data_5OHM # _model_server_result.job_id P3fb8vX7zGpEP9sYOI8dmA _model_server_result.datetime_utc '2024-11-13 02:23:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ohm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":201}' # _entry.id 5OHM # _exptl.entry_id 5OHM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 1529.829 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POLYETHYLENE GLYCOL (N=34)' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.44 _cell.angle_gamma 90 _cell.entry_id 5OHM _cell.length_a 55.866 _cell.length_b 149.604 _cell.length_c 73.788 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OHM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 PISA tetrameric 4 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,J 1 1 C,D,H,K,M 2 1 E,F,I,L,N 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 N N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id L _struct_conn.ptnr1_label_atom_id OE1 _struct_conn.ptnr1_label_comp_id GLU _struct_conn.ptnr1_label_seq_id 96 _struct_conn.ptnr1_auth_asym_id J _struct_conn.ptnr1_auth_comp_id GLU _struct_conn.ptnr1_auth_seq_id 114 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id N _struct_conn.ptnr2_label_atom_id C41 _struct_conn.ptnr2_label_comp_id 15P _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id J _struct_conn.ptnr2_auth_comp_id 15P _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.374 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C69 H140 O35' _chem_comp.formula_weight 1529.829 _chem_comp.id 15P _chem_comp.mon_nstd_flag . _chem_comp.name 'POLYETHYLENE GLYCOL (N=34)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'PEG 1500' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OXT C1 15P sing 1 n n OXT HXT 15P sing 2 n n C1 C2 15P sing 3 n n C1 H11 15P sing 4 n n C1 H21 15P sing 5 n n C2 O1 15P sing 6 n n C2 H12 15P sing 7 n n C2 H22 15P sing 8 n n O1 C3 15P sing 9 n n C3 C4 15P sing 10 n n C3 H13 15P sing 11 n n C3 H23 15P sing 12 n n C4 O2 15P sing 13 n n C4 H14 15P sing 14 n n C4 H24 15P sing 15 n n O2 C5 15P sing 16 n n C5 C6 15P sing 17 n n C5 H15 15P sing 18 n n C5 H25 15P sing 19 n n C6 O3 15P sing 20 n n C6 H16 15P sing 21 n n C6 H26 15P sing 22 n n O3 C7 15P sing 23 n n C7 C8 15P sing 24 n n C7 H17 15P sing 25 n n C7 H27 15P sing 26 n n C8 O4 15P sing 27 n n C8 H18 15P sing 28 n n C8 H28 15P sing 29 n n O4 C9 15P sing 30 n n C9 C10 15P sing 31 n n C9 H19 15P sing 32 n n C9 H29 15P sing 33 n n C10 O5 15P sing 34 n n C10 H101 15P sing 35 n n C10 H102 15P sing 36 n n O5 C11 15P sing 37 n n C11 C12 15P sing 38 n n C11 H111 15P sing 39 n n C11 H112 15P sing 40 n n C12 O6 15P sing 41 n n C12 H121 15P sing 42 n n C12 H122 15P sing 43 n n O6 C13 15P sing 44 n n C13 C14 15P sing 45 n n C13 H131 15P sing 46 n n C13 H132 15P sing 47 n n C14 O7 15P sing 48 n n C14 H141 15P sing 49 n n C14 H142 15P sing 50 n n O7 C15 15P sing 51 n n C15 C16 15P sing 52 n n C15 H151 15P sing 53 n n C15 H152 15P sing 54 n n C16 O8 15P sing 55 n n C16 H161 15P sing 56 n n C16 H162 15P sing 57 n n O8 C17 15P sing 58 n n C17 C18 15P sing 59 n n C17 H171 15P sing 60 n n C17 H172 15P sing 61 n n C18 O9 15P sing 62 n n C18 H181 15P sing 63 n n C18 H182 15P sing 64 n n O9 C19 15P sing 65 n n C19 C20 15P sing 66 n n C19 H191 15P sing 67 n n C19 H192 15P sing 68 n n C20 O10 15P sing 69 n n C20 H201 15P sing 70 n n C20 H202 15P sing 71 n n O10 C21 15P sing 72 n n C21 C22 15P sing 73 n n C21 H211 15P sing 74 n n C21 H212 15P sing 75 n n C22 O11 15P sing 76 n n C22 H221 15P sing 77 n n C22 H222 15P sing 78 n n O11 C23 15P sing 79 n n C23 C24 15P sing 80 n n C23 H231 15P sing 81 n n C23 H232 15P sing 82 n n C24 O12 15P sing 83 n n C24 H241 15P sing 84 n n C24 H242 15P sing 85 n n O12 C25 15P sing 86 n n C25 C26 15P sing 87 n n C25 H251 15P sing 88 n n C25 H252 15P sing 89 n n C26 O13 15P sing 90 n n C26 H261 15P sing 91 n n C26 H262 15P sing 92 n n O13 C27 15P sing 93 n n C27 C28 15P sing 94 n n C27 H271 15P sing 95 n n C27 H272 15P sing 96 n n C28 O14 15P sing 97 n n C28 H281 15P sing 98 n n C28 H282 15P sing 99 n n O14 C29 15P sing 100 n n C29 C30 15P sing 101 n n C29 H291 15P sing 102 n n C29 H292 15P sing 103 n n C30 O15 15P sing 104 n n C30 H301 15P sing 105 n n C30 H302 15P sing 106 n n O15 C31 15P sing 107 n n C31 C32 15P sing 108 n n C31 H311 15P sing 109 n n C31 H312 15P sing 110 n n C32 O16 15P sing 111 n n C32 H321 15P sing 112 n n C32 H322 15P sing 113 n n O16 C33 15P sing 114 n n C33 C34 15P sing 115 n n C33 H331 15P sing 116 n n C33 H332 15P sing 117 n n C34 O17 15P sing 118 n n C34 H341 15P sing 119 n n C34 H342 15P sing 120 n n O17 C35 15P sing 121 n n C35 C36 15P sing 122 n n C35 H351 15P sing 123 n n C35 H352 15P sing 124 n n C36 O18 15P sing 125 n n C36 H361 15P sing 126 n n C36 H362 15P sing 127 n n O18 C37 15P sing 128 n n C37 C38 15P sing 129 n n C37 H371 15P sing 130 n n C37 H372 15P sing 131 n n C38 O19 15P sing 132 n n C38 H381 15P sing 133 n n C38 H382 15P sing 134 n n O19 C39 15P sing 135 n n C39 C40 15P sing 136 n n C39 H391 15P sing 137 n n C39 H392 15P sing 138 n n C40 O20 15P sing 139 n n C40 H401 15P sing 140 n n C40 H402 15P sing 141 n n O20 C41 15P sing 142 n n C41 C42 15P sing 143 n n C41 H411 15P sing 144 n n C41 H412 15P sing 145 n n C42 O21 15P sing 146 n n C42 H421 15P sing 147 n n C42 H422 15P sing 148 n n O21 C43 15P sing 149 n n C43 C44 15P sing 150 n n C43 H431 15P sing 151 n n C43 H432 15P sing 152 n n C44 O22 15P sing 153 n n C44 H441 15P sing 154 n n C44 H442 15P sing 155 n n O22 C45 15P sing 156 n n C45 C46 15P sing 157 n n C45 H451 15P sing 158 n n C45 H452 15P sing 159 n n C46 O23 15P sing 160 n n C46 H461 15P sing 161 n n C46 H462 15P sing 162 n n O23 C47 15P sing 163 n n C47 C48 15P sing 164 n n C47 H471 15P sing 165 n n C47 H472 15P sing 166 n n C48 O24 15P sing 167 n n C48 H481 15P sing 168 n n C48 H482 15P sing 169 n n O24 C49 15P sing 170 n n C49 C50 15P sing 171 n n C49 H491 15P sing 172 n n C49 H492 15P sing 173 n n C50 O25 15P sing 174 n n C50 H501 15P sing 175 n n C50 H502 15P sing 176 n n O25 C51 15P sing 177 n n C51 C52 15P sing 178 n n C51 H511 15P sing 179 n n C51 H512 15P sing 180 n n C52 O26 15P sing 181 n n C52 H521 15P sing 182 n n C52 H522 15P sing 183 n n O26 C53 15P sing 184 n n C53 C54 15P sing 185 n n C53 H531 15P sing 186 n n C53 H532 15P sing 187 n n C54 O27 15P sing 188 n n C54 H541 15P sing 189 n n C54 H542 15P sing 190 n n O27 C55 15P sing 191 n n C55 C56 15P sing 192 n n C55 H551 15P sing 193 n n C55 H552 15P sing 194 n n C56 O28 15P sing 195 n n C56 H561 15P sing 196 n n C56 H562 15P sing 197 n n O28 C57 15P sing 198 n n C57 C58 15P sing 199 n n C57 H571 15P sing 200 n n C57 H572 15P sing 201 n n C58 O29 15P sing 202 n n C58 H581 15P sing 203 n n C58 H582 15P sing 204 n n O29 C59 15P sing 205 n n C59 C60 15P sing 206 n n C59 H591 15P sing 207 n n C59 H592 15P sing 208 n n C60 O30 15P sing 209 n n C60 H601 15P sing 210 n n C60 H602 15P sing 211 n n O30 C61 15P sing 212 n n C61 C62 15P sing 213 n n C61 H611 15P sing 214 n n C61 H612 15P sing 215 n n C62 O31 15P sing 216 n n C62 H621 15P sing 217 n n C62 H622 15P sing 218 n n O31 C63 15P sing 219 n n C63 C64 15P sing 220 n n C63 H631 15P sing 221 n n C63 H632 15P sing 222 n n C64 O32 15P sing 223 n n C64 H641 15P sing 224 n n C64 H642 15P sing 225 n n O32 C65 15P sing 226 n n C65 C66 15P sing 227 n n C65 H651 15P sing 228 n n C65 H652 15P sing 229 n n C66 O33 15P sing 230 n n C66 H661 15P sing 231 n n C66 H662 15P sing 232 n n O33 C67 15P sing 233 n n C67 C68 15P sing 234 n n C67 H671 15P sing 235 n n C67 H672 15P sing 236 n n C68 O34 15P sing 237 n n C68 H681 15P sing 238 n n C68 H682 15P sing 239 n n O34 CM 15P sing 240 n n CM HCM1 15P sing 241 n n CM HCM2 15P sing 242 n n CM HCM3 15P sing 243 n n # _atom_sites.entry_id 5OHM _atom_sites.fract_transf_matrix[1][1] 0.0179 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006669 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006684 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014462 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 15P H 1 201 2 15P 15P . N 3 15P J 1 201 1 15P 15P . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O15 15P . . . N 3 -69.659 8.077 5.954 1 76.49 ? O15 15P 201 J 1 HETATM 2 C C31 15P . . . N 3 -69.791 9.463 5.781 1 79.81 ? C31 15P 201 J 1 HETATM 3 C C32 15P . . . N 3 -69.523 9.823 4.316 1 77.68 ? C32 15P 201 J 1 HETATM 4 O O16 15P . . . N 3 -68.145 9.95 4.09 1 78.57 ? O16 15P 201 J 1 HETATM 5 C C33 15P . . . N 3 -67.501 8.774 3.691 1 80.34 ? C33 15P 201 J 1 HETATM 6 C C34 15P . . . N 3 -66.536 8.379 4.809 1 88.18 ? C34 15P 201 J 1 HETATM 7 O O17 15P . . . N 3 -65.336 9.065 4.617 1 87.9 ? O17 15P 201 J 1 HETATM 8 C C35 15P . . . N 3 -64.566 8.514 3.587 1 96.97 ? C35 15P 201 J 1 HETATM 9 C C36 15P . . . N 3 -63.087 8.754 3.876 1 99.59 ? C36 15P 201 J 1 HETATM 10 O O18 15P . . . N 3 -62.429 7.525 3.754 1 88.99 ? O18 15P 201 J 1 HETATM 11 C C37 15P . . . N 3 -61.533 7.455 2.682 1 83.73 ? C37 15P 201 J 1 HETATM 12 C C38 15P . . . N 3 -60.171 7.971 3.149 1 80.63 ? C38 15P 201 J 1 HETATM 13 O O19 15P . . . N 3 -60.006 7.645 4.5 1 75.49 ? O19 15P 201 J 1 HETATM 14 C C39 15P . . . N 3 -59.092 6.617 4.762 1 86.69 ? C39 15P 201 J 1 HETATM 15 C C40 15P . . . N 3 -59.362 6.129 6.182 1 92.23 ? C40 15P 201 J 1 HETATM 16 O O20 15P . . . N 3 -59.27 7.222 7.054 1 80 ? O20 15P 201 J 1 HETATM 17 C C41 15P . . . N 3 -58.086 7.255 7.804 1 74.97 ? C41 15P 201 J 1 HETATM 18 C C42 15P . . . N 3 -58.276 6.435 9.085 1 44.23 ? C42 15P 201 J 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 18 #