data_5OGW
#
_model_server_result.job_id            Ux-Yh6ler8hXslwfAZ9cfw 
_model_server_result.datetime_utc      '2025-02-18 19:55:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ogw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":403}' 
#
_entry.id    5OGW 
#
_exptl.entry_id    5OGW 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              709.67 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Jasplakinolide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5OGW 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OGW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 M N N 
? 4 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 F O2B ADP . A ADP 401 1_555 G MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc2 F O3B ADP . A ADP 401 1_555 G MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? 
metalc ? metalc3 I O2B ADP . B ADP 401 1_555 J MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc4 I O3B ADP . B ADP 401 1_555 J MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? 
metalc ? metalc5 K O2B ADP . C ADP 401 1_555 L MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc6 K O3B ADP . C ADP 401 1_555 L MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? 
metalc ? metalc7 N O2B ADP . D ADP 401 1_555 O MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc8 N O3B ADP . D ADP 401 1_555 O MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? 
metalc ? metalc9 P O2B ADP . E ADP 401 1_555 Q MG MG . E MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc10 P O3B ADP . E ADP 401 1_555 Q MG MG . E MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? 
#
_chem_comp.formula           'C36 H45 Br N4 O6' 
_chem_comp.formula_weight    709.67 
_chem_comp.id                9UE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Jasplakinolide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C7 9UE doub 1 n n 
C5 C6 9UE sing 2 n n 
C5 C4 9UE sing 3 n n 
C C1 9UE sing 4 n n 
C19 N1 9UE sing 5 n n 
C6 C29 9UE sing 6 n n 
C6 N 9UE sing 7 n n 
O1 C4 9UE doub 8 n n 
C4 O 9UE sing 9 n n 
C34 C29 9UE doub 10 n y 
C34 C33 9UE sing 11 n y 
C7 N 9UE sing 12 n n 
C7 C8 9UE sing 13 n n 
BR C28 9UE sing 14 n n 
C1 C2 9UE sing 15 n n 
C1 C15 9UE sing 16 n n 
C29 C30 9UE sing 17 n y 
C20 C8 9UE sing 18 n n 
C20 C21 9UE sing 19 n n 
O C3 9UE sing 20 n n 
C33 C32 9UE doub 21 n y 
C3 C2 9UE sing 22 n n 
C3 C35 9UE sing 23 n n 
N1 C8 9UE sing 24 n n 
N1 C9 9UE sing 25 n n 
C10 C18 9UE sing 26 n n 
C10 C9 9UE sing 27 n n 
C10 N2 9UE sing 28 n n 
C17 C12 9UE sing 29 n n 
C15 C14 9UE doub 30 e n 
C9 O3 9UE doub 31 n n 
C30 C31 9UE doub 32 n y 
C32 C31 9UE sing 33 n y 
C32 O5 9UE sing 34 n n 
C28 C21 9UE doub 35 n y 
C28 N3 9UE sing 36 n y 
C21 C22 9UE sing 37 n y 
N2 C11 9UE sing 38 n n 
C11 O4 9UE doub 39 n n 
C11 C12 9UE sing 40 n n 
C14 C16 9UE sing 41 n n 
C14 C13 9UE sing 42 n n 
C12 C13 9UE sing 43 n n 
N3 C27 9UE sing 44 n y 
C22 C23 9UE doub 45 n y 
C22 C27 9UE sing 46 n y 
C23 C24 9UE sing 47 n y 
C27 C26 9UE doub 48 n y 
C24 C25 9UE doub 49 n y 
C26 C25 9UE sing 50 n y 
C35 H1 9UE sing 51 n n 
C35 H2 9UE sing 52 n n 
C35 H3 9UE sing 53 n n 
C34 H4 9UE sing 54 n n 
C33 H5 9UE sing 55 n n 
C31 H6 9UE sing 56 n n 
C30 H7 9UE sing 57 n n 
C26 H8 9UE sing 58 n n 
C25 H9 9UE sing 59 n n 
C24 H10 9UE sing 60 n n 
C1 H11 9UE sing 61 n n 
C2 H12 9UE sing 62 n n 
C2 H13 9UE sing 63 n n 
C3 H14 9UE sing 64 n n 
C5 H15 9UE sing 65 n n 
C5 H16 9UE sing 66 n n 
C6 H17 9UE sing 67 n n 
C23 H18 9UE sing 68 n n 
C20 H19 9UE sing 69 n n 
C20 H20 9UE sing 70 n n 
C19 H21 9UE sing 71 n n 
C19 H22 9UE sing 72 n n 
C19 H23 9UE sing 73 n n 
C18 H24 9UE sing 74 n n 
C18 H25 9UE sing 75 n n 
C18 H26 9UE sing 76 n n 
C17 H27 9UE sing 77 n n 
C17 H28 9UE sing 78 n n 
C17 H29 9UE sing 79 n n 
N3 H30 9UE sing 80 n n 
C16 H31 9UE sing 81 n n 
C16 H32 9UE sing 82 n n 
C16 H33 9UE sing 83 n n 
C15 H34 9UE sing 84 n n 
N2 H35 9UE sing 85 n n 
C13 H36 9UE sing 86 n n 
C13 H37 9UE sing 87 n n 
C12 H38 9UE sing 88 n n 
C10 H39 9UE sing 89 n n 
C8 H40 9UE sing 90 n n 
O5 H41 9UE sing 91 n n 
N H42 9UE sing 92 n n 
C H43 9UE sing 93 n n 
C H44 9UE sing 94 n n 
C H45 9UE sing 95 n n 
#
_atom_sites.entry_id                     5OGW 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 ADP A 1 401 379 ADP ADP . 
G 3 MG A 1 402 380 MG MG . 
H 4 9UE A 1 403 1 9UE JAS . 
I 2 ADP B 1 401 379 ADP ADP . 
J 3 MG B 1 402 380 MG MG . 
K 2 ADP C 1 401 379 ADP ADP . 
L 3 MG C 1 402 380 MG MG . 
M 4 9UE C 1 403 1 9UE JAS . 
N 2 ADP D 1 401 379 ADP ADP . 
O 3 MG D 1 402 380 MG MG . 
P 2 ADP E 1 401 379 ADP ADP . 
Q 3 MG E 1 402 380 MG MG . 
R 4 9UE E 1 403 1 9UE JAS . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C35 9UE . . . H 4 149.821 160.886 126.66 1 118.52 ? C35 9UE 403 A 1 
HETATM 2 C C34 9UE . . . H 4 143.286 159.538 125.211 1 114.34 ? C34 9UE 403 A 1 
HETATM 3 C C33 9UE . . . H 4 142.479 160.535 125.724 1 108.9 ? C33 9UE 403 A 1 
HETATM 4 C C32 9UE . . . H 4 142.991 161.429 126.648 1 113.38 ? C32 9UE 403 A 1 
HETATM 5 C C31 9UE . . . H 4 144.306 161.301 127.074 1 112.89 ? C31 9UE 403 A 1 
HETATM 6 C C30 9UE . . . H 4 145.093 160.274 126.583 1 115.24 ? C30 9UE 403 A 1 
HETATM 7 C C29 9UE . . . H 4 144.607 159.393 125.623 1 120.66 ? C29 9UE 403 A 1 
HETATM 8 C C28 9UE . . . H 4 143.883 151.43 126.753 1 161.34 ? C28 9UE 403 A 1 
HETATM 9 C C27 9UE . . . H 4 143.315 152.095 128.785 1 141.4 ? C27 9UE 403 A 1 
HETATM 10 C C26 9UE . . . H 4 142.852 152.182 130.09 1 143.55 ? C26 9UE 403 A 1 
HETATM 11 C C25 9UE . . . H 4 142.804 153.433 130.687 1 143.9 ? C25 9UE 403 A 1 
HETATM 12 C C24 9UE . . . H 4 143.242 154.562 130.006 1 131.01 ? C24 9UE 403 A 1 
HETATM 13 O O2 9UE . . . H 4 144.941 155.828 124.105 1 123.11 ? O2 9UE 403 A 1 
HETATM 14 C C1 9UE . . . H 4 151.168 157.385 125.459 1 118.67 ? C1 9UE 403 A 1 
HETATM 15 O O1 9UE . . . H 4 147.522 160.87 125.026 1 118.14 ? O1 9UE 403 A 1 
HETATM 16 C C2 9UE . . . H 4 150.903 158.638 126.313 1 127.01 ? C2 9UE 403 A 1 
HETATM 17 C C3 9UE . . . H 4 149.94 159.674 125.769 1 123.71 ? C3 9UE 403 A 1 
HETATM 18 O O3 9UE . . . H 4 146.911 152.61 127.3 1 125.69 ? O3 9UE 403 A 1 
HETATM 19 C C4 9UE . . . H 4 147.655 159.676 125.042 1 122.17 ? C4 9UE 403 A 1 
HETATM 20 C C5 9UE . . . H 4 146.795 158.708 124.282 1 125.59 ? C5 9UE 403 A 1 
HETATM 21 O O4 9UE . . . H 4 151.135 151.184 127.388 1 95.61 ? O4 9UE 403 A 1 
HETATM 22 C C6 9UE . . . H 4 145.453 158.309 124.969 1 123.37 ? C6 9UE 403 A 1 
HETATM 23 C C23 9UE . . . H 4 143.691 154.471 128.698 1 123 ? C23 9UE 403 A 1 
HETATM 24 C C22 9UE . . . H 4 143.739 153.23 128.069 1 130.02 ? C22 9UE 403 A 1 
HETATM 25 C C21 9UE . . . H 4 144.111 152.78 126.763 1 139.82 ? C21 9UE 403 A 1 
HETATM 26 C C20 9UE . . . H 4 144.643 153.645 125.656 1 130.43 ? C20 9UE 403 A 1 
HETATM 27 C C19 9UE . . . H 4 147.914 155.111 124.923 1 120.59 ? C19 9UE 403 A 1 
HETATM 28 C C18 9UE . . . H 4 148.68 150.905 125.981 1 108.59 ? C18 9UE 403 A 1 
HETATM 29 C C17 9UE . . . H 4 152.949 153.482 126.126 1 93.82 ? C17 9UE 403 A 1 
HETATM 30 N N3 9UE . . . H 4 143.415 150.994 127.953 1 154.27 ? N3 9UE 403 A 1 
HETATM 31 C C16 9UE . . . H 4 153.023 156.779 127.919 1 126.71 ? C16 9UE 403 A 1 
HETATM 32 C C15 9UE . . . H 4 151.211 156.158 126.333 1 118.64 ? C15 9UE 403 A 1 
HETATM 33 N N2 9UE . . . H 4 149.803 152.952 126.891 1 109.91 ? N2 9UE 403 A 1 
HETATM 34 C C14 9UE . . . H 4 151.968 155.853 127.387 1 116.93 ? C14 9UE 403 A 1 
HETATM 35 C C13 9UE . . . H 4 151.814 154.564 128.162 1 105.37 ? C13 9UE 403 A 1 
HETATM 36 C C12 9UE . . . H 4 152.204 153.257 127.446 1 95.91 ? C12 9UE 403 A 1 
HETATM 37 N N1 9UE . . . H 4 147.099 154.261 125.794 1 120.31 ? N1 9UE 403 A 1 
HETATM 38 C C11 9UE . . . H 4 150.981 152.388 127.21 1 100.16 ? C11 9UE 403 A 1 
HETATM 39 C C10 9UE . . . H 4 148.825 152.43 125.939 1 112.92 ? C10 9UE 403 A 1 
HETATM 40 C C9 9UE . . . H 4 147.504 153.093 126.353 1 118.29 ? C9 9UE 403 A 1 
HETATM 41 C C8 9UE . . . H 4 145.71 154.688 126.046 1 121.65 ? C8 9UE 403 A 1 
HETATM 42 C C7 9UE . . . H 4 145.393 155.941 125.242 1 116.69 ? C7 9UE 403 A 1 
HETATM 43 O O5 9UE . . . H 4 142.185 162.427 127.11 1 128.75 ? O5 9UE 403 A 1 
HETATM 44 BR BR 9UE . . . H 4 144.109 150.229 125.343 1 201.52 ? BR 9UE 403 A 1 
HETATM 45 N N 9UE . . . H 4 145.666 157.125 125.801 1 115.3 ? N 9UE 403 A 1 
HETATM 46 O O 9UE . . . H 4 148.62 159.04 125.718 1 122.6 ? O 9UE 403 A 1 
HETATM 47 C C 9UE . . . H 4 152.464 157.52 124.66 1 111.59 ? C 9UE 403 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           354 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           47 
#