data_5OEP
#
_model_server_result.job_id            R45-9p7lf5JIC0-KfVcXvg 
_model_server_result.datetime_utc      '2025-02-27 02:10:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5oep 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
#
_entry.id    5OEP 
#
_exptl.entry_id    5OEP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.52 
_cell.angle_gamma         90 
_cell.entry_id            5OEP 
_cell.length_a            78.3 
_cell.length_b            84.54 
_cell.length_c            80.97 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OEP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,H 1 1 
B,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 123 n n 
PA O2A FAD sing 124 n n 
PA O5B FAD sing 125 n n 
PA O3P FAD sing 126 n n 
O2A HOA2 FAD sing 127 n n 
O5B C5B FAD sing 128 n n 
C5B C4B FAD sing 129 n n 
C5B H51A FAD sing 130 n n 
C5B H52A FAD sing 131 n n 
C4B O4B FAD sing 132 n n 
C4B C3B FAD sing 133 n n 
C4B H4B FAD sing 134 n n 
O4B C1B FAD sing 135 n n 
C3B O3B FAD sing 136 n n 
C3B C2B FAD sing 137 n n 
C3B H3B FAD sing 138 n n 
O3B HO3A FAD sing 139 n n 
C2B O2B FAD sing 140 n n 
C2B C1B FAD sing 141 n n 
C2B H2B FAD sing 142 n n 
O2B HO2A FAD sing 143 n n 
C1B N9A FAD sing 144 n n 
C1B H1B FAD sing 145 n n 
N9A C8A FAD sing 146 n y 
N9A C4A FAD sing 147 n y 
C8A N7A FAD doub 148 n y 
C8A H8A FAD sing 149 n n 
N7A C5A FAD sing 150 n y 
C5A C6A FAD sing 151 n y 
C5A C4A FAD doub 152 n y 
C6A N6A FAD sing 153 n n 
C6A N1A FAD doub 154 n y 
N6A H61A FAD sing 155 n n 
N6A H62A FAD sing 156 n n 
N1A C2A FAD sing 157 n y 
C2A N3A FAD doub 158 n y 
C2A H2A FAD sing 159 n n 
N3A C4A FAD sing 160 n y 
N1 C2 FAD sing 161 n n 
N1 C10 FAD doub 162 n n 
C2 O2 FAD doub 163 n n 
C2 N3 FAD sing 164 n n 
N3 C4 FAD sing 165 n n 
N3 HN3 FAD sing 166 n n 
C4 O4 FAD doub 167 n n 
C4 C4X FAD sing 168 n n 
C4X N5 FAD doub 169 n n 
C4X C10 FAD sing 170 n n 
N5 C5X FAD sing 171 n n 
C5X C6 FAD doub 172 n y 
C5X C9A FAD sing 173 n y 
C6 C7 FAD sing 174 n y 
C6 H6 FAD sing 175 n n 
C7 C7M FAD sing 176 n n 
C7 C8 FAD doub 177 n y 
C7M HM71 FAD sing 178 n n 
C7M HM72 FAD sing 179 n n 
C7M HM73 FAD sing 180 n n 
C8 C8M FAD sing 181 n n 
C8 C9 FAD sing 182 n y 
C8M HM81 FAD sing 183 n n 
C8M HM82 FAD sing 184 n n 
C8M HM83 FAD sing 185 n n 
C9 C9A FAD doub 186 n y 
C9 H9 FAD sing 187 n n 
C9A N10 FAD sing 188 n n 
N10 C10 FAD sing 189 n n 
N10 C1' FAD sing 190 n n 
C1' C2' FAD sing 191 n n 
C1' "H1'1" FAD sing 192 n n 
C1' "H1'2" FAD sing 193 n n 
C2' O2' FAD sing 194 n n 
C2' C3' FAD sing 195 n n 
C2' H2' FAD sing 196 n n 
O2' HO2' FAD sing 197 n n 
C3' O3' FAD sing 198 n n 
C3' C4' FAD sing 199 n n 
C3' H3' FAD sing 200 n n 
O3' HO3' FAD sing 201 n n 
C4' O4' FAD sing 202 n n 
C4' C5' FAD sing 203 n n 
C4' H4' FAD sing 204 n n 
O4' HO4' FAD sing 205 n n 
C5' O5' FAD sing 206 n n 
C5' "H5'1" FAD sing 207 n n 
C5' "H5'2" FAD sing 208 n n 
O5' P FAD sing 209 n n 
P O1P FAD doub 210 n n 
P O2P FAD sing 211 n n 
P O3P FAD sing 212 n n 
O2P HOP2 FAD sing 213 n n 
#
_atom_sites.entry_id                     5OEP 
_atom_sites.fract_transf_matrix[1][1]    0.012771 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003071 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011829 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012702 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 501 900 FAD FAD . 
D 3 9T2 A 1 502 501 9T2 P98 . 
E 4 IMD A 1 503 1 IMD IMD . 
F 2 FAD B 1 501 900 FAD FAD . 
G 3 9T2 B 1 502 501 9T2 P98 . 
H 5 HOH A 1 601 46 HOH HOH . 
H 5 HOH A 2 602 28 HOH HOH . 
H 5 HOH A 3 603 45 HOH HOH . 
H 5 HOH A 4 604 40 HOH HOH . 
H 5 HOH A 5 605 39 HOH HOH . 
H 5 HOH A 6 606 61 HOH HOH . 
H 5 HOH A 7 607 14 HOH HOH . 
H 5 HOH A 8 608 6 HOH HOH . 
H 5 HOH A 9 609 27 HOH HOH . 
H 5 HOH A 10 610 25 HOH HOH . 
H 5 HOH A 11 611 43 HOH HOH . 
H 5 HOH A 12 612 42 HOH HOH . 
H 5 HOH A 13 613 34 HOH HOH . 
H 5 HOH A 14 614 26 HOH HOH . 
H 5 HOH A 15 615 35 HOH HOH . 
H 5 HOH A 16 616 21 HOH HOH . 
H 5 HOH A 17 617 7 HOH HOH . 
H 5 HOH A 18 618 32 HOH HOH . 
H 5 HOH A 19 619 41 HOH HOH . 
H 5 HOH A 20 620 56 HOH HOH . 
H 5 HOH A 21 621 3 HOH HOH . 
H 5 HOH A 22 622 57 HOH HOH . 
H 5 HOH A 23 623 18 HOH HOH . 
H 5 HOH A 24 624 58 HOH HOH . 
H 5 HOH A 25 625 52 HOH HOH . 
H 5 HOH A 26 626 23 HOH HOH . 
H 5 HOH A 27 627 37 HOH HOH . 
H 5 HOH A 28 628 31 HOH HOH . 
H 5 HOH A 29 629 44 HOH HOH . 
H 5 HOH A 30 630 22 HOH HOH . 
H 5 HOH A 31 631 33 HOH HOH . 
H 5 HOH A 32 632 5 HOH HOH . 
H 5 HOH A 33 633 17 HOH HOH . 
H 5 HOH A 34 634 59 HOH HOH . 
H 5 HOH A 35 635 47 HOH HOH . 
H 5 HOH A 36 636 62 HOH HOH . 
I 5 HOH B 1 601 49 HOH HOH . 
I 5 HOH B 2 602 19 HOH HOH . 
I 5 HOH B 3 603 24 HOH HOH . 
I 5 HOH B 4 604 8 HOH HOH . 
I 5 HOH B 5 605 51 HOH HOH . 
I 5 HOH B 6 606 1 HOH HOH . 
I 5 HOH B 7 607 11 HOH HOH . 
I 5 HOH B 8 608 4 HOH HOH . 
I 5 HOH B 9 609 16 HOH HOH . 
I 5 HOH B 10 610 2 HOH HOH . 
I 5 HOH B 11 611 54 HOH HOH . 
I 5 HOH B 12 612 9 HOH HOH . 
I 5 HOH B 13 613 12 HOH HOH . 
I 5 HOH B 14 614 53 HOH HOH . 
I 5 HOH B 15 615 30 HOH HOH . 
I 5 HOH B 16 616 60 HOH HOH . 
I 5 HOH B 17 617 55 HOH HOH . 
I 5 HOH B 18 618 48 HOH HOH . 
I 5 HOH B 19 619 50 HOH HOH . 
I 5 HOH B 20 620 10 HOH HOH . 
I 5 HOH B 21 621 13 HOH HOH . 
I 5 HOH B 22 622 15 HOH HOH . 
I 5 HOH B 23 623 36 HOH HOH . 
I 5 HOH B 24 624 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . F 2 -12.308 -19.213 -4.202 1 47.09 ? PA FAD 501 B 1 
HETATM 2 O O1A FAD . . . F 2 -13.413 -20.218 -4.099 1 46.92 ? O1A FAD 501 B 1 
HETATM 3 O O2A FAD . . . F 2 -10.928 -19.671 -4.528 1 49 ? O2A FAD 501 B 1 
HETATM 4 O O5B FAD . . . F 2 -12.63 -18.049 -5.237 1 47.6 ? O5B FAD 501 B 1 
HETATM 5 C C5B FAD . . . F 2 -14.002 -17.652 -5.379 1 46 ? C5B FAD 501 B 1 
HETATM 6 C C4B FAD . . . F 2 -14.119 -16.334 -6.117 1 44.69 ? C4B FAD 501 B 1 
HETATM 7 O O4B FAD . . . F 2 -13.468 -15.292 -5.386 1 43.3 ? O4B FAD 501 B 1 
HETATM 8 C C3B FAD . . . F 2 -13.468 -16.393 -7.478 1 46.41 ? C3B FAD 501 B 1 
HETATM 9 O O3B FAD . . . F 2 -14.24 -15.557 -8.312 1 44.65 ? O3B FAD 501 B 1 
HETATM 10 C C2B FAD . . . F 2 -12.155 -15.673 -7.258 1 47.83 ? C2B FAD 501 B 1 
HETATM 11 O O2B FAD . . . F 2 -11.655 -15.061 -8.443 1 49.68 ? O2B FAD 501 B 1 
HETATM 12 C C1B FAD . . . F 2 -12.525 -14.631 -6.234 1 46.03 ? C1B FAD 501 B 1 
HETATM 13 N N9A FAD . . . F 2 -11.354 -14.194 -5.469 1 48.28 ? N9A FAD 501 B 1 
HETATM 14 C C8A FAD . . . F 2 -10.724 -14.898 -4.494 1 48.73 ? C8A FAD 501 B 1 
HETATM 15 N N7A FAD . . . F 2 -9.678 -14.204 -3.993 1 47.6 ? N7A FAD 501 B 1 
HETATM 16 C C5A FAD . . . F 2 -9.619 -13.027 -4.622 1 47.86 ? C5A FAD 501 B 1 
HETATM 17 C C6A FAD . . . F 2 -8.759 -11.824 -4.575 1 48.43 ? C6A FAD 501 B 1 
HETATM 18 N N6A FAD . . . F 2 -7.727 -11.732 -3.724 1 49.44 ? N6A FAD 501 B 1 
HETATM 19 N N1A FAD . . . F 2 -9.014 -10.803 -5.416 1 50.51 ? N1A FAD 501 B 1 
HETATM 20 C C2A FAD . . . F 2 -10.048 -10.859 -6.311 1 50.34 ? C2A FAD 501 B 1 
HETATM 21 N N3A FAD . . . F 2 -10.871 -11.921 -6.409 1 49.87 ? N3A FAD 501 B 1 
HETATM 22 C C4A FAD . . . F 2 -10.724 -13.019 -5.607 1 49.31 ? C4A FAD 501 B 1 
HETATM 23 N N1 FAD . . . F 2 -21.091 -18.959 0.948 1 44.52 ? N1 FAD 501 B 1 
HETATM 24 C C2 FAD . . . F 2 -21.974 -18.143 1.578 1 43.96 ? C2 FAD 501 B 1 
HETATM 25 O O2 FAD . . . F 2 -22.193 -17.011 1.089 1 42.3 ? O2 FAD 501 B 1 
HETATM 26 N N3 FAD . . . F 2 -22.606 -18.519 2.718 1 43.77 ? N3 FAD 501 B 1 
HETATM 27 C C4 FAD . . . F 2 -22.394 -19.727 3.29 1 44.99 ? C4 FAD 501 B 1 
HETATM 28 O O4 FAD . . . F 2 -22.956 -20.079 4.36 1 47.43 ? O4 FAD 501 B 1 
HETATM 29 C C4X FAD . . . F 2 -21.449 -20.66 2.651 1 45.64 ? C4X FAD 501 B 1 
HETATM 30 N N5 FAD . . . F 2 -21.199 -21.878 3.174 1 48.01 ? N5 FAD 501 B 1 
HETATM 31 C C5X FAD . . . F 2 -20.309 -22.73 2.572 1 49.48 ? C5X FAD 501 B 1 
HETATM 32 C C6 FAD . . . F 2 -20.058 -23.99 3.147 1 49.48 ? C6 FAD 501 B 1 
HETATM 33 C C7 FAD . . . F 2 -19.149 -24.865 2.546 1 51.69 ? C7 FAD 501 B 1 
HETATM 34 C C7M FAD . . . F 2 -18.906 -26.214 3.183 1 53.72 ? C7M FAD 501 B 1 
HETATM 35 C C8 FAD . . . F 2 -18.423 -24.456 1.292 1 51.93 ? C8 FAD 501 B 1 
HETATM 36 C C8M FAD . . . F 2 -17.444 -25.394 0.607 1 52.93 ? C8M FAD 501 B 1 
HETATM 37 C C9 FAD . . . F 2 -18.678 -23.201 0.723 1 49.87 ? C9 FAD 501 B 1 
HETATM 38 C C9A FAD . . . F 2 -19.593 -22.311 1.312 1 48.53 ? C9A FAD 501 B 1 
HETATM 39 N N10 FAD . . . F 2 -19.877 -21.021 0.754 1 47.36 ? N10 FAD 501 B 1 
HETATM 40 C C10 FAD . . . F 2 -20.802 -20.192 1.407 1 45.52 ? C10 FAD 501 B 1 
HETATM 41 C C1' FAD . . . F 2 -19.235 -20.521 -0.476 1 48.09 ? C1' FAD 501 B 1 
HETATM 42 C C2' FAD . . . F 2 -17.968 -19.778 -0.098 1 49.11 ? C2' FAD 501 B 1 
HETATM 43 O O2' FAD . . . F 2 -18.274 -18.988 1.068 1 48.32 ? O2' FAD 501 B 1 
HETATM 44 C C3' FAD . . . F 2 -17.554 -18.849 -1.218 1 48.38 ? C3' FAD 501 B 1 
HETATM 45 O O3' FAD . . . F 2 -17.467 -19.571 -2.447 1 53.93 ? O3' FAD 501 B 1 
HETATM 46 C C4' FAD . . . F 2 -16.212 -18.172 -0.972 1 47.2 ? C4' FAD 501 B 1 
HETATM 47 O O4' FAD . . . F 2 -16.112 -17.155 -1.981 1 47.06 ? O4' FAD 501 B 1 
HETATM 48 C C5' FAD . . . F 2 -15.023 -19.123 -1.105 1 45.62 ? C5' FAD 501 B 1 
HETATM 49 O O5' FAD . . . F 2 -13.858 -18.376 -0.793 1 43.42 ? O5' FAD 501 B 1 
HETATM 50 P P FAD . . . F 2 -12.435 -18.859 -1.336 1 46.03 ? P FAD 501 B 1 
HETATM 51 O O1P FAD . . . F 2 -11.367 -18.069 -0.651 1 46.48 ? O1P FAD 501 B 1 
HETATM 52 O O2P FAD . . . F 2 -12.273 -20.367 -1.333 1 47.99 ? O2P FAD 501 B 1 
HETATM 53 O O3P FAD . . . F 2 -12.441 -18.297 -2.873 1 46.48 ? O3P FAD 501 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           30 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           53 
#