data_5OCW
#
_model_server_result.job_id            P7mpPJn--ZOPES7809SbTA 
_model_server_result.datetime_utc      '2024-12-21 11:36:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ocw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"EA","auth_seq_id":501}' 
#
_entry.id    5OCW 
#
_exptl.entry_id    5OCW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              318.22 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5OCW 
_cell.length_a            426.05 
_cell.length_b            432.11 
_cell.length_c            434.03 
_cell.Z_PDB               192 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OCW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        22 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'F 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
? tetrameric 4 author_defined_assembly 2 
? tetrameric 4 author_defined_assembly 3 
? tetrameric 4 author_defined_assembly 4 
? tetrameric 4 author_defined_assembly 5 
? tetrameric 4 author_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,Y,Z 1 1 
E,F,G,H,AA,BA 2 1 
I,J,K,L,CA,DA 3 1 
M,N,O,P,EA,FA 4 1 
Q,R,S,T,GA,HA 5 1 
U,V,W,X,IA,JA 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
? 3 BA N N 
? 3 CA N N 
? 3 DA N N 
? 3 EA N N 
? 3 FA N N 
? 3 GA N N 
? 3 HA N N 
? 3 IA N N 
? 3 JA N N 
#
_chem_comp.formula           'C11 H15 N2 O7 P' 
_chem_comp.formula_weight    318.22 
_chem_comp.id                P1T 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OP1 P P1T sing 235 n n 
OP1 HOP1 P1T sing 236 n n 
P OP2 P1T doub 237 n n 
P OP4 P1T sing 238 n n 
P OP3 P1T sing 239 n n 
OP3 HOP3 P1T sing 240 n n 
OP4 C5A P1T sing 241 n n 
C5A C5 P1T sing 242 n n 
C5A H5A1 P1T sing 243 n n 
C5A H5A2 P1T sing 244 n n 
C5 C4 P1T sing 245 n y 
C5 C6 P1T doub 246 n y 
C6 N1 P1T sing 247 n y 
C6 H6 P1T sing 248 n n 
N1 C2 P1T doub 249 n y 
C2 C3 P1T sing 250 n y 
C2 C2A P1T sing 251 n n 
C2A H2A1 P1T sing 252 n n 
C2A H2A2 P1T sing 253 n n 
C2A H2A3 P1T sing 254 n n 
C3 O3A P1T sing 255 n n 
C3 C4 P1T doub 256 n y 
O3A HO3A P1T sing 257 n n 
C4 C4A P1T sing 258 n n 
C4A N P1T sing 259 n n 
C4A H4A1 P1T sing 260 n n 
C4A H4A2 P1T sing 261 n n 
N CA P1T sing 262 n n 
N HN P1T sing 263 n n 
CA C P1T sing 264 n n 
CA CB P1T doub 265 n n 
CB HB1 P1T sing 266 n n 
CB HB2 P1T sing 267 n n 
C OXT P1T doub 268 n n 
C O P1T sing 269 n n 
O HO P1T sing 270 n n 
#
_atom_sites.entry_id                     5OCW 
_atom_sites.fract_transf_matrix[1][1]    0.002347 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.002314 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002304 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
Y 3 P1T B 1 501 501 P1T P1T . 
Z 3 P1T D 1 501 501 P1T P1T . 
AA 3 P1T F 1 501 501 P1T P1T . 
BA 3 P1T H 1 501 501 P1T P1T . 
CA 3 P1T J 1 501 501 P1T P1T . 
DA 3 P1T L 1 501 501 P1T P1T . 
EA 3 P1T N 1 501 501 P1T P1T . 
FA 3 P1T P 1 501 501 P1T P1T . 
GA 3 P1T R 1 501 501 P1T P1T . 
HA 3 P1T T 1 501 501 P1T P1T . 
IA 3 P1T V 1 501 501 P1T P1T . 
JA 3 P1T X 1 501 501 P1T P1T . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OP1 P1T . . . EA 3 42.894 -23.285 -137.053 1 175.08 ? OP1 P1T 501 N 1 
HETATM 2 P P P1T . . . EA 3 42.447 -22.181 -137.979 1 175.08 ? P P1T 501 N 1 
HETATM 3 O OP2 P1T . . . EA 3 41.941 -22.66 -139.312 1 175.08 ? OP2 P1T 501 N 1 
HETATM 4 O OP3 P1T . . . EA 3 43.417 -21.039 -138.103 1 175.08 ? OP3 P1T 501 N 1 
HETATM 5 O OP4 P1T . . . EA 3 41.177 -21.539 -137.243 1 175.08 ? OP4 P1T 501 N 1 
HETATM 6 C C5A P1T . . . EA 3 40.503 -20.392 -137.765 1 175.08 ? C5A P1T 501 N 1 
HETATM 7 C C5 P1T . . . EA 3 39.147 -20.764 -138.336 1 175.08 ? C5 P1T 501 N 1 
HETATM 8 C C6 P1T . . . EA 3 38.846 -20.531 -139.674 1 175.08 ? C6 P1T 501 N 1 
HETATM 9 N N1 P1T . . . EA 3 37.651 -20.838 -140.21 1 175.08 ? N1 P1T 501 N 1 
HETATM 10 C C2 P1T . . . EA 3 36.636 -21.4 -139.518 1 175.08 ? C2 P1T 501 N 1 
HETATM 11 C C2A P1T . . . EA 3 35.345 -21.712 -140.218 1 175.08 ? C2A P1T 501 N 1 
HETATM 12 C C3 P1T . . . EA 3 36.808 -21.701 -138.081 1 175.08 ? C3 P1T 501 N 1 
HETATM 13 O O3A P1T . . . EA 3 35.817 -22.265 -137.346 1 175.08 ? O3A P1T 501 N 1 
HETATM 14 C C4 P1T . . . EA 3 38.115 -21.374 -137.469 1 175.08 ? C4 P1T 501 N 1 
HETATM 15 C C4A P1T . . . EA 3 38.442 -21.614 -136.017 1 175.08 ? C4A P1T 501 N 1 
HETATM 16 N N P1T . . . EA 3 37.472 -22.399 -135.291 1 175.08 ? N P1T 501 N 1 
HETATM 17 C CA P1T . . . EA 3 37.615 -22.704 -134.004 1 175.08 ? CA P1T 501 N 1 
HETATM 18 C CB P1T . . . EA 3 38.578 -22.212 -133.227 1 175.08 ? CB P1T 501 N 1 
HETATM 19 C C P1T . . . EA 3 36.664 -23.676 -133.487 1 175.08 ? C P1T 501 N 1 
HETATM 20 O O P1T . . . EA 3 36.988 -24.384 -132.512 1 175.08 ? O P1T 501 N 1 
HETATM 21 O OXT P1T . . . EA 3 35.545 -23.787 -134.041 1 175.08 ? OXT P1T 501 N 1 
#
_model_server_stats.io_time_ms              469 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    96 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           21 
#