data_5OEP # _model_server_result.job_id U-9sp4AKXSieKygnOaqoOQ _model_server_result.datetime_utc '2024-12-02 16:23:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oep # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 5OEP # _exptl.entry_id 5OEP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.52 _cell.angle_gamma 90 _cell.entry_id 5OEP _cell.length_a 78.3 _cell.length_b 84.54 _cell.length_c 80.97 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OEP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 304 n y N1 C5 IMD sing 305 n y N1 HN1 IMD sing 306 n n C2 N3 IMD doub 307 n y C2 H2 IMD sing 308 n n N3 C4 IMD sing 309 n y N3 HN3 IMD sing 310 n n C4 C5 IMD doub 311 n y C4 H4 IMD sing 312 n n C5 H5 IMD sing 313 n n # _atom_sites.entry_id 5OEP _atom_sites.fract_transf_matrix[1][1] 0.012771 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003071 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011829 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012702 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 900 FAD FAD . D 3 9T2 A 1 502 501 9T2 P98 . E 4 IMD A 1 503 1 IMD IMD . F 2 FAD B 1 501 900 FAD FAD . G 3 9T2 B 1 502 501 9T2 P98 . H 5 HOH A 1 601 46 HOH HOH . H 5 HOH A 2 602 28 HOH HOH . H 5 HOH A 3 603 45 HOH HOH . H 5 HOH A 4 604 40 HOH HOH . H 5 HOH A 5 605 39 HOH HOH . H 5 HOH A 6 606 61 HOH HOH . H 5 HOH A 7 607 14 HOH HOH . H 5 HOH A 8 608 6 HOH HOH . H 5 HOH A 9 609 27 HOH HOH . H 5 HOH A 10 610 25 HOH HOH . H 5 HOH A 11 611 43 HOH HOH . H 5 HOH A 12 612 42 HOH HOH . H 5 HOH A 13 613 34 HOH HOH . H 5 HOH A 14 614 26 HOH HOH . H 5 HOH A 15 615 35 HOH HOH . H 5 HOH A 16 616 21 HOH HOH . H 5 HOH A 17 617 7 HOH HOH . H 5 HOH A 18 618 32 HOH HOH . H 5 HOH A 19 619 41 HOH HOH . H 5 HOH A 20 620 56 HOH HOH . H 5 HOH A 21 621 3 HOH HOH . H 5 HOH A 22 622 57 HOH HOH . H 5 HOH A 23 623 18 HOH HOH . H 5 HOH A 24 624 58 HOH HOH . H 5 HOH A 25 625 52 HOH HOH . H 5 HOH A 26 626 23 HOH HOH . H 5 HOH A 27 627 37 HOH HOH . H 5 HOH A 28 628 31 HOH HOH . H 5 HOH A 29 629 44 HOH HOH . H 5 HOH A 30 630 22 HOH HOH . H 5 HOH A 31 631 33 HOH HOH . H 5 HOH A 32 632 5 HOH HOH . H 5 HOH A 33 633 17 HOH HOH . H 5 HOH A 34 634 59 HOH HOH . H 5 HOH A 35 635 47 HOH HOH . H 5 HOH A 36 636 62 HOH HOH . I 5 HOH B 1 601 49 HOH HOH . I 5 HOH B 2 602 19 HOH HOH . I 5 HOH B 3 603 24 HOH HOH . I 5 HOH B 4 604 8 HOH HOH . I 5 HOH B 5 605 51 HOH HOH . I 5 HOH B 6 606 1 HOH HOH . I 5 HOH B 7 607 11 HOH HOH . I 5 HOH B 8 608 4 HOH HOH . I 5 HOH B 9 609 16 HOH HOH . I 5 HOH B 10 610 2 HOH HOH . I 5 HOH B 11 611 54 HOH HOH . I 5 HOH B 12 612 9 HOH HOH . I 5 HOH B 13 613 12 HOH HOH . I 5 HOH B 14 614 53 HOH HOH . I 5 HOH B 15 615 30 HOH HOH . I 5 HOH B 16 616 60 HOH HOH . I 5 HOH B 17 617 55 HOH HOH . I 5 HOH B 18 618 48 HOH HOH . I 5 HOH B 19 619 50 HOH HOH . I 5 HOH B 20 620 10 HOH HOH . I 5 HOH B 21 621 13 HOH HOH . I 5 HOH B 22 622 15 HOH HOH . I 5 HOH B 23 623 36 HOH HOH . I 5 HOH B 24 624 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . E 4 -2.495 0.618 13.49 1 74.94 ? N1 IMD 503 A 1 HETATM 2 C C2 IMD . . . E 4 -3.815 0.685 13.801 1 75.1 ? C2 IMD 503 A 1 HETATM 3 N N3 IMD . . . E 4 -3.935 0.941 15.127 1 71.34 ? N3 IMD 503 A 1 HETATM 4 C C4 IMD . . . E 4 -2.691 1.038 15.645 1 70.61 ? C4 IMD 503 A 1 HETATM 5 C C5 IMD . . . E 4 -1.786 0.831 14.624 1 72.6 ? C5 IMD 503 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 434 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 5 #