data_5OJ7 # _model_server_result.job_id UZpqNFxHj4kOYkHFl1OVjg _model_server_result.datetime_utc '2024-10-19 05:21:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oj7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 5OJ7 # _exptl.entry_id 5OJ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OJ7 _cell.length_a 69.39 _cell.length_b 74.66 _cell.length_c 109.7 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OJ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 125 A CYS 154 1_555 A SG CYS 125 A CYS 154 3_655 ? B ? ? B ? ? ? ? ? ? ? 2.409 ? metalc ? metalc1 A SG CYS 139 A CYS 168 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc2 A SG CYS 142 A CYS 171 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc3 A SG CYS 190 A CYS 219 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc4 A SG CYS 193 A CYS 222 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 145 n n C1 C2 EDO sing 146 n n C1 H11 EDO sing 147 n n C1 H12 EDO sing 148 n n O1 HO1 EDO sing 149 n n C2 O2 EDO sing 150 n n C2 H21 EDO sing 151 n n C2 H22 EDO sing 152 n n O2 HO2 EDO sing 153 n n # _atom_sites.entry_id 5OJ7 _atom_sites.fract_transf_matrix[1][1] 0.014411 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013394 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009116 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AR6 A 1 401 1 AR6 AR6 . C 3 ZN A 1 402 1 ZN ZN . D 4 EDO A 1 403 2 EDO EDO . E 4 EDO A 1 404 3 EDO EDO . F 4 EDO A 1 405 5 EDO EDO . G 4 EDO A 1 406 6 EDO EDO . H 5 GOL A 1 407 1 GOL GOL . I 6 HOH A 1 501 120 HOH HOH . I 6 HOH A 2 502 67 HOH HOH . I 6 HOH A 3 503 115 HOH HOH . I 6 HOH A 4 504 152 HOH HOH . I 6 HOH A 5 505 148 HOH HOH . I 6 HOH A 6 506 68 HOH HOH . I 6 HOH A 7 507 107 HOH HOH . I 6 HOH A 8 508 72 HOH HOH . I 6 HOH A 9 509 230 HOH HOH . I 6 HOH A 10 510 94 HOH HOH . I 6 HOH A 11 511 87 HOH HOH . I 6 HOH A 12 512 104 HOH HOH . I 6 HOH A 13 513 19 HOH HOH . I 6 HOH A 14 514 136 HOH HOH . I 6 HOH A 15 515 58 HOH HOH . I 6 HOH A 16 516 191 HOH HOH . I 6 HOH A 17 517 193 HOH HOH . I 6 HOH A 18 518 34 HOH HOH . I 6 HOH A 19 519 101 HOH HOH . I 6 HOH A 20 520 228 HOH HOH . I 6 HOH A 21 521 203 HOH HOH . I 6 HOH A 22 522 205 HOH HOH . I 6 HOH A 23 523 179 HOH HOH . I 6 HOH A 24 524 112 HOH HOH . I 6 HOH A 25 525 99 HOH HOH . I 6 HOH A 26 526 260 HOH HOH . I 6 HOH A 27 527 128 HOH HOH . I 6 HOH A 28 528 184 HOH HOH . I 6 HOH A 29 529 181 HOH HOH . I 6 HOH A 30 530 223 HOH HOH . I 6 HOH A 31 531 76 HOH HOH . I 6 HOH A 32 532 82 HOH HOH . I 6 HOH A 33 533 180 HOH HOH . I 6 HOH A 34 534 31 HOH HOH . I 6 HOH A 35 535 15 HOH HOH . I 6 HOH A 36 536 75 HOH HOH . I 6 HOH A 37 537 60 HOH HOH . I 6 HOH A 38 538 151 HOH HOH . I 6 HOH A 39 539 140 HOH HOH . I 6 HOH A 40 540 159 HOH HOH . I 6 HOH A 41 541 213 HOH HOH . I 6 HOH A 42 542 44 HOH HOH . I 6 HOH A 43 543 90 HOH HOH . I 6 HOH A 44 544 200 HOH HOH . I 6 HOH A 45 545 3 HOH HOH . I 6 HOH A 46 546 27 HOH HOH . I 6 HOH A 47 547 192 HOH HOH . I 6 HOH A 48 548 111 HOH HOH . I 6 HOH A 49 549 53 HOH HOH . I 6 HOH A 50 550 17 HOH HOH . I 6 HOH A 51 551 154 HOH HOH . I 6 HOH A 52 552 89 HOH HOH . I 6 HOH A 53 553 161 HOH HOH . I 6 HOH A 54 554 189 HOH HOH . I 6 HOH A 55 555 158 HOH HOH . I 6 HOH A 56 556 132 HOH HOH . I 6 HOH A 57 557 1 HOH HOH . I 6 HOH A 58 558 137 HOH HOH . I 6 HOH A 59 559 176 HOH HOH . I 6 HOH A 60 560 198 HOH HOH . I 6 HOH A 61 561 109 HOH HOH . I 6 HOH A 62 562 9 HOH HOH . I 6 HOH A 63 563 41 HOH HOH . I 6 HOH A 64 564 59 HOH HOH . I 6 HOH A 65 565 5 HOH HOH . I 6 HOH A 66 566 100 HOH HOH . I 6 HOH A 67 567 153 HOH HOH . I 6 HOH A 68 568 116 HOH HOH . I 6 HOH A 69 569 174 HOH HOH . I 6 HOH A 70 570 257 HOH HOH . I 6 HOH A 71 571 56 HOH HOH . I 6 HOH A 72 572 113 HOH HOH . I 6 HOH A 73 573 168 HOH HOH . I 6 HOH A 74 574 18 HOH HOH . I 6 HOH A 75 575 73 HOH HOH . I 6 HOH A 76 576 32 HOH HOH . I 6 HOH A 77 577 187 HOH HOH . I 6 HOH A 78 578 124 HOH HOH . I 6 HOH A 79 579 215 HOH HOH . I 6 HOH A 80 580 46 HOH HOH . I 6 HOH A 81 581 119 HOH HOH . I 6 HOH A 82 582 36 HOH HOH . I 6 HOH A 83 583 61 HOH HOH . I 6 HOH A 84 584 92 HOH HOH . I 6 HOH A 85 585 117 HOH HOH . I 6 HOH A 86 586 123 HOH HOH . I 6 HOH A 87 587 14 HOH HOH . I 6 HOH A 88 588 172 HOH HOH . I 6 HOH A 89 589 122 HOH HOH . I 6 HOH A 90 590 10 HOH HOH . I 6 HOH A 91 591 11 HOH HOH . I 6 HOH A 92 592 39 HOH HOH . I 6 HOH A 93 593 30 HOH HOH . I 6 HOH A 94 594 16 HOH HOH . I 6 HOH A 95 595 55 HOH HOH . I 6 HOH A 96 596 50 HOH HOH . I 6 HOH A 97 597 21 HOH HOH . I 6 HOH A 98 598 51 HOH HOH . I 6 HOH A 99 599 196 HOH HOH . I 6 HOH A 100 600 91 HOH HOH . I 6 HOH A 101 601 163 HOH HOH . I 6 HOH A 102 602 43 HOH HOH . I 6 HOH A 103 603 28 HOH HOH . I 6 HOH A 104 604 54 HOH HOH . I 6 HOH A 105 605 7 HOH HOH . I 6 HOH A 106 606 102 HOH HOH . I 6 HOH A 107 607 208 HOH HOH . I 6 HOH A 108 608 45 HOH HOH . I 6 HOH A 109 609 134 HOH HOH . I 6 HOH A 110 610 79 HOH HOH . I 6 HOH A 111 611 118 HOH HOH . I 6 HOH A 112 612 261 HOH HOH . I 6 HOH A 113 613 83 HOH HOH . I 6 HOH A 114 614 38 HOH HOH . I 6 HOH A 115 615 23 HOH HOH . I 6 HOH A 116 616 177 HOH HOH . I 6 HOH A 117 617 2 HOH HOH . I 6 HOH A 118 618 143 HOH HOH . I 6 HOH A 119 619 157 HOH HOH . I 6 HOH A 120 620 108 HOH HOH . I 6 HOH A 121 621 207 HOH HOH . I 6 HOH A 122 622 138 HOH HOH . I 6 HOH A 123 623 93 HOH HOH . I 6 HOH A 124 624 95 HOH HOH . I 6 HOH A 125 625 20 HOH HOH . I 6 HOH A 126 626 170 HOH HOH . I 6 HOH A 127 627 219 HOH HOH . I 6 HOH A 128 628 80 HOH HOH . I 6 HOH A 129 629 206 HOH HOH . I 6 HOH A 130 630 74 HOH HOH . I 6 HOH A 131 631 22 HOH HOH . I 6 HOH A 132 632 35 HOH HOH . I 6 HOH A 133 633 49 HOH HOH . I 6 HOH A 134 634 130 HOH HOH . I 6 HOH A 135 635 141 HOH HOH . I 6 HOH A 136 636 214 HOH HOH . I 6 HOH A 137 637 26 HOH HOH . I 6 HOH A 138 638 186 HOH HOH . I 6 HOH A 139 639 160 HOH HOH . I 6 HOH A 140 640 255 HOH HOH . I 6 HOH A 141 641 150 HOH HOH . I 6 HOH A 142 642 86 HOH HOH . I 6 HOH A 143 643 88 HOH HOH . I 6 HOH A 144 644 212 HOH HOH . I 6 HOH A 145 645 188 HOH HOH . I 6 HOH A 146 646 139 HOH HOH . I 6 HOH A 147 647 239 HOH HOH . I 6 HOH A 148 648 110 HOH HOH . I 6 HOH A 149 649 33 HOH HOH . I 6 HOH A 150 650 147 HOH HOH . I 6 HOH A 151 651 178 HOH HOH . I 6 HOH A 152 652 185 HOH HOH . I 6 HOH A 153 653 69 HOH HOH . I 6 HOH A 154 654 24 HOH HOH . I 6 HOH A 155 655 66 HOH HOH . I 6 HOH A 156 656 62 HOH HOH . I 6 HOH A 157 657 259 HOH HOH . I 6 HOH A 158 658 47 HOH HOH . I 6 HOH A 159 659 173 HOH HOH . I 6 HOH A 160 660 64 HOH HOH . I 6 HOH A 161 661 105 HOH HOH . I 6 HOH A 162 662 210 HOH HOH . I 6 HOH A 163 663 40 HOH HOH . I 6 HOH A 164 664 8 HOH HOH . I 6 HOH A 165 665 175 HOH HOH . I 6 HOH A 166 666 4 HOH HOH . I 6 HOH A 167 667 81 HOH HOH . I 6 HOH A 168 668 42 HOH HOH . I 6 HOH A 169 669 114 HOH HOH . I 6 HOH A 170 670 156 HOH HOH . I 6 HOH A 171 671 242 HOH HOH . I 6 HOH A 172 672 12 HOH HOH . I 6 HOH A 173 673 48 HOH HOH . I 6 HOH A 174 674 29 HOH HOH . I 6 HOH A 175 675 6 HOH HOH . I 6 HOH A 176 676 194 HOH HOH . I 6 HOH A 177 677 52 HOH HOH . I 6 HOH A 178 678 25 HOH HOH . I 6 HOH A 179 679 84 HOH HOH . I 6 HOH A 180 680 169 HOH HOH . I 6 HOH A 181 681 190 HOH HOH . I 6 HOH A 182 682 246 HOH HOH . I 6 HOH A 183 683 199 HOH HOH . I 6 HOH A 184 684 127 HOH HOH . I 6 HOH A 185 685 98 HOH HOH . I 6 HOH A 186 686 71 HOH HOH . I 6 HOH A 187 687 146 HOH HOH . I 6 HOH A 188 688 195 HOH HOH . I 6 HOH A 189 689 247 HOH HOH . I 6 HOH A 190 690 226 HOH HOH . I 6 HOH A 191 691 135 HOH HOH . I 6 HOH A 192 692 37 HOH HOH . I 6 HOH A 193 693 142 HOH HOH . I 6 HOH A 194 694 155 HOH HOH . I 6 HOH A 195 695 103 HOH HOH . I 6 HOH A 196 696 197 HOH HOH . I 6 HOH A 197 697 70 HOH HOH . I 6 HOH A 198 698 202 HOH HOH . I 6 HOH A 199 699 218 HOH HOH . I 6 HOH A 200 700 126 HOH HOH . I 6 HOH A 201 701 96 HOH HOH . I 6 HOH A 202 702 204 HOH HOH . I 6 HOH A 203 703 182 HOH HOH . I 6 HOH A 204 704 224 HOH HOH . I 6 HOH A 205 705 85 HOH HOH . I 6 HOH A 206 706 201 HOH HOH . I 6 HOH A 207 707 251 HOH HOH . I 6 HOH A 208 708 121 HOH HOH . I 6 HOH A 209 709 97 HOH HOH . I 6 HOH A 210 710 236 HOH HOH . I 6 HOH A 211 711 145 HOH HOH . I 6 HOH A 212 712 237 HOH HOH . I 6 HOH A 213 713 229 HOH HOH . I 6 HOH A 214 714 232 HOH HOH . I 6 HOH A 215 715 133 HOH HOH . I 6 HOH A 216 716 248 HOH HOH . I 6 HOH A 217 717 241 HOH HOH . I 6 HOH A 218 718 238 HOH HOH . I 6 HOH A 219 719 162 HOH HOH . I 6 HOH A 220 720 171 HOH HOH . I 6 HOH A 221 721 263 HOH HOH . I 6 HOH A 222 722 227 HOH HOH . I 6 HOH A 223 723 249 HOH HOH . I 6 HOH A 224 724 225 HOH HOH . I 6 HOH A 225 725 235 HOH HOH . I 6 HOH A 226 726 245 HOH HOH . I 6 HOH A 227 727 220 HOH HOH . I 6 HOH A 228 728 233 HOH HOH . I 6 HOH A 229 729 131 HOH HOH . I 6 HOH A 230 730 243 HOH HOH . I 6 HOH A 231 731 57 HOH HOH . I 6 HOH A 232 732 222 HOH HOH . I 6 HOH A 233 733 78 HOH HOH . I 6 HOH A 234 734 258 HOH HOH . I 6 HOH A 235 735 240 HOH HOH . I 6 HOH A 236 736 167 HOH HOH . I 6 HOH A 237 737 13 HOH HOH . I 6 HOH A 238 738 221 HOH HOH . I 6 HOH A 239 739 234 HOH HOH . I 6 HOH A 240 740 63 HOH HOH . I 6 HOH A 241 741 244 HOH HOH . I 6 HOH A 242 742 231 HOH HOH . I 6 HOH A 243 743 183 HOH HOH . I 6 HOH A 244 744 211 HOH HOH . I 6 HOH A 245 745 166 HOH HOH . I 6 HOH A 246 746 77 HOH HOH . I 6 HOH A 247 747 106 HOH HOH . I 6 HOH A 248 748 149 HOH HOH . I 6 HOH A 249 749 65 HOH HOH . I 6 HOH A 250 750 216 HOH HOH . I 6 HOH A 251 751 250 HOH HOH . I 6 HOH A 252 752 144 HOH HOH . I 6 HOH A 253 753 129 HOH HOH . I 6 HOH A 254 754 125 HOH HOH . I 6 HOH A 255 755 164 HOH HOH . I 6 HOH A 256 756 256 HOH HOH . I 6 HOH A 257 757 264 HOH HOH . I 6 HOH A 258 758 252 HOH HOH . I 6 HOH A 259 759 165 HOH HOH . I 6 HOH A 260 760 253 HOH HOH . I 6 HOH A 261 761 254 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 30.734 24.936 34.822 1 58.67 ? C1 EDO 405 A 1 HETATM 2 O O1 EDO . . . F 4 30.117 26.128 35.3 1 59.28 ? O1 EDO 405 A 1 HETATM 3 C C2 EDO . . . F 4 31.723 25.312 33.747 1 63.41 ? C2 EDO 405 A 1 HETATM 4 O O2 EDO . . . F 4 30.962 25.524 32.553 1 62.28 ? O2 EDO 405 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #