data_5OJA
#
_model_server_result.job_id            8q6HGXhpguNK6quz5DBEEg 
_model_server_result.datetime_utc      '2024-10-17 06:29:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5oja 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    5OJA 
#
_exptl.entry_id    5OJA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              69.085 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            IMIDAZOLE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.06 
_cell.angle_gamma         90 
_cell.entry_id            5OJA 
_cell.length_a            34.13 
_cell.length_b            51.9 
_cell.length_c            39.35 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OJA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 94 A HIS 93 1_555 C FE HEM . A HEM 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc2 B N1 IMD . A IMD 201 1_555 C FE HEM . A HEM 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
#
_chem_comp.formula           'C3 H5 N2 1' 
_chem_comp.formula_weight    69.085 
_chem_comp.id                IMD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              IMIDAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 IMD sing 242 n y 
N1 C5 IMD sing 243 n y 
N1 HN1 IMD sing 244 n n 
C2 N3 IMD doub 245 n y 
C2 H2 IMD sing 246 n n 
N3 C4 IMD sing 247 n y 
N3 HN3 IMD sing 248 n n 
C4 C5 IMD doub 249 n y 
C4 H4 IMD sing 250 n n 
C5 H5 IMD sing 251 n n 
#
_atom_sites.entry_id                     5OJA 
_atom_sites.fract_transf_matrix[1][1]    0.0293 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004149 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019268 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025666 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 IMD A 1 201 1 IMD IMD . 
C 3 HEM A 1 202 1 HEM HEM . 
D 4 HOH A 1 301 44 HOH HOH . 
D 4 HOH A 2 302 83 HOH HOH . 
D 4 HOH A 3 303 92 HOH HOH . 
D 4 HOH A 4 304 42 HOH HOH . 
D 4 HOH A 5 305 98 HOH HOH . 
D 4 HOH A 6 306 68 HOH HOH . 
D 4 HOH A 7 307 132 HOH HOH . 
D 4 HOH A 8 308 157 HOH HOH . 
D 4 HOH A 9 309 48 HOH HOH . 
D 4 HOH A 10 310 86 HOH HOH . 
D 4 HOH A 11 311 65 HOH HOH . 
D 4 HOH A 12 312 107 HOH HOH . 
D 4 HOH A 13 313 89 HOH HOH . 
D 4 HOH A 14 314 14 HOH HOH . 
D 4 HOH A 15 315 91 HOH HOH . 
D 4 HOH A 16 316 118 HOH HOH . 
D 4 HOH A 17 317 75 HOH HOH . 
D 4 HOH A 18 318 78 HOH HOH . 
D 4 HOH A 19 319 2 HOH HOH . 
D 4 HOH A 20 320 9 HOH HOH . 
D 4 HOH A 21 321 112 HOH HOH . 
D 4 HOH A 22 322 88 HOH HOH . 
D 4 HOH A 23 323 58 HOH HOH . 
D 4 HOH A 24 324 6 HOH HOH . 
D 4 HOH A 25 325 74 HOH HOH . 
D 4 HOH A 26 326 63 HOH HOH . 
D 4 HOH A 27 327 1 HOH HOH . 
D 4 HOH A 28 328 11 HOH HOH . 
D 4 HOH A 29 329 67 HOH HOH . 
D 4 HOH A 30 330 79 HOH HOH . 
D 4 HOH A 31 331 70 HOH HOH . 
D 4 HOH A 32 332 57 HOH HOH . 
D 4 HOH A 33 333 153 HOH HOH . 
D 4 HOH A 34 334 103 HOH HOH . 
D 4 HOH A 35 335 30 HOH HOH . 
D 4 HOH A 36 336 134 HOH HOH . 
D 4 HOH A 37 337 51 HOH HOH . 
D 4 HOH A 38 338 4 HOH HOH . 
D 4 HOH A 39 339 106 HOH HOH . 
D 4 HOH A 40 340 72 HOH HOH . 
D 4 HOH A 41 341 31 HOH HOH . 
D 4 HOH A 42 342 27 HOH HOH . 
D 4 HOH A 43 343 43 HOH HOH . 
D 4 HOH A 44 344 36 HOH HOH . 
D 4 HOH A 45 345 17 HOH HOH . 
D 4 HOH A 46 346 81 HOH HOH . 
D 4 HOH A 47 347 55 HOH HOH . 
D 4 HOH A 48 348 3 HOH HOH . 
D 4 HOH A 49 349 64 HOH HOH . 
D 4 HOH A 50 350 26 HOH HOH . 
D 4 HOH A 51 351 25 HOH HOH . 
D 4 HOH A 52 352 71 HOH HOH . 
D 4 HOH A 53 353 143 HOH HOH . 
D 4 HOH A 54 354 33 HOH HOH . 
D 4 HOH A 55 355 10 HOH HOH . 
D 4 HOH A 56 356 113 HOH HOH . 
D 4 HOH A 57 357 146 HOH HOH . 
D 4 HOH A 58 358 5 HOH HOH . 
D 4 HOH A 59 359 105 HOH HOH . 
D 4 HOH A 60 360 150 HOH HOH . 
D 4 HOH A 61 361 126 HOH HOH . 
D 4 HOH A 62 362 87 HOH HOH . 
D 4 HOH A 63 363 23 HOH HOH . 
D 4 HOH A 64 364 15 HOH HOH . 
D 4 HOH A 65 365 39 HOH HOH . 
D 4 HOH A 66 366 45 HOH HOH . 
D 4 HOH A 67 367 32 HOH HOH . 
D 4 HOH A 68 368 116 HOH HOH . 
D 4 HOH A 69 369 94 HOH HOH . 
D 4 HOH A 70 370 28 HOH HOH . 
D 4 HOH A 71 371 38 HOH HOH . 
D 4 HOH A 72 372 145 HOH HOH . 
D 4 HOH A 73 373 7 HOH HOH . 
D 4 HOH A 74 374 40 HOH HOH . 
D 4 HOH A 75 375 61 HOH HOH . 
D 4 HOH A 76 376 13 HOH HOH . 
D 4 HOH A 77 377 21 HOH HOH . 
D 4 HOH A 78 378 35 HOH HOH . 
D 4 HOH A 79 379 19 HOH HOH . 
D 4 HOH A 80 380 20 HOH HOH . 
D 4 HOH A 81 381 54 HOH HOH . 
D 4 HOH A 82 382 117 HOH HOH . 
D 4 HOH A 83 383 56 HOH HOH . 
D 4 HOH A 84 384 52 HOH HOH . 
D 4 HOH A 85 385 135 HOH HOH . 
D 4 HOH A 86 386 47 HOH HOH . 
D 4 HOH A 87 387 12 HOH HOH . 
D 4 HOH A 88 388 95 HOH HOH . 
D 4 HOH A 89 389 93 HOH HOH . 
D 4 HOH A 90 390 8 HOH HOH . 
D 4 HOH A 91 391 76 HOH HOH . 
D 4 HOH A 92 392 41 HOH HOH . 
D 4 HOH A 93 393 125 HOH HOH . 
D 4 HOH A 94 394 29 HOH HOH . 
D 4 HOH A 95 395 80 HOH HOH . 
D 4 HOH A 96 396 99 HOH HOH . 
D 4 HOH A 97 397 124 HOH HOH . 
D 4 HOH A 98 398 24 HOH HOH . 
D 4 HOH A 99 399 102 HOH HOH . 
D 4 HOH A 100 400 84 HOH HOH . 
D 4 HOH A 101 401 162 HOH HOH . 
D 4 HOH A 102 402 121 HOH HOH . 
D 4 HOH A 103 403 110 HOH HOH . 
D 4 HOH A 104 404 34 HOH HOH . 
D 4 HOH A 105 405 90 HOH HOH . 
D 4 HOH A 106 406 50 HOH HOH . 
D 4 HOH A 107 407 114 HOH HOH . 
D 4 HOH A 108 408 82 HOH HOH . 
D 4 HOH A 109 409 62 HOH HOH . 
D 4 HOH A 110 410 147 HOH HOH . 
D 4 HOH A 111 411 60 HOH HOH . 
D 4 HOH A 112 412 130 HOH HOH . 
D 4 HOH A 113 413 127 HOH HOH . 
D 4 HOH A 114 414 109 HOH HOH . 
D 4 HOH A 115 415 141 HOH HOH . 
D 4 HOH A 116 416 120 HOH HOH . 
D 4 HOH A 117 417 46 HOH HOH . 
D 4 HOH A 118 418 163 HOH HOH . 
D 4 HOH A 119 419 138 HOH HOH . 
D 4 HOH A 120 420 164 HOH HOH . 
D 4 HOH A 121 421 142 HOH HOH . 
D 4 HOH A 122 422 136 HOH HOH . 
D 4 HOH A 123 423 69 HOH HOH . 
D 4 HOH A 124 424 139 HOH HOH . 
D 4 HOH A 125 425 96 HOH HOH . 
D 4 HOH A 126 426 115 HOH HOH . 
D 4 HOH A 127 427 133 HOH HOH . 
D 4 HOH A 128 428 122 HOH HOH . 
D 4 HOH A 129 429 156 HOH HOH . 
D 4 HOH A 130 430 73 HOH HOH . 
D 4 HOH A 131 431 22 HOH HOH . 
D 4 HOH A 132 432 148 HOH HOH . 
D 4 HOH A 133 433 159 HOH HOH . 
D 4 HOH A 134 434 144 HOH HOH . 
D 4 HOH A 135 435 104 HOH HOH . 
D 4 HOH A 136 436 154 HOH HOH . 
D 4 HOH A 137 437 119 HOH HOH . 
D 4 HOH A 138 438 18 HOH HOH . 
D 4 HOH A 139 439 131 HOH HOH . 
D 4 HOH A 140 440 49 HOH HOH . 
D 4 HOH A 141 441 160 HOH HOH . 
D 4 HOH A 142 442 53 HOH HOH . 
D 4 HOH A 143 443 66 HOH HOH . 
D 4 HOH A 144 444 137 HOH HOH . 
D 4 HOH A 145 445 77 HOH HOH . 
D 4 HOH A 146 446 140 HOH HOH . 
D 4 HOH A 147 447 152 HOH HOH . 
D 4 HOH A 148 448 97 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 IMD . . . B 2 2.915 6.392 14.92 1 18.41 ? N1 IMD 201 A 1 
HETATM 2 C C2 IMD . . . B 2 3.419 7.516 14.39 1 18.22 ? C2 IMD 201 A 1 
HETATM 3 N N3 IMD . . . B 2 3.133 7.484 13.086 1 17.38 ? N3 IMD 201 A 1 
HETATM 4 C C4 IMD . . . B 2 2.483 6.346 12.804 1 17.78 ? C4 IMD 201 A 1 
HETATM 5 C C5 IMD . . . B 2 2.324 5.633 13.976 1 17.67 ? C5 IMD 201 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           263 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#