data_5OEI # _model_server_result.job_id k9l0_FHnqRhdc7xWmQQuwA _model_server_result.datetime_utc '2024-11-28 12:36:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oei # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":407}' # _entry.id 5OEI # _exptl.entry_id 5OEI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OEI _cell.length_a 47.314 _cell.length_b 168.468 _cell.length_c 82.537 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OEI _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 5OEI _atom_sites.fract_transf_matrix[1][1] 0.021135 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005936 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012116 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OOG A 1 401 1 OOG oxo . C 3 SO4 A 1 402 1 SO4 SO4 . D 3 SO4 A 1 403 2 SO4 SO4 . E 3 SO4 A 1 404 3 SO4 SO4 . F 3 SO4 A 1 405 4 SO4 SO4 . G 3 SO4 A 1 406 5 SO4 SO4 . H 4 GOL A 1 407 1 GOL GOL . I 5 HOH A 1 501 104 HOH HOH . I 5 HOH A 2 502 56 HOH HOH . I 5 HOH A 3 503 94 HOH HOH . I 5 HOH A 4 504 100 HOH HOH . I 5 HOH A 5 505 11 HOH HOH . I 5 HOH A 6 506 99 HOH HOH . I 5 HOH A 7 507 41 HOH HOH . I 5 HOH A 8 508 16 HOH HOH . I 5 HOH A 9 509 15 HOH HOH . I 5 HOH A 10 510 83 HOH HOH . I 5 HOH A 11 511 20 HOH HOH . I 5 HOH A 12 512 73 HOH HOH . I 5 HOH A 13 513 67 HOH HOH . I 5 HOH A 14 514 32 HOH HOH . I 5 HOH A 15 515 60 HOH HOH . I 5 HOH A 16 516 47 HOH HOH . I 5 HOH A 17 517 93 HOH HOH . I 5 HOH A 18 518 53 HOH HOH . I 5 HOH A 19 519 17 HOH HOH . I 5 HOH A 20 520 57 HOH HOH . I 5 HOH A 21 521 84 HOH HOH . I 5 HOH A 22 522 51 HOH HOH . I 5 HOH A 23 523 74 HOH HOH . I 5 HOH A 24 524 96 HOH HOH . I 5 HOH A 25 525 102 HOH HOH . I 5 HOH A 26 526 110 HOH HOH . I 5 HOH A 27 527 5 HOH HOH . I 5 HOH A 28 528 40 HOH HOH . I 5 HOH A 29 529 81 HOH HOH . I 5 HOH A 30 530 70 HOH HOH . I 5 HOH A 31 531 65 HOH HOH . I 5 HOH A 32 532 19 HOH HOH . I 5 HOH A 33 533 55 HOH HOH . I 5 HOH A 34 534 50 HOH HOH . I 5 HOH A 35 535 80 HOH HOH . I 5 HOH A 36 536 82 HOH HOH . I 5 HOH A 37 537 97 HOH HOH . I 5 HOH A 38 538 79 HOH HOH . I 5 HOH A 39 539 69 HOH HOH . I 5 HOH A 40 540 63 HOH HOH . I 5 HOH A 41 541 33 HOH HOH . I 5 HOH A 42 542 31 HOH HOH . I 5 HOH A 43 543 3 HOH HOH . I 5 HOH A 44 544 103 HOH HOH . I 5 HOH A 45 545 29 HOH HOH . I 5 HOH A 46 546 101 HOH HOH . I 5 HOH A 47 547 8 HOH HOH . I 5 HOH A 48 548 4 HOH HOH . I 5 HOH A 49 549 9 HOH HOH . I 5 HOH A 50 550 26 HOH HOH . I 5 HOH A 51 551 68 HOH HOH . I 5 HOH A 52 552 2 HOH HOH . I 5 HOH A 53 553 76 HOH HOH . I 5 HOH A 54 554 38 HOH HOH . I 5 HOH A 55 555 71 HOH HOH . I 5 HOH A 56 556 28 HOH HOH . I 5 HOH A 57 557 54 HOH HOH . I 5 HOH A 58 558 64 HOH HOH . I 5 HOH A 59 559 13 HOH HOH . I 5 HOH A 60 560 14 HOH HOH . I 5 HOH A 61 561 89 HOH HOH . I 5 HOH A 62 562 95 HOH HOH . I 5 HOH A 63 563 52 HOH HOH . I 5 HOH A 64 564 1 HOH HOH . I 5 HOH A 65 565 46 HOH HOH . I 5 HOH A 66 566 27 HOH HOH . I 5 HOH A 67 567 37 HOH HOH . I 5 HOH A 68 568 86 HOH HOH . I 5 HOH A 69 569 62 HOH HOH . I 5 HOH A 70 570 58 HOH HOH . I 5 HOH A 71 571 66 HOH HOH . I 5 HOH A 72 572 22 HOH HOH . I 5 HOH A 73 573 23 HOH HOH . I 5 HOH A 74 574 77 HOH HOH . I 5 HOH A 75 575 48 HOH HOH . I 5 HOH A 76 576 88 HOH HOH . I 5 HOH A 77 577 43 HOH HOH . I 5 HOH A 78 578 87 HOH HOH . I 5 HOH A 79 579 25 HOH HOH . I 5 HOH A 80 580 30 HOH HOH . I 5 HOH A 81 581 39 HOH HOH . I 5 HOH A 82 582 42 HOH HOH . I 5 HOH A 83 583 111 HOH HOH . I 5 HOH A 84 584 12 HOH HOH . I 5 HOH A 85 585 78 HOH HOH . I 5 HOH A 86 586 85 HOH HOH . I 5 HOH A 87 587 49 HOH HOH . I 5 HOH A 88 588 61 HOH HOH . I 5 HOH A 89 589 24 HOH HOH . I 5 HOH A 90 590 98 HOH HOH . I 5 HOH A 91 591 72 HOH HOH . I 5 HOH A 92 592 92 HOH HOH . I 5 HOH A 93 593 10 HOH HOH . I 5 HOH A 94 594 34 HOH HOH . I 5 HOH A 95 595 114 HOH HOH . I 5 HOH A 96 596 7 HOH HOH . I 5 HOH A 97 597 91 HOH HOH . I 5 HOH A 98 598 6 HOH HOH . I 5 HOH A 99 599 44 HOH HOH . I 5 HOH A 100 600 59 HOH HOH . I 5 HOH A 101 601 36 HOH HOH . I 5 HOH A 102 602 90 HOH HOH . I 5 HOH A 103 603 112 HOH HOH . I 5 HOH A 104 604 115 HOH HOH . I 5 HOH A 105 605 105 HOH HOH . I 5 HOH A 106 606 21 HOH HOH . I 5 HOH A 107 607 35 HOH HOH . I 5 HOH A 108 608 45 HOH HOH . I 5 HOH A 109 609 109 HOH HOH . I 5 HOH A 110 610 18 HOH HOH . I 5 HOH A 111 611 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 4 25.545 204.788 85.022 1 27.63 ? C1 GOL 407 A 1 HETATM 2 O O1 GOL . . . H 4 25.573 204.367 83.684 1 21.55 ? O1 GOL 407 A 1 HETATM 3 C C2 GOL . . . H 4 26.25 203.76 85.8 1 31.6 ? C2 GOL 407 A 1 HETATM 4 O O2 GOL . . . H 4 25.586 202.553 85.469 1 34.46 ? O2 GOL 407 A 1 HETATM 5 C C3 GOL . . . H 4 26.16 204.08 87.308 1 32.2 ? C3 GOL 407 A 1 HETATM 6 O O3 GOL . . . H 4 25.117 203.306 87.873 1 34.01 ? O3 GOL 407 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 6 #