data_5OEP
#
_model_server_result.job_id            kL_CkWPJTem83Sa17SErbA 
_model_server_result.datetime_utc      '2024-12-02 16:02:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5oep 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    5OEP 
#
_exptl.entry_id    5OEP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.52 
_cell.angle_gamma         90 
_cell.entry_id            5OEP 
_cell.length_a            78.3 
_cell.length_b            84.54 
_cell.length_c            80.97 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OEP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,H 1 1 
B,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 123 n n 
PA O2A FAD sing 124 n n 
PA O5B FAD sing 125 n n 
PA O3P FAD sing 126 n n 
O2A HOA2 FAD sing 127 n n 
O5B C5B FAD sing 128 n n 
C5B C4B FAD sing 129 n n 
C5B H51A FAD sing 130 n n 
C5B H52A FAD sing 131 n n 
C4B O4B FAD sing 132 n n 
C4B C3B FAD sing 133 n n 
C4B H4B FAD sing 134 n n 
O4B C1B FAD sing 135 n n 
C3B O3B FAD sing 136 n n 
C3B C2B FAD sing 137 n n 
C3B H3B FAD sing 138 n n 
O3B HO3A FAD sing 139 n n 
C2B O2B FAD sing 140 n n 
C2B C1B FAD sing 141 n n 
C2B H2B FAD sing 142 n n 
O2B HO2A FAD sing 143 n n 
C1B N9A FAD sing 144 n n 
C1B H1B FAD sing 145 n n 
N9A C8A FAD sing 146 n y 
N9A C4A FAD sing 147 n y 
C8A N7A FAD doub 148 n y 
C8A H8A FAD sing 149 n n 
N7A C5A FAD sing 150 n y 
C5A C6A FAD sing 151 n y 
C5A C4A FAD doub 152 n y 
C6A N6A FAD sing 153 n n 
C6A N1A FAD doub 154 n y 
N6A H61A FAD sing 155 n n 
N6A H62A FAD sing 156 n n 
N1A C2A FAD sing 157 n y 
C2A N3A FAD doub 158 n y 
C2A H2A FAD sing 159 n n 
N3A C4A FAD sing 160 n y 
N1 C2 FAD sing 161 n n 
N1 C10 FAD doub 162 n n 
C2 O2 FAD doub 163 n n 
C2 N3 FAD sing 164 n n 
N3 C4 FAD sing 165 n n 
N3 HN3 FAD sing 166 n n 
C4 O4 FAD doub 167 n n 
C4 C4X FAD sing 168 n n 
C4X N5 FAD doub 169 n n 
C4X C10 FAD sing 170 n n 
N5 C5X FAD sing 171 n n 
C5X C6 FAD doub 172 n y 
C5X C9A FAD sing 173 n y 
C6 C7 FAD sing 174 n y 
C6 H6 FAD sing 175 n n 
C7 C7M FAD sing 176 n n 
C7 C8 FAD doub 177 n y 
C7M HM71 FAD sing 178 n n 
C7M HM72 FAD sing 179 n n 
C7M HM73 FAD sing 180 n n 
C8 C8M FAD sing 181 n n 
C8 C9 FAD sing 182 n y 
C8M HM81 FAD sing 183 n n 
C8M HM82 FAD sing 184 n n 
C8M HM83 FAD sing 185 n n 
C9 C9A FAD doub 186 n y 
C9 H9 FAD sing 187 n n 
C9A N10 FAD sing 188 n n 
N10 C10 FAD sing 189 n n 
N10 C1' FAD sing 190 n n 
C1' C2' FAD sing 191 n n 
C1' "H1'1" FAD sing 192 n n 
C1' "H1'2" FAD sing 193 n n 
C2' O2' FAD sing 194 n n 
C2' C3' FAD sing 195 n n 
C2' H2' FAD sing 196 n n 
O2' HO2' FAD sing 197 n n 
C3' O3' FAD sing 198 n n 
C3' C4' FAD sing 199 n n 
C3' H3' FAD sing 200 n n 
O3' HO3' FAD sing 201 n n 
C4' O4' FAD sing 202 n n 
C4' C5' FAD sing 203 n n 
C4' H4' FAD sing 204 n n 
O4' HO4' FAD sing 205 n n 
C5' O5' FAD sing 206 n n 
C5' "H5'1" FAD sing 207 n n 
C5' "H5'2" FAD sing 208 n n 
O5' P FAD sing 209 n n 
P O1P FAD doub 210 n n 
P O2P FAD sing 211 n n 
P O3P FAD sing 212 n n 
O2P HOP2 FAD sing 213 n n 
#
_atom_sites.entry_id                     5OEP 
_atom_sites.fract_transf_matrix[1][1]    0.012771 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003071 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011829 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012702 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 501 900 FAD FAD . 
D 3 9T2 A 1 502 501 9T2 P98 . 
E 4 IMD A 1 503 1 IMD IMD . 
F 2 FAD B 1 501 900 FAD FAD . 
G 3 9T2 B 1 502 501 9T2 P98 . 
H 5 HOH A 1 601 46 HOH HOH . 
H 5 HOH A 2 602 28 HOH HOH . 
H 5 HOH A 3 603 45 HOH HOH . 
H 5 HOH A 4 604 40 HOH HOH . 
H 5 HOH A 5 605 39 HOH HOH . 
H 5 HOH A 6 606 61 HOH HOH . 
H 5 HOH A 7 607 14 HOH HOH . 
H 5 HOH A 8 608 6 HOH HOH . 
H 5 HOH A 9 609 27 HOH HOH . 
H 5 HOH A 10 610 25 HOH HOH . 
H 5 HOH A 11 611 43 HOH HOH . 
H 5 HOH A 12 612 42 HOH HOH . 
H 5 HOH A 13 613 34 HOH HOH . 
H 5 HOH A 14 614 26 HOH HOH . 
H 5 HOH A 15 615 35 HOH HOH . 
H 5 HOH A 16 616 21 HOH HOH . 
H 5 HOH A 17 617 7 HOH HOH . 
H 5 HOH A 18 618 32 HOH HOH . 
H 5 HOH A 19 619 41 HOH HOH . 
H 5 HOH A 20 620 56 HOH HOH . 
H 5 HOH A 21 621 3 HOH HOH . 
H 5 HOH A 22 622 57 HOH HOH . 
H 5 HOH A 23 623 18 HOH HOH . 
H 5 HOH A 24 624 58 HOH HOH . 
H 5 HOH A 25 625 52 HOH HOH . 
H 5 HOH A 26 626 23 HOH HOH . 
H 5 HOH A 27 627 37 HOH HOH . 
H 5 HOH A 28 628 31 HOH HOH . 
H 5 HOH A 29 629 44 HOH HOH . 
H 5 HOH A 30 630 22 HOH HOH . 
H 5 HOH A 31 631 33 HOH HOH . 
H 5 HOH A 32 632 5 HOH HOH . 
H 5 HOH A 33 633 17 HOH HOH . 
H 5 HOH A 34 634 59 HOH HOH . 
H 5 HOH A 35 635 47 HOH HOH . 
H 5 HOH A 36 636 62 HOH HOH . 
I 5 HOH B 1 601 49 HOH HOH . 
I 5 HOH B 2 602 19 HOH HOH . 
I 5 HOH B 3 603 24 HOH HOH . 
I 5 HOH B 4 604 8 HOH HOH . 
I 5 HOH B 5 605 51 HOH HOH . 
I 5 HOH B 6 606 1 HOH HOH . 
I 5 HOH B 7 607 11 HOH HOH . 
I 5 HOH B 8 608 4 HOH HOH . 
I 5 HOH B 9 609 16 HOH HOH . 
I 5 HOH B 10 610 2 HOH HOH . 
I 5 HOH B 11 611 54 HOH HOH . 
I 5 HOH B 12 612 9 HOH HOH . 
I 5 HOH B 13 613 12 HOH HOH . 
I 5 HOH B 14 614 53 HOH HOH . 
I 5 HOH B 15 615 30 HOH HOH . 
I 5 HOH B 16 616 60 HOH HOH . 
I 5 HOH B 17 617 55 HOH HOH . 
I 5 HOH B 18 618 48 HOH HOH . 
I 5 HOH B 19 619 50 HOH HOH . 
I 5 HOH B 20 620 10 HOH HOH . 
I 5 HOH B 21 621 13 HOH HOH . 
I 5 HOH B 22 622 15 HOH HOH . 
I 5 HOH B 23 623 36 HOH HOH . 
I 5 HOH B 24 624 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 2 3.302 -6.865 41.34 1 40.31 ? PA FAD 501 A 1 
HETATM 2 O O1A FAD . . . C 2 4.195 -7.913 41.888 1 40.87 ? O1A FAD 501 A 1 
HETATM 3 O O2A FAD . . . C 2 1.844 -6.84 41.749 1 40.9 ? O2A FAD 501 A 1 
HETATM 4 O O5B FAD . . . C 2 3.974 -5.422 41.535 1 39.66 ? O5B FAD 501 A 1 
HETATM 5 C C5B FAD . . . C 2 5.406 -5.306 41.423 1 39.72 ? C5B FAD 501 A 1 
HETATM 6 C C4B FAD . . . C 2 5.793 -3.824 41.419 1 40.47 ? C4B FAD 501 A 1 
HETATM 7 O O4B FAD . . . C 2 5.268 -3.222 40.232 1 40.88 ? O4B FAD 501 A 1 
HETATM 8 C C3B FAD . . . C 2 5.211 -3.001 42.567 1 41.91 ? C3B FAD 501 A 1 
HETATM 9 O O3B FAD . . . C 2 6.193 -2.023 42.842 1 40.83 ? O3B FAD 501 A 1 
HETATM 10 C C2B FAD . . . C 2 4.002 -2.334 41.951 1 44.09 ? C2B FAD 501 A 1 
HETATM 11 O O2B FAD . . . C 2 3.629 -1.11 42.588 1 45.58 ? O2B FAD 501 A 1 
HETATM 12 C C1B FAD . . . C 2 4.508 -2.094 40.538 1 41.97 ? C1B FAD 501 A 1 
HETATM 13 N N9A FAD . . . C 2 3.401 -1.978 39.61 1 43.48 ? N9A FAD 501 A 1 
HETATM 14 C C8A FAD . . . C 2 2.568 -2.956 39.228 1 43.96 ? C8A FAD 501 A 1 
HETATM 15 N N7A FAD . . . C 2 1.626 -2.461 38.391 1 43.7 ? N7A FAD 501 A 1 
HETATM 16 C C5A FAD . . . C 2 1.863 -1.15 38.208 1 43.96 ? C5A FAD 501 A 1 
HETATM 17 C C6A FAD . . . C 2 1.25 -0.027 37.431 1 44.38 ? C6A FAD 501 A 1 
HETATM 18 N N6A FAD . . . C 2 0.171 -0.253 36.649 1 45.52 ? N6A FAD 501 A 1 
HETATM 19 N N1A FAD . . . C 2 1.804 1.208 37.522 1 44.33 ? N1A FAD 501 A 1 
HETATM 20 C C2A FAD . . . C 2 2.883 1.439 38.308 1 44.04 ? C2A FAD 501 A 1 
HETATM 21 N N3A FAD . . . C 2 3.502 0.473 39.031 1 43.63 ? N3A FAD 501 A 1 
HETATM 22 C C4A FAD . . . C 2 3.044 -0.824 39.025 1 44.41 ? C4A FAD 501 A 1 
HETATM 23 N N1 FAD . . . C 2 11.6 -11.133 37.418 1 33.53 ? N1 FAD 501 A 1 
HETATM 24 C C2 FAD . . . C 2 12.585 -10.997 36.524 1 33.06 ? C2 FAD 501 A 1 
HETATM 25 O O2 FAD . . . C 2 13.023 -9.841 36.302 1 34.16 ? O2 FAD 501 A 1 
HETATM 26 N N3 FAD . . . C 2 13.095 -12.044 35.838 1 33.39 ? N3 FAD 501 A 1 
HETATM 27 C C4 FAD . . . C 2 12.632 -13.288 36.029 1 35.51 ? C4 FAD 501 A 1 
HETATM 28 O O4 FAD . . . C 2 13.071 -14.256 35.387 1 39.25 ? O4 FAD 501 A 1 
HETATM 29 C C4X FAD . . . C 2 11.576 -13.541 37.029 1 36.49 ? C4X FAD 501 A 1 
HETATM 30 N N5 FAD . . . C 2 11.076 -14.768 37.261 1 37.23 ? N5 FAD 501 A 1 
HETATM 31 C C5X FAD . . . C 2 10.084 -14.952 38.16 1 36.63 ? C5X FAD 501 A 1 
HETATM 32 C C6 FAD . . . C 2 9.573 -16.245 38.353 1 37.33 ? C6 FAD 501 A 1 
HETATM 33 C C7 FAD . . . C 2 8.546 -16.435 39.271 1 38.84 ? C7 FAD 501 A 1 
HETATM 34 C C7M FAD . . . C 2 8.02 -17.816 39.531 1 40.82 ? C7M FAD 501 A 1 
HETATM 35 C C8 FAD . . . C 2 7.972 -15.271 40.017 1 39.52 ? C8 FAD 501 A 1 
HETATM 36 C C8M FAD . . . C 2 6.868 -15.478 41.034 1 41.26 ? C8M FAD 501 A 1 
HETATM 37 C C9 FAD . . . C 2 8.477 -13.993 39.817 1 37.29 ? C9 FAD 501 A 1 
HETATM 38 C C9A FAD . . . C 2 9.514 -13.787 38.901 1 35.75 ? C9A FAD 501 A 1 
HETATM 39 N N10 FAD . . . C 2 10.044 -12.507 38.671 1 35.28 ? N10 FAD 501 A 1 
HETATM 40 C C10 FAD . . . C 2 11.077 -12.347 37.733 1 35.62 ? C10 FAD 501 A 1 
HETATM 41 C C1' FAD . . . C 2 9.562 -11.307 39.362 1 36.7 ? C1' FAD 501 A 1 
HETATM 42 C C2' FAD . . . C 2 8.459 -10.683 38.532 1 39.03 ? C2' FAD 501 A 1 
HETATM 43 O O2' FAD . . . C 2 8.847 -10.722 37.14 1 38.97 ? O2' FAD 501 A 1 
HETATM 44 C C3' FAD . . . C 2 8.348 -9.247 38.965 1 39.05 ? C3' FAD 501 A 1 
HETATM 45 O O3' FAD . . . C 2 8.23 -9.192 40.401 1 40.4 ? O3' FAD 501 A 1 
HETATM 46 C C4' FAD . . . C 2 7.158 -8.582 38.295 1 39.01 ? C4' FAD 501 A 1 
HETATM 47 O O4' FAD . . . C 2 7.322 -7.208 38.636 1 39.21 ? O4' FAD 501 A 1 
HETATM 48 C C5' FAD . . . C 2 5.813 -9.106 38.837 1 40.26 ? C5' FAD 501 A 1 
HETATM 49 O O5' FAD . . . C 2 4.759 -8.438 38.181 1 38.48 ? O5' FAD 501 A 1 
HETATM 50 P P FAD . . . C 2 3.322 -8.243 38.81 1 40.82 ? P FAD 501 A 1 
HETATM 51 O O1P FAD . . . C 2 2.395 -7.709 37.74 1 41.48 ? O1P FAD 501 A 1 
HETATM 52 O O2P FAD . . . C 2 2.881 -9.452 39.625 1 42.86 ? O2P FAD 501 A 1 
HETATM 53 O O3P FAD . . . C 2 3.508 -6.95 39.752 1 40.65 ? O3P FAD 501 A 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           333 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           53 
#