data_5OH8 # _model_server_result.job_id w-L5R1e9dWwj_SMtjlAQ2w _model_server_result.datetime_utc '2024-10-19 09:26:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oh8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 5OH8 # _exptl.entry_id 5OH8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 275.343 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ROLIPRAM _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OH8 _cell.length_a 57.339 _cell.length_b 59.523 _cell.length_c 88.031 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OH8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,I 1 1 B,F,G,J 2 1 C,H,K 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 25 A CYS 24 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc2 A SG CYS 28 A CYS 27 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc3 A SG CYS 91 A CYS 90 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc4 A SG CYS 94 A CYS 93 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc5 B SG CYS 25 B CYS 24 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc6 B SG CYS 28 B CYS 27 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc7 B SG CYS 91 B CYS 90 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc8 B SG CYS 94 B CYS 93 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc9 C SG CYS 25 C CYS 24 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc10 C SG CYS 28 C CYS 27 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc11 C SG CYS 91 C CYS 90 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc12 C SG CYS 94 C CYS 93 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? # _chem_comp.formula 'C16 H21 N O3' _chem_comp.formula_weight 275.343 _chem_comp.id ROL _chem_comp.mon_nstd_flag . _chem_comp.name ROLIPRAM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (4R)-[3-(CYCLOPENTYLOXY)-4-METHOXYPHENYL]-2-PYRROLIDINONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C6 ROL doub 277 n y C5 C10 ROL sing 278 n y C5 C3 ROL sing 279 n n C6 C7 ROL sing 280 n y C6 H61 ROL sing 281 n n C7 C8 ROL doub 282 n y C7 O3 ROL sing 283 n n C8 C9 ROL sing 284 n y C8 O2 ROL sing 285 n n C9 C10 ROL doub 286 n y C9 H91 ROL sing 287 n n C10 H101 ROL sing 288 n n C3 C2 ROL sing 289 n n C3 C4 ROL sing 290 n n C3 H31 ROL sing 291 n n C2 C1 ROL sing 292 n n C2 H21 ROL sing 293 n n C2 H22 ROL sing 294 n n C1 O1 ROL doub 295 n n C1 N1 ROL sing 296 n n N1 C4 ROL sing 297 n n N1 H1 ROL sing 298 n n C4 H41 ROL sing 299 n n C4 H42 ROL sing 300 n n O3 C11 ROL sing 301 n n C11 C15 ROL sing 302 n n C11 C12 ROL sing 303 n n C11 H111 ROL sing 304 n n C15 C14 ROL sing 305 n n C15 H151 ROL sing 306 n n C15 H152 ROL sing 307 n n C14 C13 ROL sing 308 n n C14 H141 ROL sing 309 n n C14 H142 ROL sing 310 n n C13 C12 ROL sing 311 n n C13 H131 ROL sing 312 n n C13 H132 ROL sing 313 n n C12 H121 ROL sing 314 n n C12 H122 ROL sing 315 n n O2 C16 ROL sing 316 n n C16 H161 ROL sing 317 n n C16 H162 ROL sing 318 n n C16 H163 ROL sing 319 n n # _atom_sites.entry_id 5OH8 _atom_sites.fract_transf_matrix[1][1] 0.01744 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01136 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 201 150 ZN ZN . E 3 ROL A 1 202 151 ROL ROL . F 2 ZN B 1 201 150 ZN ZN . G 3 ROL B 1 202 151 ROL ROL . H 2 ZN C 1 201 150 ZN ZN . I 4 HOH A 1 301 4 HOH HOH . I 4 HOH A 2 302 16 HOH HOH . I 4 HOH A 3 303 26 HOH HOH . I 4 HOH A 4 304 53 HOH HOH . I 4 HOH A 5 305 22 HOH HOH . I 4 HOH A 6 306 13 HOH HOH . I 4 HOH A 7 307 19 HOH HOH . I 4 HOH A 8 308 12 HOH HOH . I 4 HOH A 9 309 36 HOH HOH . I 4 HOH A 10 310 25 HOH HOH . I 4 HOH A 11 311 35 HOH HOH . I 4 HOH A 12 312 27 HOH HOH . I 4 HOH A 13 313 3 HOH HOH . I 4 HOH A 14 314 29 HOH HOH . I 4 HOH A 15 315 23 HOH HOH . I 4 HOH A 16 316 17 HOH HOH . I 4 HOH A 17 317 34 HOH HOH . I 4 HOH A 18 318 43 HOH HOH . I 4 HOH A 19 319 1 HOH HOH . I 4 HOH A 20 320 18 HOH HOH . I 4 HOH A 21 321 46 HOH HOH . I 4 HOH A 22 322 41 HOH HOH . I 4 HOH A 23 323 39 HOH HOH . I 4 HOH A 24 324 9 HOH HOH . I 4 HOH A 25 325 33 HOH HOH . I 4 HOH A 26 326 28 HOH HOH . I 4 HOH A 27 327 31 HOH HOH . I 4 HOH A 28 328 2 HOH HOH . I 4 HOH A 29 329 45 HOH HOH . I 4 HOH A 30 330 37 HOH HOH . I 4 HOH A 31 331 24 HOH HOH . I 4 HOH A 32 332 38 HOH HOH . I 4 HOH A 33 333 11 HOH HOH . I 4 HOH A 34 334 47 HOH HOH . I 4 HOH A 35 335 40 HOH HOH . I 4 HOH A 36 336 32 HOH HOH . I 4 HOH A 37 337 42 HOH HOH . I 4 HOH A 38 338 20 HOH HOH . I 4 HOH A 39 339 14 HOH HOH . I 4 HOH A 40 340 8 HOH HOH . I 4 HOH A 41 341 79 HOH HOH . J 4 HOH B 1 301 10 HOH HOH . J 4 HOH B 2 302 69 HOH HOH . J 4 HOH B 3 303 48 HOH HOH . J 4 HOH B 4 304 73 HOH HOH . J 4 HOH B 5 305 54 HOH HOH . J 4 HOH B 6 306 58 HOH HOH . J 4 HOH B 7 307 70 HOH HOH . J 4 HOH B 8 308 71 HOH HOH . J 4 HOH B 9 309 50 HOH HOH . J 4 HOH B 10 310 55 HOH HOH . J 4 HOH B 11 311 72 HOH HOH . J 4 HOH B 12 312 62 HOH HOH . J 4 HOH B 13 313 76 HOH HOH . J 4 HOH B 14 314 65 HOH HOH . J 4 HOH B 15 315 61 HOH HOH . J 4 HOH B 16 316 66 HOH HOH . J 4 HOH B 17 317 44 HOH HOH . J 4 HOH B 18 318 67 HOH HOH . J 4 HOH B 19 319 51 HOH HOH . J 4 HOH B 20 320 56 HOH HOH . J 4 HOH B 21 321 74 HOH HOH . J 4 HOH B 22 322 52 HOH HOH . J 4 HOH B 23 323 15 HOH HOH . J 4 HOH B 24 324 75 HOH HOH . J 4 HOH B 25 325 49 HOH HOH . J 4 HOH B 26 326 59 HOH HOH . J 4 HOH B 27 327 64 HOH HOH . J 4 HOH B 28 328 63 HOH HOH . J 4 HOH B 29 329 78 HOH HOH . J 4 HOH B 30 330 6 HOH HOH . J 4 HOH B 31 331 77 HOH HOH . J 4 HOH B 32 332 57 HOH HOH . J 4 HOH B 33 333 60 HOH HOH . J 4 HOH B 34 334 68 HOH HOH . K 4 HOH C 1 301 82 HOH HOH . K 4 HOH C 2 302 30 HOH HOH . K 4 HOH C 3 303 21 HOH HOH . K 4 HOH C 4 304 80 HOH HOH . K 4 HOH C 5 305 7 HOH HOH . K 4 HOH C 6 306 5 HOH HOH . K 4 HOH C 7 307 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 ROL . . . E 3 25.841 18.746 -6.792 1 60.63 ? C5 ROL 202 A 1 HETATM 2 C C6 ROL . . . E 3 25.781 20.119 -7.134 1 69.4 ? C6 ROL 202 A 1 HETATM 3 C C7 ROL . . . E 3 26.742 21.014 -6.571 1 71.35 ? C7 ROL 202 A 1 HETATM 4 C C8 ROL . . . E 3 27.784 20.491 -5.609 1 71.67 ? C8 ROL 202 A 1 HETATM 5 C C9 ROL . . . E 3 27.773 19.142 -5.324 1 67.81 ? C9 ROL 202 A 1 HETATM 6 C C10 ROL . . . E 3 26.827 18.317 -5.885 1 69.43 ? C10 ROL 202 A 1 HETATM 7 C C3 ROL . . . E 3 24.972 17.6 -7.129 1 52.03 ? C3 ROL 202 A 1 HETATM 8 C C2 ROL . . . E 3 23.429 17.709 -7.024 1 44.47 ? C2 ROL 202 A 1 HETATM 9 C C1 ROL . . . E 3 23.026 16.355 -7.619 1 46.64 ? C1 ROL 202 A 1 HETATM 10 O O1 ROL . . . E 3 22.01 15.662 -7.38 1 40.6 ? O1 ROL 202 A 1 HETATM 11 N N1 ROL . . . E 3 24.005 15.977 -8.425 1 44.35 ? N1 ROL 202 A 1 HETATM 12 C C4 ROL . . . E 3 25.219 16.782 -8.393 1 54.52 ? C4 ROL 202 A 1 HETATM 13 O O3 ROL . . . E 3 26.752 22.358 -6.908 1 84.04 ? O3 ROL 202 A 1 HETATM 14 C C11 ROL . . . E 3 27.481 22.823 -8.07 1 88.46 ? C11 ROL 202 A 1 HETATM 15 C C15 ROL . . . E 3 26.691 23.796 -8.96 1 89.09 ? C15 ROL 202 A 1 HETATM 16 C C14 ROL . . . E 3 27.608 24.949 -9.349 1 92.78 ? C14 ROL 202 A 1 HETATM 17 C C13 ROL . . . E 3 28.93 24.749 -8.618 1 94.43 ? C13 ROL 202 A 1 HETATM 18 C C12 ROL . . . E 3 28.773 23.547 -7.686 1 91.95 ? C12 ROL 202 A 1 HETATM 19 O O2 ROL . . . E 3 28.765 21.266 -5.008 1 69.93 ? O2 ROL 202 A 1 HETATM 20 C C16 ROL . . . E 3 29.361 20.986 -3.734 1 67.36 ? C16 ROL 202 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #