data_5OJ1 # _model_server_result.job_id zrWmceE07TFgAvDe5a4Lvg _model_server_result.datetime_utc '2024-11-24 13:37:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oj1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 5OJ1 # _exptl.entry_id 5OJ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5OJ1 _cell.length_a 100.839 _cell.length_b 100.839 _cell.length_c 189.354 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OJ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 289 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 337 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C _struct_conn.ptnr2_label_comp_id 1S6 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 1S6 _struct_conn.ptnr2_auth_seq_id 801 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.462 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5OJ1 _atom_sites.fract_transf_matrix[1][1] 0.009917 _atom_sites.fract_transf_matrix[1][2] 0.005725 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011451 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1S6 A 1 801 1337 1S6 SOY . C 3 NA A 1 802 1 NA NA . D 4 HOH A 1 901 6 HOH HOH . D 4 HOH A 2 902 45 HOH HOH . D 4 HOH A 3 903 46 HOH HOH . D 4 HOH A 4 904 9 HOH HOH . D 4 HOH A 5 905 34 HOH HOH . D 4 HOH A 6 906 8 HOH HOH . D 4 HOH A 7 907 10 HOH HOH . D 4 HOH A 8 908 40 HOH HOH . D 4 HOH A 9 909 25 HOH HOH . D 4 HOH A 10 910 24 HOH HOH . D 4 HOH A 11 911 26 HOH HOH . D 4 HOH A 12 912 28 HOH HOH . D 4 HOH A 13 913 11 HOH HOH . D 4 HOH A 14 914 27 HOH HOH . D 4 HOH A 15 915 1 HOH HOH . D 4 HOH A 16 916 39 HOH HOH . D 4 HOH A 17 917 5 HOH HOH . D 4 HOH A 18 918 15 HOH HOH . D 4 HOH A 19 919 29 HOH HOH . D 4 HOH A 20 920 19 HOH HOH . D 4 HOH A 21 921 36 HOH HOH . D 4 HOH A 22 922 7 HOH HOH . D 4 HOH A 23 923 37 HOH HOH . D 4 HOH A 24 924 13 HOH HOH . D 4 HOH A 25 925 3 HOH HOH . D 4 HOH A 26 926 14 HOH HOH . D 4 HOH A 27 927 18 HOH HOH . D 4 HOH A 28 928 22 HOH HOH . D 4 HOH A 29 929 38 HOH HOH . D 4 HOH A 30 930 44 HOH HOH . D 4 HOH A 31 931 16 HOH HOH . D 4 HOH A 32 932 35 HOH HOH . D 4 HOH A 33 933 23 HOH HOH . D 4 HOH A 34 934 43 HOH HOH . D 4 HOH A 35 935 42 HOH HOH . D 4 HOH A 36 936 12 HOH HOH . D 4 HOH A 37 937 4 HOH HOH . D 4 HOH A 38 938 17 HOH HOH . D 4 HOH A 39 939 20 HOH HOH . D 4 HOH A 40 940 21 HOH HOH . D 4 HOH A 41 941 33 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 41.043 _atom_site.Cartn_y -26.232 _atom_site.Cartn_z 51.158 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.88 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 802 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #