data_5OEH # _model_server_result.job_id 5Iz3q3zIJAvOLZEb1Mel0g _model_server_result.datetime_utc '2024-10-18 18:15:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oeh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5OEH # _exptl.entry_id 5OEH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 726.646 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1R,5S,9S,16R,20R,24S,28S,35R)-3,22-Bis(dihydroxyphosphoryloxy)tridecacyclo[22.14.1.15,20.19,16.128,35.02,23.04,21.06,19.08,17.010,15.025,38.027,36.029,34]dotetraconta-2(23),3,6,8(17),10,12,14,18,21,25,27(36),29,31,33,37-pentadecaene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OEH _cell.length_a 60.4 _cell.length_b 157.4 _cell.length_c 77.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OEH _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_456 -x-1,y,-z+1 -1 0 0 0 1 0 0 0 -1 -60.4 0 77.2 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C42 H32 O8 P2' _chem_comp.formula_weight 726.646 _chem_comp.id 9SZ _chem_comp.mon_nstd_flag . _chem_comp.name (1R,5S,9S,16R,20R,24S,28S,35R)-3,22-Bis(dihydroxyphosphoryloxy)tridecacyclo[22.14.1.15,20.19,16.128,35.02,23.04,21.06,19.08,17.010,15.025,38.027,36.029,34]dotetraconta-2(23),3,6,8(17),10,12,14,18,21,25,27(36),29,31,33,37-pentadecaene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAD PAB 9SZ doub 1 n n PAB OAC 9SZ sing 2 n n PAB OAA 9SZ sing 3 n n PAB OAE 9SZ sing 4 n n CAX CAW 9SZ doub 5 n y CAX CAY 9SZ sing 6 n y CAZ CBA 9SZ sing 7 n n CAZ CAW 9SZ sing 8 n n CAZ CBH 9SZ sing 9 n n CBA CBB 9SZ sing 10 n n CAQ CAY 9SZ sing 11 n n CAQ CAR 9SZ sing 12 n n CAQ CAP 9SZ sing 13 n n CAW CAV 9SZ sing 14 n y CAY CAT 9SZ doub 15 n y CAR CAS 9SZ sing 16 n n OAE CAF 9SZ sing 17 n n CBH CBG 9SZ doub 18 n y CBH CBC 9SZ sing 19 n y CBG CBF 9SZ sing 20 n y CAV CBB 9SZ sing 21 n n CAV CAU 9SZ doub 22 n y CAP CAF 9SZ doub 23 n y CAP CAO 9SZ sing 24 n y CAT CAS 9SZ sing 25 n n CAT CAU 9SZ sing 26 n y CBB CBC 9SZ sing 27 n n CAF CAG 9SZ sing 28 n y CAS CAO 9SZ sing 29 n n CBC CBD 9SZ doub 30 n y CAO CAI 9SZ doub 31 n y CBF CBE 9SZ doub 32 n y CAG CBK 9SZ sing 33 n n CAG CAH 9SZ doub 34 n y CBD CBE 9SZ sing 35 n y CBK CBL 9SZ sing 36 n n CBK CBJ 9SZ sing 37 n n CAI CAH 9SZ sing 38 n y CAI OAJ 9SZ sing 39 n n CAH CBI 9SZ sing 40 n n CBM CBL 9SZ doub 41 n y CBM CBN 9SZ sing 42 n y CBL CBQ 9SZ sing 43 n y CBJ CBI 9SZ sing 44 n n CBV CBW 9SZ doub 45 n y CBV CBU 9SZ sing 46 n y OAJ PAK 9SZ sing 47 n n CBW CBX 9SZ sing 48 n y CBI CBQ 9SZ sing 49 n n CBN CBT 9SZ sing 50 n n CBN CBO 9SZ doub 51 n y CBQ CBP 9SZ doub 52 n y CBU CBT 9SZ sing 53 n n CBU CBZ 9SZ doub 54 n y CBT CBS 9SZ sing 55 n n CBX CBY 9SZ doub 56 n y OAL PAK 9SZ doub 57 n n PAK OAM 9SZ sing 58 n n PAK OAN 9SZ sing 59 n n CBO CBP 9SZ sing 60 n y CBO CBR 9SZ sing 61 n n CBZ CBY 9SZ sing 62 n y CBZ CBR 9SZ sing 63 n n CBS CBR 9SZ sing 64 n n OAC H1 9SZ sing 65 n n OAA H2 9SZ sing 66 n n CBK H3 9SZ sing 67 n n CBJ H4 9SZ sing 68 n n CBJ H5 9SZ sing 69 n n CBM H6 9SZ sing 70 n n CBT H7 9SZ sing 71 n n CBS H8 9SZ sing 72 n n CBS H9 9SZ sing 73 n n CBV H10 9SZ sing 74 n n CBW H11 9SZ sing 75 n n CBX H12 9SZ sing 76 n n CBY H13 9SZ sing 77 n n CBR H14 9SZ sing 78 n n CBP H15 9SZ sing 79 n n CBI H16 9SZ sing 80 n n OAM H17 9SZ sing 81 n n OAN H18 9SZ sing 82 n n CAQ H19 9SZ sing 83 n n CAR H20 9SZ sing 84 n n CAR H21 9SZ sing 85 n n CAS H22 9SZ sing 86 n n CAX H23 9SZ sing 87 n n CAZ H24 9SZ sing 88 n n CBA H25 9SZ sing 89 n n CBA H26 9SZ sing 90 n n CBG H27 9SZ sing 91 n n CBF H28 9SZ sing 92 n n CBE H29 9SZ sing 93 n n CBD H30 9SZ sing 94 n n CBB H31 9SZ sing 95 n n CAU H32 9SZ sing 96 n n # _atom_sites.entry_id 5OEH _atom_sites.fract_transf_matrix[1][1] 0.016556 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006353 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012953 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9SZ A 1 301 1 9SZ DRG . C 3 CL A 1 302 1 CL CL . D 4 GOL A 1 303 1 GOL GOL . E 5 HOH A 1 401 65 HOH HOH . E 5 HOH A 2 402 55 HOH HOH . E 5 HOH A 3 403 30 HOH HOH . E 5 HOH A 4 404 24 HOH HOH . E 5 HOH A 5 405 19 HOH HOH . E 5 HOH A 6 406 3 HOH HOH . E 5 HOH A 7 407 12 HOH HOH . E 5 HOH A 8 408 43 HOH HOH . E 5 HOH A 9 409 49 HOH HOH . E 5 HOH A 10 410 41 HOH HOH . E 5 HOH A 11 411 82 HOH HOH . E 5 HOH A 12 412 58 HOH HOH . E 5 HOH A 13 413 13 HOH HOH . E 5 HOH A 14 414 39 HOH HOH . E 5 HOH A 15 415 46 HOH HOH . E 5 HOH A 16 416 88 HOH HOH . E 5 HOH A 17 417 56 HOH HOH . E 5 HOH A 18 418 18 HOH HOH . E 5 HOH A 19 419 51 HOH HOH . E 5 HOH A 20 420 34 HOH HOH . E 5 HOH A 21 421 29 HOH HOH . E 5 HOH A 22 422 23 HOH HOH . E 5 HOH A 23 423 78 HOH HOH . E 5 HOH A 24 424 31 HOH HOH . E 5 HOH A 25 425 21 HOH HOH . E 5 HOH A 26 426 4 HOH HOH . E 5 HOH A 27 427 45 HOH HOH . E 5 HOH A 28 428 52 HOH HOH . E 5 HOH A 29 429 28 HOH HOH . E 5 HOH A 30 430 50 HOH HOH . E 5 HOH A 31 431 5 HOH HOH . E 5 HOH A 32 432 87 HOH HOH . E 5 HOH A 33 433 93 HOH HOH . E 5 HOH A 34 434 8 HOH HOH . E 5 HOH A 35 435 7 HOH HOH . E 5 HOH A 36 436 48 HOH HOH . E 5 HOH A 37 437 97 HOH HOH . E 5 HOH A 38 438 9 HOH HOH . E 5 HOH A 39 439 44 HOH HOH . E 5 HOH A 40 440 26 HOH HOH . E 5 HOH A 41 441 92 HOH HOH . E 5 HOH A 42 442 76 HOH HOH . E 5 HOH A 43 443 99 HOH HOH . E 5 HOH A 44 444 42 HOH HOH . E 5 HOH A 45 445 98 HOH HOH . E 5 HOH A 46 446 86 HOH HOH . E 5 HOH A 47 447 32 HOH HOH . E 5 HOH A 48 448 6 HOH HOH . E 5 HOH A 49 449 10 HOH HOH . E 5 HOH A 50 450 57 HOH HOH . E 5 HOH A 51 451 14 HOH HOH . E 5 HOH A 52 452 67 HOH HOH . E 5 HOH A 53 453 11 HOH HOH . E 5 HOH A 54 454 96 HOH HOH . E 5 HOH A 55 455 89 HOH HOH . E 5 HOH A 56 456 16 HOH HOH . E 5 HOH A 57 457 40 HOH HOH . E 5 HOH A 58 458 20 HOH HOH . E 5 HOH A 59 459 66 HOH HOH . E 5 HOH A 60 460 27 HOH HOH . E 5 HOH A 61 461 15 HOH HOH . E 5 HOH A 62 462 53 HOH HOH . E 5 HOH A 63 463 80 HOH HOH . E 5 HOH A 64 464 25 HOH HOH . E 5 HOH A 65 465 74 HOH HOH . E 5 HOH A 66 466 69 HOH HOH . E 5 HOH A 67 467 35 HOH HOH . E 5 HOH A 68 468 77 HOH HOH . E 5 HOH A 69 469 22 HOH HOH . E 5 HOH A 70 470 54 HOH HOH . E 5 HOH A 71 471 73 HOH HOH . E 5 HOH A 72 472 47 HOH HOH . E 5 HOH A 73 473 70 HOH HOH . E 5 HOH A 74 474 84 HOH HOH . E 5 HOH A 75 475 1 HOH HOH . E 5 HOH A 76 476 2 HOH HOH . E 5 HOH A 77 477 71 HOH HOH . E 5 HOH A 78 478 72 HOH HOH . E 5 HOH A 79 479 79 HOH HOH . E 5 HOH A 80 480 36 HOH HOH . E 5 HOH A 81 481 94 HOH HOH . E 5 HOH A 82 482 37 HOH HOH . E 5 HOH A 83 483 83 HOH HOH . E 5 HOH A 84 484 63 HOH HOH . E 5 HOH A 85 485 64 HOH HOH . E 5 HOH A 86 486 90 HOH HOH . E 5 HOH A 87 487 95 HOH HOH . E 5 HOH A 88 488 75 HOH HOH . E 5 HOH A 89 489 38 HOH HOH . E 5 HOH A 90 490 91 HOH HOH . E 5 HOH A 91 491 62 HOH HOH . E 5 HOH A 92 492 81 HOH HOH . E 5 HOH A 93 493 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAC 9SZ . . . B 2 -37.904 -9.966 16.881 1 50.01 ? OAC 9SZ 301 A 1 HETATM 2 P PAB 9SZ . . . B 2 -38.656 -8.534 16.81 1 48.54 ? PAB 9SZ 301 A 1 HETATM 3 O OAD 9SZ . . . B 2 -38.551 -8.078 15.26 1 47.26 ? OAD 9SZ 301 A 1 HETATM 4 O OAA 9SZ . . . B 2 -40.066 -8.625 17.267 1 48.93 ? OAA 9SZ 301 A 1 HETATM 5 O OAE 9SZ . . . B 2 -37.764 -7.498 17.66 1 51.14 ? OAE 9SZ 301 A 1 HETATM 6 C CAF 9SZ . . . B 2 -38.338 -6.785 18.72 1 52.69 ? CAF 9SZ 301 A 1 HETATM 7 C CAG 9SZ . . . B 2 -38.333 -7.35 19.99 1 53.07 ? CAG 9SZ 301 A 1 HETATM 8 C CBK 9SZ . . . B 2 -37.831 -8.666 20.576 1 53.51 ? CBK 9SZ 301 A 1 HETATM 9 C CBJ 9SZ . . . B 2 -38.942 -8.899 21.631 1 53.89 ? CBJ 9SZ 301 A 1 HETATM 10 C CBL 9SZ . . . B 2 -36.698 -8.267 21.506 1 54.18 ? CBL 9SZ 301 A 1 HETATM 11 C CBM 9SZ . . . B 2 -35.326 -8.483 21.49 1 54.89 ? CBM 9SZ 301 A 1 HETATM 12 C CBN 9SZ . . . B 2 -34.511 -7.997 22.503 1 55.43 ? CBN 9SZ 301 A 1 HETATM 13 C CBT 9SZ . . . B 2 -33.02 -8.058 22.766 1 55.53 ? CBT 9SZ 301 A 1 HETATM 14 C CBS 9SZ . . . B 2 -33.068 -8.166 24.32 1 55.56 ? CBS 9SZ 301 A 1 HETATM 15 C CBU 9SZ . . . B 2 -32.543 -6.627 22.663 1 55.75 ? CBU 9SZ 301 A 1 HETATM 16 C CBV 9SZ . . . B 2 -31.705 -6.011 21.756 1 55.77 ? CBV 9SZ 301 A 1 HETATM 17 C CBW 9SZ . . . B 2 -31.431 -4.646 21.905 1 54.78 ? CBW 9SZ 301 A 1 HETATM 18 C CBX 9SZ . . . B 2 -32.01 -3.927 22.97 1 54.6 ? CBX 9SZ 301 A 1 HETATM 19 C CBY 9SZ . . . B 2 -32.856 -4.582 23.872 1 54.65 ? CBY 9SZ 301 A 1 HETATM 20 C CBZ 9SZ . . . B 2 -33.105 -5.928 23.698 1 55.43 ? CBZ 9SZ 301 A 1 HETATM 21 C CBR 9SZ . . . B 2 -33.958 -6.893 24.491 1 55.56 ? CBR 9SZ 301 A 1 HETATM 22 C CBO 9SZ . . . B 2 -35.084 -7.286 23.556 1 55.58 ? CBO 9SZ 301 A 1 HETATM 23 C CBP 9SZ . . . B 2 -36.459 -7.078 23.569 1 54.71 ? CBP 9SZ 301 A 1 HETATM 24 C CBQ 9SZ . . . B 2 -37.272 -7.569 22.557 1 54.04 ? CBQ 9SZ 301 A 1 HETATM 25 C CBI 9SZ . . . B 2 -38.755 -7.504 22.287 1 53.49 ? CBI 9SZ 301 A 1 HETATM 26 C CAH 9SZ . . . B 2 -38.919 -6.634 21.051 1 53.76 ? CAH 9SZ 301 A 1 HETATM 27 C CAI 9SZ . . . B 2 -39.467 -5.381 20.798 1 54.37 ? CAI 9SZ 301 A 1 HETATM 28 O OAJ 9SZ . . . B 2 -40.041 -4.666 21.857 1 56.42 ? OAJ 9SZ 301 A 1 HETATM 29 P PAK 9SZ . . . B 2 -39.23 -4.485 23.244 1 58.58 ? PAK 9SZ 301 A 1 HETATM 30 O OAM 9SZ . . . B 2 -39.736 -3.153 23.846 1 57.23 ? OAM 9SZ 301 A 1 HETATM 31 O OAN 9SZ . . . B 2 -39.765 -5.592 24.183 1 57.72 ? OAN 9SZ 301 A 1 HETATM 32 O OAL 9SZ . . . B 2 -37.761 -4.526 23.071 1 57.16 ? OAL 9SZ 301 A 1 HETATM 33 C CAO 9SZ . . . B 2 -39.462 -4.815 19.529 1 53.43 ? CAO 9SZ 301 A 1 HETATM 34 C CAP 9SZ . . . B 2 -38.893 -5.536 18.465 1 53.47 ? CAP 9SZ 301 A 1 HETATM 35 C CAQ 9SZ . . . B 2 -39.036 -4.674 17.232 1 53.34 ? CAQ 9SZ 301 A 1 HETATM 36 C CAR 9SZ . . . B 2 -40.415 -4.019 17.554 1 52.91 ? CAR 9SZ 301 A 1 HETATM 37 C CAS 9SZ . . . B 2 -39.985 -3.503 18.967 1 53 ? CAS 9SZ 301 A 1 HETATM 38 C CAT 9SZ . . . B 2 -38.727 -2.777 18.55 1 52.37 ? CAT 9SZ 301 A 1 HETATM 39 C CAY 9SZ . . . B 2 -38.164 -3.482 17.492 1 52.99 ? CAY 9SZ 301 A 1 HETATM 40 C CAX 9SZ . . . B 2 -36.983 -3.027 16.911 1 52.24 ? CAX 9SZ 301 A 1 HETATM 41 C CAW 9SZ . . . B 2 -36.372 -1.871 17.367 1 49.59 ? CAW 9SZ 301 A 1 HETATM 42 C CAZ 9SZ . . . B 2 -35.116 -1.119 16.965 1 47.13 ? CAZ 9SZ 301 A 1 HETATM 43 C CBA 9SZ . . . B 2 -35.613 0.331 17.218 1 47.13 ? CBA 9SZ 301 A 1 HETATM 44 C CBH 9SZ . . . B 2 -34.201 -1.261 18.156 1 45.65 ? CBH 9SZ 301 A 1 HETATM 45 C CBG 9SZ . . . B 2 -33.006 -1.935 18.308 1 44.99 ? CBG 9SZ 301 A 1 HETATM 46 C CBF 9SZ . . . B 2 -32.361 -1.896 19.549 1 44.48 ? CBF 9SZ 301 A 1 HETATM 47 C CBE 9SZ . . . B 2 -32.937 -1.176 20.615 1 44.6 ? CBE 9SZ 301 A 1 HETATM 48 C CBD 9SZ . . . B 2 -34.15 -0.505 20.424 1 45.74 ? CBD 9SZ 301 A 1 HETATM 49 C CBC 9SZ . . . B 2 -34.758 -0.564 19.187 1 46.17 ? CBC 9SZ 301 A 1 HETATM 50 C CBB 9SZ . . . B 2 -36.044 0.041 18.681 1 47.63 ? CBB 9SZ 301 A 1 HETATM 51 C CAV 9SZ . . . B 2 -36.938 -1.153 18.425 1 49.3 ? CAV 9SZ 301 A 1 HETATM 52 C CAU 9SZ . . . B 2 -38.112 -1.61 19.006 1 50.9 ? CAU 9SZ 301 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 52 #