data_5OC9
#
_model_server_result.job_id            vQbpTny-z9F97zSCLmoUCQ 
_model_server_result.datetime_utc      '2024-10-28 02:32:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5oc9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":701}' 
#
_entry.id    5OC9 
#
_exptl.entry_id    5OC9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5OC9 
_cell.length_a            59.15 
_cell.length_b            153.59 
_cell.length_c            218.78 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OC9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 259 A GLU 259 1_555 E CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc2 A OD1 ASN 444 A ASN 444 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc3 A OE1 GLN 445 A GLN 445 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.825 ? 
metalc ? metalc4 A OE1 GLU 448 A GLU 448 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? 
metalc ? metalc5 A OE2 GLU 448 A GLU 448 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc6 A OD1 ASP 497 A ASP 497 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? 
metalc ? metalc7 A OE1 GLU 500 A GLU 500 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.192 ? 
metalc ? metalc8 A OE2 GLU 500 A GLU 500 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc9 A OE1 GLU 500 A GLU 500 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.028 ? 
metalc ? metalc10 A OE1 GLU 529 A GLU 529 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc11 A OE2 GLU 529 A GLU 529 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.763 ? 
metalc ? metalc12 A OE2 GLU 529 A GLU 529 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? 
metalc ? metalc13 A OD1 ASP 533 A ASP 533 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? 
metalc ? metalc14 A OD2 ASP 533 A ASP 533 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? 
metalc ? metalc15 A O ALA 610 A ALA 610 1_555 E CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
metalc ? metalc16 A O ILE 613 A ILE 613 1_555 E CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? 
metalc ? metalc17 A OD1 ASP 615 A ASP 615 1_555 E CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc18 B OE1 GLU 259 B GLU 259 1_555 Q CA CA . B CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
metalc ? metalc19 B OD1 ASN 444 B ASN 444 1_555 O CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? 
metalc ? metalc20 B OE1 GLN 445 B GLN 445 1_555 O CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
metalc ? metalc21 B OE1 GLU 448 B GLU 448 1_555 O CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? 
metalc ? metalc22 B OE2 GLU 448 B GLU 448 1_555 P CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? 
metalc ? metalc23 B OD1 ASP 497 B ASP 497 1_555 P CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.915 ? 
metalc ? metalc24 B OE2 GLU 500 B GLU 500 1_555 O CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? 
metalc ? metalc25 B OE1 GLU 500 B GLU 500 1_555 P CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.082 ? 
metalc ? metalc26 B OE1 GLU 529 B GLU 529 1_555 O CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc27 B OE2 GLU 529 B GLU 529 1_555 O CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? 
metalc ? metalc28 B OE2 GLU 529 B GLU 529 1_555 P CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc29 B OD1 ASP 533 B ASP 533 1_555 P CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.792 ? 
metalc ? metalc30 B OD2 ASP 533 B ASP 533 1_555 P CA CA . B CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? 
metalc ? metalc31 B O ALA 610 B ALA 610 1_555 Q CA CA . B CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? 
metalc ? metalc32 B O ILE 613 B ILE 613 1_555 Q CA CA . B CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? 
metalc ? metalc33 B OD1 ASP 615 B ASP 615 1_555 Q CA CA . B CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc34 O CA CA . B CA 701 1_555 CA O HOH . B HOH 821 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? 
metalc ? metalc35 Q CA CA . B CA 703 1_555 CA O HOH . B HOH 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5OC9 
_atom_sites.fract_transf_matrix[1][1]    0.016906 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006511 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004571 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CA A 1 701 800 CA CA . 
D 2 CA A 1 702 801 CA CA . 
E 2 CA A 1 703 802 CA CA . 
F 3 79M A 1 704 850 79M 79M . 
G 3 79M A 1 705 851 79M 79M . 
H 3 79M A 1 706 852 79M 79M . 
I 3 79M A 1 707 853 79M 79M . 
J 3 79M A 1 708 854 79M 79M . 
K 3 79M A 1 709 855 79M 79M . 
L 3 79M A 1 710 856 79M 79M . 
M 3 79M A 1 711 857 79M 79M . 
N 3 79M A 1 712 858 79M 79M . 
O 2 CA B 1 701 800 CA CA . 
P 2 CA B 1 702 801 CA CA . 
Q 2 CA B 1 703 802 CA CA . 
R 2 CA B 1 704 803 CA CA . 
S 3 79M B 1 705 850 79M 79M . 
T 3 79M B 1 706 851 79M 79M . 
U 3 79M B 1 707 852 79M 79M . 
V 3 79M B 1 708 853 79M 79M . 
W 3 79M B 1 709 854 79M 79M . 
X 3 79M B 1 710 855 79M 79M . 
Y 3 79M B 1 711 856 79M 79M . 
Z 3 79M B 1 712 857 79M 79M . 
AA 3 79M B 1 713 858 79M 79M . 
BA 4 HOH A 1 801 1 HOH HOH . 
BA 4 HOH A 2 802 37 HOH HOH . 
BA 4 HOH A 3 803 51 HOH HOH . 
BA 4 HOH A 4 804 52 HOH HOH . 
BA 4 HOH A 5 805 33 HOH HOH . 
BA 4 HOH A 6 806 39 HOH HOH . 
BA 4 HOH A 7 807 19 HOH HOH . 
BA 4 HOH A 8 808 56 HOH HOH . 
BA 4 HOH A 9 809 53 HOH HOH . 
BA 4 HOH A 10 810 50 HOH HOH . 
BA 4 HOH A 11 811 49 HOH HOH . 
BA 4 HOH A 12 812 54 HOH HOH . 
BA 4 HOH A 13 813 43 HOH HOH . 
BA 4 HOH A 14 814 28 HOH HOH . 
BA 4 HOH A 15 815 48 HOH HOH . 
BA 4 HOH A 16 816 10 HOH HOH . 
BA 4 HOH A 17 817 57 HOH HOH . 
BA 4 HOH A 18 818 25 HOH HOH . 
BA 4 HOH A 19 819 2 HOH HOH . 
BA 4 HOH A 20 820 47 HOH HOH . 
BA 4 HOH A 21 821 29 HOH HOH . 
BA 4 HOH A 22 822 22 HOH HOH . 
CA 4 HOH B 1 801 13 HOH HOH . 
CA 4 HOH B 2 802 34 HOH HOH . 
CA 4 HOH B 3 803 6 HOH HOH . 
CA 4 HOH B 4 804 55 HOH HOH . 
CA 4 HOH B 5 805 59 HOH HOH . 
CA 4 HOH B 6 806 23 HOH HOH . 
CA 4 HOH B 7 807 11 HOH HOH . 
CA 4 HOH B 8 808 38 HOH HOH . 
CA 4 HOH B 9 809 58 HOH HOH . 
CA 4 HOH B 10 810 35 HOH HOH . 
CA 4 HOH B 11 811 5 HOH HOH . 
CA 4 HOH B 12 812 7 HOH HOH . 
CA 4 HOH B 13 813 3 HOH HOH . 
CA 4 HOH B 14 814 40 HOH HOH . 
CA 4 HOH B 15 815 46 HOH HOH . 
CA 4 HOH B 16 816 18 HOH HOH . 
CA 4 HOH B 17 817 62 HOH HOH . 
CA 4 HOH B 18 818 24 HOH HOH . 
CA 4 HOH B 19 819 63 HOH HOH . 
CA 4 HOH B 20 820 32 HOH HOH . 
CA 4 HOH B 21 821 36 HOH HOH . 
CA 4 HOH B 22 822 60 HOH HOH . 
CA 4 HOH B 23 823 61 HOH HOH . 
CA 4 HOH B 24 824 26 HOH HOH . 
CA 4 HOH B 25 825 8 HOH HOH . 
CA 4 HOH B 26 826 41 HOH HOH . 
CA 4 HOH B 27 827 20 HOH HOH . 
CA 4 HOH B 28 828 42 HOH HOH . 
CA 4 HOH B 29 829 4 HOH HOH . 
CA 4 HOH B 30 830 31 HOH HOH . 
CA 4 HOH B 31 831 9 HOH HOH . 
CA 4 HOH B 32 832 17 HOH HOH . 
CA 4 HOH B 33 833 16 HOH HOH . 
CA 4 HOH B 34 834 45 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         O 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               64.47 
_atom_site.Cartn_y               101.895 
_atom_site.Cartn_z               100.837 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        46.85 
_atom_site.pdbx_formal_charge    2 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           701 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              28 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           339 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#