data_5OEQ # _model_server_result.job_id 2JVtRNEJv5dyMSoq3NFnWA _model_server_result.datetime_utc '2024-11-15 04:05:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oeq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":900}' # _entry.id 5OEQ # _exptl.entry_id 5OEQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.67 _cell.angle_gamma 90 _cell.entry_id 5OEQ _cell.length_a 78.05 _cell.length_b 84.32 _cell.length_c 81.17 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OEQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 5OEQ _atom_sites.fract_transf_matrix[1][1] 0.012812 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003116 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01186 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012679 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 900 FAD FAD . D 3 P95 A 1 502 501 P95 P95 . E 4 IMD A 1 503 1 IMD IMD . F 2 FAD B 1 900 900 FAD FAD . G 5 HOH A 1 601 95 HOH HOH . G 5 HOH A 2 602 46 HOH HOH . G 5 HOH A 3 603 126 HOH HOH . G 5 HOH A 4 604 130 HOH HOH . G 5 HOH A 5 605 26 HOH HOH . G 5 HOH A 6 606 89 HOH HOH . G 5 HOH A 7 607 70 HOH HOH . G 5 HOH A 8 608 25 HOH HOH . G 5 HOH A 9 609 84 HOH HOH . G 5 HOH A 10 610 125 HOH HOH . G 5 HOH A 11 611 88 HOH HOH . G 5 HOH A 12 612 23 HOH HOH . G 5 HOH A 13 613 45 HOH HOH . G 5 HOH A 14 614 57 HOH HOH . G 5 HOH A 15 615 39 HOH HOH . G 5 HOH A 16 616 73 HOH HOH . G 5 HOH A 17 617 7 HOH HOH . G 5 HOH A 18 618 91 HOH HOH . G 5 HOH A 19 619 110 HOH HOH . G 5 HOH A 20 620 82 HOH HOH . G 5 HOH A 21 621 28 HOH HOH . G 5 HOH A 22 622 35 HOH HOH . G 5 HOH A 23 623 31 HOH HOH . G 5 HOH A 24 624 27 HOH HOH . G 5 HOH A 25 625 14 HOH HOH . G 5 HOH A 26 626 21 HOH HOH . G 5 HOH A 27 627 74 HOH HOH . G 5 HOH A 28 628 60 HOH HOH . G 5 HOH A 29 629 113 HOH HOH . G 5 HOH A 30 630 32 HOH HOH . G 5 HOH A 31 631 42 HOH HOH . G 5 HOH A 32 632 65 HOH HOH . G 5 HOH A 33 633 76 HOH HOH . G 5 HOH A 34 634 61 HOH HOH . G 5 HOH A 35 635 68 HOH HOH . G 5 HOH A 36 636 122 HOH HOH . G 5 HOH A 37 637 86 HOH HOH . G 5 HOH A 38 638 105 HOH HOH . G 5 HOH A 39 639 34 HOH HOH . G 5 HOH A 40 640 40 HOH HOH . G 5 HOH A 41 641 43 HOH HOH . G 5 HOH A 42 642 6 HOH HOH . G 5 HOH A 43 643 56 HOH HOH . G 5 HOH A 44 644 58 HOH HOH . G 5 HOH A 45 645 64 HOH HOH . G 5 HOH A 46 646 109 HOH HOH . G 5 HOH A 47 647 3 HOH HOH . G 5 HOH A 48 648 92 HOH HOH . G 5 HOH A 49 649 104 HOH HOH . G 5 HOH A 50 650 52 HOH HOH . G 5 HOH A 51 651 108 HOH HOH . G 5 HOH A 52 652 41 HOH HOH . G 5 HOH A 53 653 62 HOH HOH . G 5 HOH A 54 654 124 HOH HOH . G 5 HOH A 55 655 117 HOH HOH . G 5 HOH A 56 656 63 HOH HOH . G 5 HOH A 57 657 127 HOH HOH . G 5 HOH A 58 658 33 HOH HOH . G 5 HOH A 59 659 18 HOH HOH . G 5 HOH A 60 660 77 HOH HOH . G 5 HOH A 61 661 44 HOH HOH . G 5 HOH A 62 662 93 HOH HOH . G 5 HOH A 63 663 37 HOH HOH . G 5 HOH A 64 664 81 HOH HOH . G 5 HOH A 65 665 66 HOH HOH . G 5 HOH A 66 666 5 HOH HOH . G 5 HOH A 67 667 22 HOH HOH . G 5 HOH A 68 668 103 HOH HOH . G 5 HOH A 69 669 59 HOH HOH . G 5 HOH A 70 670 102 HOH HOH . G 5 HOH A 71 671 128 HOH HOH . G 5 HOH A 72 672 17 HOH HOH . H 5 HOH B 1 1001 129 HOH HOH . H 5 HOH B 2 1002 121 HOH HOH . H 5 HOH B 3 1003 11 HOH HOH . H 5 HOH B 4 1004 51 HOH HOH . H 5 HOH B 5 1005 8 HOH HOH . H 5 HOH B 6 1006 1 HOH HOH . H 5 HOH B 7 1007 49 HOH HOH . H 5 HOH B 8 1008 30 HOH HOH . H 5 HOH B 9 1009 78 HOH HOH . H 5 HOH B 10 1010 19 HOH HOH . H 5 HOH B 11 1011 80 HOH HOH . H 5 HOH B 12 1012 24 HOH HOH . H 5 HOH B 13 1013 16 HOH HOH . H 5 HOH B 14 1014 71 HOH HOH . H 5 HOH B 15 1015 54 HOH HOH . H 5 HOH B 16 1016 69 HOH HOH . H 5 HOH B 17 1017 94 HOH HOH . H 5 HOH B 18 1018 55 HOH HOH . H 5 HOH B 19 1019 114 HOH HOH . H 5 HOH B 20 1020 4 HOH HOH . H 5 HOH B 21 1021 53 HOH HOH . H 5 HOH B 22 1022 9 HOH HOH . H 5 HOH B 23 1023 2 HOH HOH . H 5 HOH B 24 1024 99 HOH HOH . H 5 HOH B 25 1025 120 HOH HOH . H 5 HOH B 26 1026 115 HOH HOH . H 5 HOH B 27 1027 75 HOH HOH . H 5 HOH B 28 1028 98 HOH HOH . H 5 HOH B 29 1029 48 HOH HOH . H 5 HOH B 30 1030 79 HOH HOH . H 5 HOH B 31 1031 96 HOH HOH . H 5 HOH B 32 1032 38 HOH HOH . H 5 HOH B 33 1033 83 HOH HOH . H 5 HOH B 34 1034 72 HOH HOH . H 5 HOH B 35 1035 119 HOH HOH . H 5 HOH B 36 1036 67 HOH HOH . H 5 HOH B 37 1037 10 HOH HOH . H 5 HOH B 38 1038 12 HOH HOH . H 5 HOH B 39 1039 118 HOH HOH . H 5 HOH B 40 1040 87 HOH HOH . H 5 HOH B 41 1041 97 HOH HOH . H 5 HOH B 42 1042 116 HOH HOH . H 5 HOH B 43 1043 100 HOH HOH . H 5 HOH B 44 1044 15 HOH HOH . H 5 HOH B 45 1045 85 HOH HOH . H 5 HOH B 46 1046 50 HOH HOH . H 5 HOH B 47 1047 107 HOH HOH . H 5 HOH B 48 1048 123 HOH HOH . H 5 HOH B 49 1049 101 HOH HOH . H 5 HOH B 50 1050 13 HOH HOH . H 5 HOH B 51 1051 36 HOH HOH . H 5 HOH B 52 1052 112 HOH HOH . H 5 HOH B 53 1053 111 HOH HOH . H 5 HOH B 54 1054 90 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . F 2 -12.303 -20.576 -4.15 1 44.5 ? PA FAD 900 B 1 HETATM 2 O O1A FAD . . . F 2 -13.358 -21.638 -4.185 1 44.38 ? O1A FAD 900 B 1 HETATM 3 O O2A FAD . . . F 2 -10.87 -20.943 -4.402 1 47.56 ? O2A FAD 900 B 1 HETATM 4 O O5B FAD . . . F 2 -12.588 -19.369 -5.116 1 44.07 ? O5B FAD 900 B 1 HETATM 5 C C5B FAD . . . F 2 -13.96 -18.949 -5.256 1 43.32 ? C5B FAD 900 B 1 HETATM 6 C C4B FAD . . . F 2 -14.052 -17.638 -6.023 1 43.05 ? C4B FAD 900 B 1 HETATM 7 O O4B FAD . . . F 2 -13.36 -16.627 -5.256 1 41.87 ? O4B FAD 900 B 1 HETATM 8 C C3B FAD . . . F 2 -13.394 -17.741 -7.401 1 45.12 ? C3B FAD 900 B 1 HETATM 9 O O3B FAD . . . F 2 -14.17 -16.999 -8.338 1 44.46 ? O3B FAD 900 B 1 HETATM 10 C C2B FAD . . . F 2 -12.079 -17.023 -7.19 1 46.23 ? C2B FAD 900 B 1 HETATM 11 O O2B FAD . . . F 2 -11.541 -16.446 -8.389 1 49.06 ? O2B FAD 900 B 1 HETATM 12 C C1B FAD . . . F 2 -12.422 -16 -6.124 1 44.26 ? C1B FAD 900 B 1 HETATM 13 N N9A FAD . . . F 2 -11.256 -15.581 -5.347 1 45.39 ? N9A FAD 900 B 1 HETATM 14 C C8A FAD . . . F 2 -10.585 -16.317 -4.433 1 44.75 ? C8A FAD 900 B 1 HETATM 15 N N7A FAD . . . F 2 -9.566 -15.599 -3.949 1 44.17 ? N7A FAD 900 B 1 HETATM 16 C C5A FAD . . . F 2 -9.551 -14.401 -4.529 1 44.31 ? C5A FAD 900 B 1 HETATM 17 C C6A FAD . . . F 2 -8.717 -13.191 -4.47 1 44.59 ? C6A FAD 900 B 1 HETATM 18 N N6A FAD . . . F 2 -7.679 -13.097 -3.624 1 44.71 ? N6A FAD 900 B 1 HETATM 19 N N1A FAD . . . F 2 -9.04 -12.153 -5.275 1 46.19 ? N1A FAD 900 B 1 HETATM 20 C C2A FAD . . . F 2 -10.091 -12.189 -6.141 1 46.3 ? C2A FAD 900 B 1 HETATM 21 N N3A FAD . . . F 2 -10.904 -13.269 -6.243 1 46.6 ? N3A FAD 900 B 1 HETATM 22 C C4A FAD . . . F 2 -10.681 -14.385 -5.471 1 45.89 ? C4A FAD 900 B 1 HETATM 23 N N1 FAD . . . F 2 -21.125 -20.294 1.024 1 38.51 ? N1 FAD 900 B 1 HETATM 24 C C2 FAD . . . F 2 -21.993 -19.495 1.687 1 37.05 ? C2 FAD 900 B 1 HETATM 25 O O2 FAD . . . F 2 -22.221 -18.358 1.217 1 36.31 ? O2 FAD 900 B 1 HETATM 26 N N3 FAD . . . F 2 -22.619 -19.904 2.81 1 37.57 ? N3 FAD 900 B 1 HETATM 27 C C4 FAD . . . F 2 -22.396 -21.125 3.35 1 39.48 ? C4 FAD 900 B 1 HETATM 28 O O4 FAD . . . F 2 -22.943 -21.511 4.406 1 40.87 ? O4 FAD 900 B 1 HETATM 29 C C4X FAD . . . F 2 -21.471 -22.04 2.669 1 40.76 ? C4X FAD 900 B 1 HETATM 30 N N5 FAD . . . F 2 -21.201 -23.266 3.161 1 43.53 ? N5 FAD 900 B 1 HETATM 31 C C5X FAD . . . F 2 -20.335 -24.106 2.541 1 43.99 ? C5X FAD 900 B 1 HETATM 32 C C6 FAD . . . F 2 -20.109 -25.373 3.096 1 44.8 ? C6 FAD 900 B 1 HETATM 33 C C7 FAD . . . F 2 -19.216 -26.249 2.485 1 46.67 ? C7 FAD 900 B 1 HETATM 34 C C7M FAD . . . F 2 -18.98 -27.613 3.11 1 49.41 ? C7M FAD 900 B 1 HETATM 35 C C8 FAD . . . F 2 -18.496 -25.82 1.237 1 46.78 ? C8 FAD 900 B 1 HETATM 36 C C8M FAD . . . F 2 -17.529 -26.752 0.537 1 48.77 ? C8M FAD 900 B 1 HETATM 37 C C9 FAD . . . F 2 -18.741 -24.554 0.684 1 44.86 ? C9 FAD 900 B 1 HETATM 38 C C9A FAD . . . F 2 -19.632 -23.662 1.288 1 43.22 ? C9A FAD 900 B 1 HETATM 39 N N10 FAD . . . F 2 -19.915 -22.356 0.767 1 42.28 ? N10 FAD 900 B 1 HETATM 40 C C10 FAD . . . F 2 -20.834 -21.539 1.44 1 39.74 ? C10 FAD 900 B 1 HETATM 41 C C1' FAD . . . F 2 -19.292 -21.812 -0.443 1 43.92 ? C1' FAD 900 B 1 HETATM 42 C C2' FAD . . . F 2 -17.966 -21.132 -0.066 1 45.4 ? C2' FAD 900 B 1 HETATM 43 O O2' FAD . . . F 2 -18.092 -20.378 1.159 1 42.62 ? O2' FAD 900 B 1 HETATM 44 C C3' FAD . . . F 2 -17.556 -20.156 -1.164 1 45.48 ? C3' FAD 900 B 1 HETATM 45 O O3' FAD . . . F 2 -17.54 -20.853 -2.408 1 48.24 ? O3' FAD 900 B 1 HETATM 46 C C4' FAD . . . F 2 -16.187 -19.501 -0.946 1 44.39 ? C4' FAD 900 B 1 HETATM 47 O O4' FAD . . . F 2 -16.132 -18.451 -1.922 1 44.07 ? O4' FAD 900 B 1 HETATM 48 C C5' FAD . . . F 2 -14.998 -20.472 -1.115 1 44.33 ? C5' FAD 900 B 1 HETATM 49 O O5' FAD . . . F 2 -13.783 -19.863 -0.628 1 41.47 ? O5' FAD 900 B 1 HETATM 50 P P FAD . . . F 2 -12.381 -20.231 -1.266 1 42.07 ? P FAD 900 B 1 HETATM 51 O O1P FAD . . . F 2 -11.343 -19.362 -0.617 1 45.15 ? O1P FAD 900 B 1 HETATM 52 O O2P FAD . . . F 2 -12.166 -21.702 -1.321 1 44.39 ? O2P FAD 900 B 1 HETATM 53 O O3P FAD . . . F 2 -12.479 -19.716 -2.793 1 44.11 ? O3P FAD 900 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #