 5 HOH A 20 620 38 HOH HOH . 
F 5 HOH A 21 621 112 HOH HOH . 
F 5 HOH A 22 622 20 HOH HOH . 
F 5 HOH A 23 623 39 HOH HOH . 
F 5 HOH A 24 624 41 HOH HOH . 
F 5 HOH A 25 625 167 HOH HOH . 
F 5 HOH A 26 626 51 HOH HOH . 
F 5 HOH A 27 627 88 HOH HOH . 
F 5 HOH A 28 628 24 HOH HOH . 
F 5 HOH A 29 629 164 HOH HOH . 
F 5 HOH A 30 630 79 HOH HOH . 
F 5 HOH A 31 631 177 HOH HOH . 
F 5 HOH A 32 632 49 HOH HOH . 
F 5 HOH A 33 633 78 HOH HOH . 
F 5 HOH A 34 634 188 HOH HOH . 
F 5 HOH A 35 635 42 HOH HOH . 
F 5 HOH A 36 636 131 HOH HOH . 
F 5 HOH A 37 637 14 HOH HOH . 
F 5 HOH A 38 638 1 HOH HOH . 
F 5 HOH A 39 639 60 HOH HOH . 
F 5 HOH A 40 640 3 HOH HOH . 
F 5 HOH A 41 641 178 HOH HOH . 
F 5 HOH A 42 642 66 HOH HOH . 
F 5 HOH A 43 643 90 HOH HOH . 
F 5 HOH A 44 644 2 HOH HOH . 
F 5 HOH A 45 645 155 HOH HOH . 
F 5 HOH A 46 646 98 HOH HOH . 
F 5 HOH A 47 647 7 HOH HOH . 
F 5 HOH A 48 648 32 HOH HOH . 
F 5 HOH A 49 649 211 HOH HOH . 
F 5 HOH A 50 650 10 HOH HOH . 
F 5 HOH A 51 651 161 HOH HOH . 
F 5 HOH A 52 652 63 HOH HOH . 
F 5 HOH A 53 653 18 HOH HOH . 
F 5 HOH A 54 654 184 HOH HOH . 
F 5 HOH A 55 655 27 HOH HOH . 
F 5 HOH A 56 656 218 HOH HOH . 
F 5 HOH A 57 657 108 HOH HOH . 
F 5 HOH A 58 658 29 HOH HOH . 
F 5 HOH A 59 659 181 HOH HOH . 
F 5 HOH A 60 660 97 HOH HOH . 
F 5 HOH A 61 661 120 HOH HOH . 
F 5 HOH A 62 662 225 HOH HOH . 
F 5 HOH A 63 663 55 HOH HOH . 
F 5 HOH A 64 664 28 HOH HOH . 
F 5 HOH A 65 665 33 HOH HOH . 
F 5 HOH A 66 666 204 HOH HOH . 
F 5 HOH A 67 667 31 HOH HOH . 
F 5 HOH A 68 668 5 HOH HOH . 
F 5 HOH A 69 669 157 HOH HOH . 
F 5 HOH A 70 670 22 HOH HOH . 
F 5 HOH A 71 671 228 HOH HOH . 
F 5 HOH A 72 672 226 HOH HOH . 
F 5 HOH A 73 673 35 HOH HOH . 
F 5 HOH A 74 674 11 HOH HOH . 
F 5 HOH A 75 675 195 HOH HOH . 
F 5 HOH A 76 676 103 HOH HOH . 
F 5 HOH A 77 677 165 HOH HOH . 
F 5 HOH A 78 678 171 HOH HOH . 
F 5 HOH A 79 679 94 HOH HOH . 
F 5 HOH A 80 680 21 HOH HOH . 
F 5 HOH A 81 681 185 HOH HOH . 
F 5 HOH A 82 682 180 HOH HOH . 
F 5 HOH A 83 683 193 HOH HOH . 
F 5 HOH A 84 684 179 HOH HOH . 
F 5 HOH A 85 685 59 HOH HOH . 
F 5 HOH A 86 686 159 HOH HOH . 
F 5 HOH A 87 687 224 HOH HOH . 
F 5 HOH A 88 688 227 HOH HOH . 
F 5 HOH A 89 689 200 HOH HOH . 
F 5 HOH A 90 690 191 HOH HOH . 
F 5 HOH A 91 691 92 HOH HOH . 
F 5 HOH A 92 692 168 HOH HOH . 
F 5 HOH A 93 693 194 HOH HOH . 
F 5 HOH A 94 694 183 HOH HOH . 
F 5 HOH A 95 695 67 HOH HOH . 
F 5 HOH A 96 696 163 HOH HOH . 
F 5 HOH A 97 697 217 HOH HOH . 
F 5 HOH A 98 698 132 HOH HOH . 
F 5 HOH A 99 699 153 HOH HOH . 
F 5 HOH A 100 700 203 HOH HOH . 
F 5 HOH A 101 701 214 HOH HOH . 
F 5 HOH A 102 702 206 HOH HOH . 
F 5 HOH A 103 703 182 HOH HOH . 
F 5 HOH A 104 704 99 HOH HOH . 
F 5 HOH A 105 705 118 HOH HOH . 
F 5 HOH A 106 706 64 HOH HOH . 
F 5 HOH A 107 707 65 HOH HOH . 
F 5 HOH A 108 708 71 HOH HOH . 
F 5 HOH A 109 709 170 HOH HOH . 
F 5 HOH A 110 710 207 HOH HOH . 
F 5 HOH A 111 711 111 HOH HOH . 
F 5 HOH A 112 712 209 HOH HOH . 
F 5 HOH A 113 713 173 HOH HOH . 
F 5 HOH A 114 714 202 HOH HOH . 
F 5 HOH A 115 715 68 HOH HOH . 
F 5 HOH A 116 716 26 HOH HOH . 
F 5 HOH A 117 717 223 HOH HOH . 
F 5 HOH A 118 718 201 HOH HOH . 
F 5 HOH A 119 719 95 HOH HOH . 
F 5 HOH A 120 720 47 HOH HOH . 
F 5 HOH A 121 721 142 HOH HOH . 
F 5 HOH A 122 722 176 HOH HOH . 
F 5 HOH A 123 723 43 HOH HOH . 
F 5 HOH A 124 724 172 HOH HOH . 
F 5 HOH A 125 725 162 HOH HOH . 
F 5 HOH A 126 726 216 HOH HOH . 
F 5 HOH A 127 727 205 HOH HOH . 
F 5 HOH A 128 728 212 HOH HOH . 
F 5 HOH A 129 729 222 HOH HOH . 
F 5 HOH A 130 730 34 HOH HOH . 
F 5 HOH A 131 731 143 HOH HOH . 
F 5 HOH A 132 732 221 HOH HOH . 
F 5 HOH A 133 733 215 HOH HOH . 
F 5 HOH A 134 734 160 HOH HOH . 
F 5 HOH A 135 735 169 HOH HOH . 
F 5 HOH A 136 736 187 HOH HOH . 
F 5 HOH A 137 737 219 HOH HOH . 
F 5 HOH A 138 738 56 HOH HOH . 
F 5 HOH A 139 739 192 HOH HOH . 
F 5 HOH A 140 740 208 HOH HOH . 
F 5 HOH A 141 741 190 HOH HOH . 
F 5 HOH A 142 742 210 HOH HOH . 
F 5 HOH A 143 743 186 HOH HOH . 
F 5 HOH A 144 744 220 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . A . D 3 10.34 25.08 9.713 0.5 35.38 ? C1 GOL 503 A 1 
HETATM 2 C C1 GOL . B . D 3 10.338 25.052 9.673 0.5 38.65 ? C1 GOL 503 A 1 
HETATM 3 O O1 GOL . A . D 3 9.968 24.655 8.406 0.5 28.99 ? O1 GOL 503 A 1 
HETATM 4 O O1 GOL . B . D 3 9.433 25.121 10.779 0.5 32.46 ? O1 GOL 503 A 1 
HETATM 5 C C2 GOL . A . D 3 11.606 25.884 9.52 0.5 36.26 ? C2 GOL 503 A 1 
HETATM 6 C C2 GOL . B . D 3 11.442 26.061 9.913 0.5 39.9 ? C2 GOL 503 A 1 
HETATM 7 O O2 GOL . A . D 3 11.295 27.243 9.349 0.5 39.16 ? O2 GOL 503 A 1 
HETATM 8 O O2 GOL . B . D 3 11.679 26.823 8.756 0.5 43.41 ? O2 GOL 503 A 1 
HETATM 9 C C3 GOL . A . D 3 12.66 25.642 10.568 0.5 31.71 ? C3 GOL 503 A 1 
HETATM 10 C C3 GOL . B . D 3 12.68 25.633 10.681 0.5 36.21 ? C3 GOL 503 A 1 
HETATM 11 O O3 GOL . A . D 3 13.58 24.703 10.131 0.5 28.58 ? O3 GOL 503 A 1 
HETATM 12 O O3 GOL . B . D 3 13.51 24.711 10.058 0.5 33.77 ? O3 GOL 503 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           249 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           12 
#