data_5OJL # _model_server_result.job_id XQFGCcaSQ1gxWcoZuek5Eg _model_server_result.datetime_utc '2024-11-05 00:51:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ojl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5OJL # _exptl.entry_id 5OJL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.27 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-methyl-7~{H}-benzo[d][2]benzazepine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OJL _cell.length_a 53.329 _cell.length_b 61.128 _cell.length_c 167.811 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OJL _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -83.9055 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H13 N' _chem_comp.formula_weight 207.27 _chem_comp.id 9X5 _chem_comp.mon_nstd_flag . _chem_comp.name 5-methyl-7~{H}-benzo[d][2]benzazepine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C8 9X5 doub 1 n y C7 C6 9X5 sing 2 n y C8 C9 9X5 sing 3 n y C6 C5 9X5 doub 4 n y C9 C10 9X5 sing 5 n n C9 C4 9X5 doub 6 n y C11 C10 9X5 doub 7 n y C11 C12 9X5 sing 8 n y C5 C4 9X5 sing 9 n y C10 C15 9X5 sing 10 n y C12 C13 9X5 doub 11 n y C4 C3 9X5 sing 12 n n C1 C2 9X5 sing 13 n n C15 C2 9X5 sing 14 n n C15 C14 9X5 doub 15 n y C13 C14 9X5 sing 16 n y C2 N1 9X5 doub 17 n n N1 C3 9X5 sing 18 n n C3 H1 9X5 sing 19 n n C3 H2 9X5 sing 20 n n C1 H3 9X5 sing 21 n n C1 H4 9X5 sing 22 n n C1 H5 9X5 sing 23 n n C5 H6 9X5 sing 24 n n C6 H7 9X5 sing 25 n n C7 H8 9X5 sing 26 n n C8 H9 9X5 sing 27 n n C11 H10 9X5 sing 28 n n C12 H11 9X5 sing 29 n n C13 H12 9X5 sing 30 n n C14 H13 9X5 sing 31 n n # _atom_sites.entry_id 5OJL _atom_sites.fract_transf_matrix[1][1] 0.018752 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016359 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005959 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9X5 A 1 301 1 9X5 H4P . C 3 TXP A 1 302 2 TXP THN . D 4 HOH A 1 401 122 HOH HOH . D 4 HOH A 2 402 80 HOH HOH . D 4 HOH A 3 403 95 HOH HOH . D 4 HOH A 4 404 84 HOH HOH . D 4 HOH A 5 405 90 HOH HOH . D 4 HOH A 6 406 104 HOH HOH . D 4 HOH A 7 407 94 HOH HOH . D 4 HOH A 8 408 86 HOH HOH . D 4 HOH A 9 409 18 HOH HOH . D 4 HOH A 10 410 28 HOH HOH . D 4 HOH A 11 411 29 HOH HOH . D 4 HOH A 12 412 116 HOH HOH . D 4 HOH A 13 413 48 HOH HOH . D 4 HOH A 14 414 59 HOH HOH . D 4 HOH A 15 415 82 HOH HOH . D 4 HOH A 16 416 32 HOH HOH . D 4 HOH A 17 417 20 HOH HOH . D 4 HOH A 18 418 79 HOH HOH . D 4 HOH A 19 419 103 HOH HOH . D 4 HOH A 20 420 43 HOH HOH . D 4 HOH A 21 421 37 HOH HOH . D 4 HOH A 22 422 16 HOH HOH . D 4 HOH A 23 423 40 HOH HOH . D 4 HOH A 24 424 102 HOH HOH . D 4 HOH A 25 425 38 HOH HOH . D 4 HOH A 26 426 87 HOH HOH . D 4 HOH A 27 427 124 HOH HOH . D 4 HOH A 28 428 3 HOH HOH . D 4 HOH A 29 429 74 HOH HOH . D 4 HOH A 30 430 112 HOH HOH . D 4 HOH A 31 431 39 HOH HOH . D 4 HOH A 32 432 49 HOH HOH . D 4 HOH A 33 433 36 HOH HOH . D 4 HOH A 34 434 27 HOH HOH . D 4 HOH A 35 435 92 HOH HOH . D 4 HOH A 36 436 71 HOH HOH . D 4 HOH A 37 437 13 HOH HOH . D 4 HOH A 38 438 54 HOH HOH . D 4 HOH A 39 439 6 HOH HOH . D 4 HOH A 40 440 46 HOH HOH . D 4 HOH A 41 441 33 HOH HOH . D 4 HOH A 42 442 5 HOH HOH . D 4 HOH A 43 443 89 HOH HOH . D 4 HOH A 44 444 70 HOH HOH . D 4 HOH A 45 445 24 HOH HOH . D 4 HOH A 46 446 9 HOH HOH . D 4 HOH A 47 447 19 HOH HOH . D 4 HOH A 48 448 2 HOH HOH . D 4 HOH A 49 449 57 HOH HOH . D 4 HOH A 50 450 55 HOH HOH . D 4 HOH A 51 451 52 HOH HOH . D 4 HOH A 52 452 60 HOH HOH . D 4 HOH A 53 453 72 HOH HOH . D 4 HOH A 54 454 17 HOH HOH . D 4 HOH A 55 455 22 HOH HOH . D 4 HOH A 56 456 47 HOH HOH . D 4 HOH A 57 457 85 HOH HOH . D 4 HOH A 58 458 81 HOH HOH . D 4 HOH A 59 459 35 HOH HOH . D 4 HOH A 60 460 30 HOH HOH . D 4 HOH A 61 461 44 HOH HOH . D 4 HOH A 62 462 45 HOH HOH . D 4 HOH A 63 463 15 HOH HOH . D 4 HOH A 64 464 88 HOH HOH . D 4 HOH A 65 465 101 HOH HOH . D 4 HOH A 66 466 25 HOH HOH . D 4 HOH A 67 467 7 HOH HOH . D 4 HOH A 68 468 10 HOH HOH . D 4 HOH A 69 469 69 HOH HOH . D 4 HOH A 70 470 53 HOH HOH . D 4 HOH A 71 471 109 HOH HOH . D 4 HOH A 72 472 12 HOH HOH . D 4 HOH A 73 473 26 HOH HOH . D 4 HOH A 74 474 14 HOH HOH . D 4 HOH A 75 475 34 HOH HOH . D 4 HOH A 76 476 31 HOH HOH . D 4 HOH A 77 477 56 HOH HOH . D 4 HOH A 78 478 91 HOH HOH . D 4 HOH A 79 479 83 HOH HOH . D 4 HOH A 80 480 75 HOH HOH . D 4 HOH A 81 481 23 HOH HOH . D 4 HOH A 82 482 51 HOH HOH . D 4 HOH A 83 483 41 HOH HOH . D 4 HOH A 84 484 99 HOH HOH . D 4 HOH A 85 485 111 HOH HOH . D 4 HOH A 86 486 125 HOH HOH . D 4 HOH A 87 487 110 HOH HOH . D 4 HOH A 88 488 76 HOH HOH . D 4 HOH A 89 489 50 HOH HOH . D 4 HOH A 90 490 68 HOH HOH . D 4 HOH A 91 491 66 HOH HOH . D 4 HOH A 92 492 78 HOH HOH . D 4 HOH A 93 493 93 HOH HOH . D 4 HOH A 94 494 63 HOH HOH . D 4 HOH A 95 495 67 HOH HOH . D 4 HOH A 96 496 58 HOH HOH . D 4 HOH A 97 497 106 HOH HOH . D 4 HOH A 98 498 127 HOH HOH . D 4 HOH A 99 499 97 HOH HOH . D 4 HOH A 100 500 100 HOH HOH . D 4 HOH A 101 501 65 HOH HOH . D 4 HOH A 102 502 121 HOH HOH . D 4 HOH A 103 503 105 HOH HOH . D 4 HOH A 104 504 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 9X5 . . . B 2 -9.812 -12.016 -49.969 1 58.67 ? C3 9X5 301 A 1 HETATM 2 C C4 9X5 . . . B 2 -9.066 -11.963 -51.287 1 56.68 ? C4 9X5 301 A 1 HETATM 3 C C1 9X5 . . . B 2 -13.092 -13.592 -51.016 1 54.54 ? C1 9X5 301 A 1 HETATM 4 C C2 9X5 . . . B 2 -11.629 -13.424 -50.696 1 57.53 ? C2 9X5 301 A 1 HETATM 5 N N1 9X5 . . . B 2 -11.226 -12.312 -50.201 1 57.37 ? N1 9X5 301 A 1 HETATM 6 C C5 9X5 . . . B 2 -8.527 -10.763 -51.74 1 61.12 ? C5 9X5 301 A 1 HETATM 7 C C6 9X5 . . . B 2 -7.844 -10.7 -52.938 1 60.72 ? C6 9X5 301 A 1 HETATM 8 C C7 9X5 . . . B 2 -7.708 -11.829 -53.713 1 62.87 ? C7 9X5 301 A 1 HETATM 9 C C8 9X5 . . . B 2 -8.244 -13.033 -53.288 1 61.22 ? C8 9X5 301 A 1 HETATM 10 C C9 9X5 . . . B 2 -8.934 -13.122 -52.069 1 63.6 ? C9 9X5 301 A 1 HETATM 11 C C10 9X5 . . . B 2 -9.493 -14.451 -51.618 1 57.3 ? C10 9X5 301 A 1 HETATM 12 C C11 9X5 . . . B 2 -8.735 -15.607 -51.845 1 61.46 ? C11 9X5 301 A 1 HETATM 13 C C12 9X5 . . . B 2 -9.174 -16.853 -51.441 1 62.29 ? C12 9X5 301 A 1 HETATM 14 C C13 9X5 . . . B 2 -10.384 -16.983 -50.8 1 57.91 ? C13 9X5 301 A 1 HETATM 15 C C14 9X5 . . . B 2 -11.165 -15.867 -50.575 1 60.78 ? C14 9X5 301 A 1 HETATM 16 C C15 9X5 . . . B 2 -10.733 -14.591 -50.963 1 54.29 ? C15 9X5 301 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 16 #