data_5OC8
#
_model_server_result.job_id            6Z3xFZIObOJvlcpbt2XXYA 
_model_server_result.datetime_utc      '2024-11-24 02:17:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5oc8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    5OC8 
#
_exptl.entry_id    5OC8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              555.413 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4~{S})-5-(5-chloranyl-1-methyl-2-oxidanylidene-pyridin-3-yl)-4-(4-chlorophenyl)-2-(2,4-dimethoxypyrimidin-5-yl)-3-propan-2-yl-4~{H}-pyrrolo[3,4-d]imidazol-6-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5OC8 
_cell.length_a            56.406 
_cell.length_b            56.406 
_cell.length_c            104.913 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OC8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C26 H24 Cl2 N6 O4' 
_chem_comp.formula_weight    555.413 
_chem_comp.id                9QW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4~{S})-5-(5-chloranyl-1-methyl-2-oxidanylidene-pyridin-3-yl)-4-(4-chlorophenyl)-2-(2,4-dimethoxypyrimidin-5-yl)-3-propan-2-yl-4~{H}-pyrrolo[3,4-d]imidazol-6-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL3 C24 9QW sing 1 n n 
O15 C10 9QW doub 2 n n 
C24 C25 9QW sing 3 n n 
C24 C23 9QW doub 4 n n 
C25 C14 9QW doub 5 n n 
C23 N22 9QW sing 6 n n 
C10 N11 9QW sing 7 n n 
C10 C1 9QW sing 8 n n 
C14 N11 9QW sing 9 n n 
C14 C21 9QW sing 10 n n 
N22 C21 9QW sing 11 n n 
N22 C35 9QW sing 12 n n 
N11 C12 9QW sing 13 n n 
C21 O36 9QW doub 14 n n 
C1 N5 9QW sing 15 n y 
C1 C2 9QW doub 16 n y 
N5 C4 9QW doub 17 n y 
C20 C19 9QW doub 18 n y 
C20 C13 9QW sing 19 n y 
C19 C18 9QW sing 20 n y 
C4 C9 9QW sing 21 n n 
C4 N3 9QW sing 22 n y 
C2 C12 9QW sing 23 n n 
C2 N3 9QW sing 24 n y 
O32 C33 9QW sing 25 n n 
O32 C31 9QW sing 26 n n 
C12 C13 9QW sing 27 n n 
C13 C16 9QW doub 28 n y 
C9 C31 9QW doub 29 n y 
C9 C27 9QW sing 30 n y 
C31 N30 9QW sing 31 n y 
C18 CL2 9QW sing 32 n n 
C18 C17 9QW doub 33 n y 
N3 C6 9QW sing 34 n n 
C27 N28 9QW doub 35 n y 
N30 C29 9QW doub 36 n y 
N28 C29 9QW sing 37 n y 
C29 O34 9QW sing 38 n n 
C16 C17 9QW sing 39 n y 
O34 C38 9QW sing 40 n n 
C8 C6 9QW sing 41 n n 
C6 C7 9QW sing 42 n n 
C12 H1 9QW sing 43 n n 
C16 H2 9QW sing 44 n n 
C17 H3 9QW sing 45 n n 
C19 H4 9QW sing 46 n n 
C20 H5 9QW sing 47 n n 
C23 H6 9QW sing 48 n n 
C25 H7 9QW sing 49 n n 
C27 H8 9QW sing 50 n n 
C6 H9 9QW sing 51 n n 
C7 H10 9QW sing 52 n n 
C7 H11 9QW sing 53 n n 
C7 H12 9QW sing 54 n n 
C8 H13 9QW sing 55 n n 
C8 H14 9QW sing 56 n n 
C8 H15 9QW sing 57 n n 
C33 H16 9QW sing 58 n n 
C33 H17 9QW sing 59 n n 
C33 H18 9QW sing 60 n n 
C35 H19 9QW sing 61 n n 
C35 H20 9QW sing 62 n n 
C35 H21 9QW sing 63 n n 
C38 H22 9QW sing 64 n n 
C38 H23 9QW sing 65 n n 
C38 H24 9QW sing 66 n n 
#
_atom_sites.entry_id                     5OC8 
_atom_sites.fract_transf_matrix[1][1]    0.017729 
_atom_sites.fract_transf_matrix[1][2]    0.010236 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020471 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009532 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 9QW A 1 201 1 9QW LI1 . 
C 3 CL A 1 202 1 CL CL . 
D 4 HOH A 1 301 38 HOH HOH . 
D 4 HOH A 2 302 23 HOH HOH . 
D 4 HOH A 3 303 45 HOH HOH . 
D 4 HOH A 4 304 14 HOH HOH . 
D 4 HOH A 5 305 54 HOH HOH . 
D 4 HOH A 6 306 72 HOH HOH . 
D 4 HOH A 7 307 12 HOH HOH . 
D 4 HOH A 8 308 75 HOH HOH . 
D 4 HOH A 9 309 65 HOH HOH . 
D 4 HOH A 10 310 73 HOH HOH . 
D 4 HOH A 11 311 43 HOH HOH . 
D 4 HOH A 12 312 53 HOH HOH . 
D 4 HOH A 13 313 49 HOH HOH . 
D 4 HOH A 14 314 22 HOH HOH . 
D 4 HOH A 15 315 34 HOH HOH . 
D 4 HOH A 16 316 76 HOH HOH . 
D 4 HOH A 17 317 16 HOH HOH . 
D 4 HOH A 18 318 9 HOH HOH . 
D 4 HOH A 19 319 25 HOH HOH . 
D 4 HOH A 20 320 11 HOH HOH . 
D 4 HOH A 21 321 19 HOH HOH . 
D 4 HOH A 22 322 13 HOH HOH . 
D 4 HOH A 23 323 40 HOH HOH . 
D 4 HOH A 24 324 4 HOH HOH . 
D 4 HOH A 25 325 2 HOH HOH . 
D 4 HOH A 26 326 8 HOH HOH . 
D 4 HOH A 27 327 5 HOH HOH . 
D 4 HOH A 28 328 80 HOH HOH . 
D 4 HOH A 29 329 7 HOH HOH . 
D 4 HOH A 30 330 1 HOH HOH . 
D 4 HOH A 31 331 51 HOH HOH . 
D 4 HOH A 32 332 31 HOH HOH . 
D 4 HOH A 33 333 32 HOH HOH . 
D 4 HOH A 34 334 6 HOH HOH . 
D 4 HOH A 35 335 3 HOH HOH . 
D 4 HOH A 36 336 26 HOH HOH . 
D 4 HOH A 37 337 47 HOH HOH . 
D 4 HOH A 38 338 18 HOH HOH . 
D 4 HOH A 39 339 63 HOH HOH . 
D 4 HOH A 40 340 68 HOH HOH . 
D 4 HOH A 41 341 20 HOH HOH . 
D 4 HOH A 42 342 35 HOH HOH . 
D 4 HOH A 43 343 17 HOH HOH . 
D 4 HOH A 44 344 10 HOH HOH . 
D 4 HOH A 45 345 36 HOH HOH . 
D 4 HOH A 46 346 28 HOH HOH . 
D 4 HOH A 47 347 61 HOH HOH . 
D 4 HOH A 48 348 50 HOH HOH . 
D 4 HOH A 49 349 39 HOH HOH . 
D 4 HOH A 50 350 57 HOH HOH . 
D 4 HOH A 51 351 79 HOH HOH . 
D 4 HOH A 52 352 71 HOH HOH . 
D 4 HOH A 53 353 15 HOH HOH . 
D 4 HOH A 54 354 77 HOH HOH . 
D 4 HOH A 55 355 83 HOH HOH . 
D 4 HOH A 56 356 69 HOH HOH . 
D 4 HOH A 57 357 70 HOH HOH . 
D 4 HOH A 58 358 21 HOH HOH . 
D 4 HOH A 59 359 59 HOH HOH . 
D 4 HOH A 60 360 82 HOH HOH . 
D 4 HOH A 61 361 24 HOH HOH . 
D 4 HOH A 62 362 41 HOH HOH . 
D 4 HOH A 63 363 46 HOH HOH . 
D 4 HOH A 64 364 27 HOH HOH . 
D 4 HOH A 65 365 42 HOH HOH . 
D 4 HOH A 66 366 62 HOH HOH . 
D 4 HOH A 67 367 78 HOH HOH . 
D 4 HOH A 68 368 58 HOH HOH . 
D 4 HOH A 69 369 55 HOH HOH . 
D 4 HOH A 70 370 33 HOH HOH . 
D 4 HOH A 71 371 81 HOH HOH . 
D 4 HOH A 72 372 52 HOH HOH . 
D 4 HOH A 73 373 60 HOH HOH . 
D 4 HOH A 74 374 67 HOH HOH . 
D 4 HOH A 75 375 74 HOH HOH . 
D 4 HOH A 76 376 48 HOH HOH . 
D 4 HOH A 77 377 64 HOH HOH . 
D 4 HOH A 78 378 30 HOH HOH . 
D 4 HOH A 79 379 66 HOH HOH . 
D 4 HOH A 80 380 56 HOH HOH . 
D 4 HOH A 81 381 44 HOH HOH . 
D 4 HOH A 82 382 37 HOH HOH . 
D 4 HOH A 83 383 29 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 9QW . . . B 2 -9.66 10.557 -0.721 1 19.58 ? C1 9QW 201 A 1 
HETATM 2 C C2 9QW . . . B 2 -9.296 11.116 0.443 1 18.72 ? C2 9QW 201 A 1 
HETATM 3 C C12 9QW . . . B 2 -7.787 11.079 0.535 1 18.27 ? C12 9QW 201 A 1 
HETATM 4 C C13 9QW . . . B 2 -7.027 12.412 0.716 1 16.26 ? C13 9QW 201 A 1 
HETATM 5 C C14 9QW . . . B 2 -6.165 10.213 -1.169 1 23.17 ? C14 9QW 201 A 1 
HETATM 6 C C16 9QW . . . B 2 -6.069 12.532 1.746 1 15.73 ? C16 9QW 201 A 1 
HETATM 7 C C17 9QW . . . B 2 -5.351 13.731 1.891 1 15.07 ? C17 9QW 201 A 1 
HETATM 8 C C18 9QW . . . B 2 -5.593 14.774 0.983 1 14.25 ? C18 9QW 201 A 1 
HETATM 9 C C19 9QW . . . B 2 -6.54 14.658 -0.04 1 15.71 ? C19 9QW 201 A 1 
HETATM 10 C C20 9QW . . . B 2 -7.261 13.466 -0.176 1 15.03 ? C20 9QW 201 A 1 
HETATM 11 C C21 9QW . . . B 2 -5.609 8.887 -0.766 1 26.41 ? C21 9QW 201 A 1 
HETATM 12 C C23 9QW . . . B 2 -3.557 9.344 -1.846 1 25.14 ? C23 9QW 201 A 1 
HETATM 13 C C24 9QW . . . B 2 -4.017 10.543 -2.235 1 22.29 ? C24 9QW 201 A 1 
HETATM 14 C C25 9QW . . . B 2 -5.367 10.997 -1.901 1 22.97 ? C25 9QW 201 A 1 
HETATM 15 C C27 9QW . . . B 2 -13.585 10.176 1.15 1 24.07 ? C27 9QW 201 A 1 
HETATM 16 C C29 9QW . . . B 2 -15.476 11.5 1.566 1 25.92 ? C29 9QW 201 A 1 
HETATM 17 N N3 9QW . . . B 2 -10.368 11.45 1.144 1 19.39 ? N3 9QW 201 A 1 
HETATM 18 C C4 9QW . . . B 2 -11.412 11.135 0.406 1 21.19 ? C4 9QW 201 A 1 
HETATM 19 N N5 9QW . . . B 2 -11.085 10.599 -0.698 1 19.22 ? N5 9QW 201 A 1 
HETATM 20 C C6 9QW . . . B 2 -10.422 12.089 2.481 1 19.57 ? C6 9QW 201 A 1 
HETATM 21 C C7 9QW . . . B 2 -9.593 11.36 3.558 1 19.53 ? C7 9QW 201 A 1 
HETATM 22 C C8 9QW . . . B 2 -10.044 13.605 2.469 1 17.26 ? C8 9QW 201 A 1 
HETATM 23 C C9 9QW . . . B 2 -12.854 11.308 0.789 1 21.55 ? C9 9QW 201 A 1 
HETATM 24 C C10 9QW . . . B 2 -8.524 10.142 -1.518 1 20.45 ? C10 9QW 201 A 1 
HETATM 25 N N11 9QW . . . B 2 -7.444 10.49 -0.793 1 21.5 ? N11 9QW 201 A 1 
HETATM 26 O O15 9QW . . . B 2 -8.597 9.623 -2.627 1 21.26 ? O15 9QW 201 A 1 
HETATM 27 N N22 9QW . . . B 2 -4.348 8.511 -1.126 1 26.89 ? N22 9QW 201 A 1 
HETATM 28 CL CL2 9QW . . . B 2 -4.713 16.271 1.117 1 16.19 ? CL2 9QW 201 A 1 
HETATM 29 N N28 9QW . . . B 2 -14.872 10.296 1.521 1 25.37 ? N28 9QW 201 A 1 
HETATM 30 N N30 9QW . . . B 2 -14.787 12.618 1.239 1 23.71 ? N30 9QW 201 A 1 
HETATM 31 C C31 9QW . . . B 2 -13.487 12.548 0.854 1 22.57 ? C31 9QW 201 A 1 
HETATM 32 O O32 9QW . . . B 2 -12.759 13.676 0.518 1 21.68 ? O32 9QW 201 A 1 
HETATM 33 C C33 9QW . . . B 2 -13.393 14.955 0.666 1 21.9 ? C33 9QW 201 A 1 
HETATM 34 O O34 9QW . . . B 2 -16.816 11.564 1.945 1 26.64 ? O34 9QW 201 A 1 
HETATM 35 C C35 9QW . . . B 2 -3.829 7.194 -0.709 1 28.57 ? C35 9QW 201 A 1 
HETATM 36 O O36 9QW . . . B 2 -6.324 8.133 -0.116 1 27.89 ? O36 9QW 201 A 1 
HETATM 37 CL CL3 9QW . . . B 2 -3.008 11.613 -3.15 1 21.88 ? CL3 9QW 201 A 1 
HETATM 38 C C38 9QW . . . B 2 -17.384 12.841 2.25 1 26.68 ? C38 9QW 201 A 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           38 
#