data_5OJL # _model_server_result.job_id DQqDU0onNkXIUMU_VIZTnA _model_server_result.datetime_utc '2024-11-27 20:06:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ojl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5OJL # _exptl.entry_id 5OJL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 747.437 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OJL _cell.length_a 53.329 _cell.length_b 61.128 _cell.length_c 167.811 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OJL _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -83.9055 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H32 N7 O17 P3' _chem_comp.formula_weight 747.437 _chem_comp.id TXP _chem_comp.mon_nstd_flag n _chem_comp.name '1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2N PN TXP sing 365 n n O2N HO2N TXP sing 366 n n PN O1N TXP doub 367 n n PN O3 TXP sing 368 n n PN "O5'A" TXP sing 369 n n "O5'A" "C5'A" TXP sing 370 n n "C5'A" "C4'A" TXP sing 371 n n "C5'A" "H5'1" TXP sing 372 n n "C5'A" "H5'2" TXP sing 373 n n "C4'A" "C3'A" TXP sing 374 n n "C4'A" "O4'A" TXP sing 375 n n "C4'A" "H4'A" TXP sing 376 n n "C3'A" "O3'A" TXP sing 377 n n "C3'A" "C2'A" TXP sing 378 n n "C3'A" "H3'A" TXP sing 379 n n "O3'A" HO3A TXP sing 380 n n "C2'A" "C1'A" TXP sing 381 n n "C2'A" "O2'A" TXP sing 382 n n "C2'A" "H2'A" TXP sing 383 n n "O2'A" HO2' TXP sing 384 n n "C1'A" "O4'A" TXP sing 385 n n "C1'A" N1N TXP sing 386 n n "C1'A" "H1'A" TXP sing 387 n n N1N C2N TXP sing 388 n n N1N C6N TXP sing 389 n n C6N C5N TXP sing 390 n n C6N H6N1 TXP sing 391 n n C6N H6N2 TXP sing 392 n n C5N C4N TXP doub 393 n n C5N H5N TXP sing 394 n n C4N C3N TXP sing 395 n n C4N H4N TXP sing 396 n n C3N C2N TXP sing 397 n n C3N H3N TXP sing 398 n n C3N C7N TXP sing 399 n n C7N N7N TXP sing 400 n n C7N O7N TXP doub 401 n n N7N H7N1 TXP sing 402 n n N7N H7N2 TXP sing 403 n n C2N H2N1 TXP sing 404 n n C2N H2N2 TXP sing 405 n n O3 PA TXP sing 406 n n PA O5' TXP sing 407 n n PA O1A TXP doub 408 n n PA O2A TXP sing 409 n n O2A HO2A TXP sing 410 n n O5' C5' TXP sing 411 n n C5' C4' TXP sing 412 n n C5' "H5'A" TXP sing 413 n n C5' "H5'B" TXP sing 414 n n C4' O4' TXP sing 415 n n C4' C3' TXP sing 416 n n C4' H4' TXP sing 417 n n C3' C2' TXP sing 418 n n C3' O3' TXP sing 419 n n C3' H3' TXP sing 420 n n O3' HO3' TXP sing 421 n n O4' C1' TXP sing 422 n n C1' N9A TXP sing 423 n n C1' C2' TXP sing 424 n n C1' H1' TXP sing 425 n n C2' O2' TXP sing 426 n n C2' H2' TXP sing 427 n n O2' P2 TXP sing 428 n n P2 OP1 TXP doub 429 n n P2 OP2 TXP sing 430 n n P2 OP3 TXP sing 431 n n OP3 HOP3 TXP sing 432 n n OP2 HOP2 TXP sing 433 n n N9A C4A TXP sing 434 n y N9A C8A TXP sing 435 n y C4A N3A TXP doub 436 n y C4A C5A TXP sing 437 n y N3A C2A TXP sing 438 n y C2A N1A TXP doub 439 n y C2A H2A TXP sing 440 n n N1A C6A TXP sing 441 n y C6A N6A TXP sing 442 n n C6A C5A TXP doub 443 n y N6A H6A1 TXP sing 444 n n N6A H6A2 TXP sing 445 n n C5A N7A TXP sing 446 n y N7A C8A TXP doub 447 n y C8A H8A TXP sing 448 n n # _atom_sites.entry_id 5OJL _atom_sites.fract_transf_matrix[1][1] 0.018752 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016359 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005959 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9X5 A 1 301 1 9X5 H4P . C 3 TXP A 1 302 2 TXP THN . D 4 HOH A 1 401 122 HOH HOH . D 4 HOH A 2 402 80 HOH HOH . D 4 HOH A 3 403 95 HOH HOH . D 4 HOH A 4 404 84 HOH HOH . D 4 HOH A 5 405 90 HOH HOH . D 4 HOH A 6 406 104 HOH HOH . D 4 HOH A 7 407 94 HOH HOH . D 4 HOH A 8 408 86 HOH HOH . D 4 HOH A 9 409 18 HOH HOH . D 4 HOH A 10 410 28 HOH HOH . D 4 HOH A 11 411 29 HOH HOH . D 4 HOH A 12 412 116 HOH HOH . D 4 HOH A 13 413 48 HOH HOH . D 4 HOH A 14 414 59 HOH HOH . D 4 HOH A 15 415 82 HOH HOH . D 4 HOH A 16 416 32 HOH HOH . D 4 HOH A 17 417 20 HOH HOH . D 4 HOH A 18 418 79 HOH HOH . D 4 HOH A 19 419 103 HOH HOH . D 4 HOH A 20 420 43 HOH HOH . D 4 HOH A 21 421 37 HOH HOH . D 4 HOH A 22 422 16 HOH HOH . D 4 HOH A 23 423 40 HOH HOH . D 4 HOH A 24 424 102 HOH HOH . D 4 HOH A 25 425 38 HOH HOH . D 4 HOH A 26 426 87 HOH HOH . D 4 HOH A 27 427 124 HOH HOH . D 4 HOH A 28 428 3 HOH HOH . D 4 HOH A 29 429 74 HOH HOH . D 4 HOH A 30 430 112 HOH HOH . D 4 HOH A 31 431 39 HOH HOH . D 4 HOH A 32 432 49 HOH HOH . D 4 HOH A 33 433 36 HOH HOH . D 4 HOH A 34 434 27 HOH HOH . D 4 HOH A 35 435 92 HOH HOH . D 4 HOH A 36 436 71 HOH HOH . D 4 HOH A 37 437 13 HOH HOH . D 4 HOH A 38 438 54 HOH HOH . D 4 HOH A 39 439 6 HOH HOH . D 4 HOH A 40 440 46 HOH HOH . D 4 HOH A 41 441 33 HOH HOH . D 4 HOH A 42 442 5 HOH HOH . D 4 HOH A 43 443 89 HOH HOH . D 4 HOH A 44 444 70 HOH HOH . D 4 HOH A 45 445 24 HOH HOH . D 4 HOH A 46 446 9 HOH HOH . D 4 HOH A 47 447 19 HOH HOH . D 4 HOH A 48 448 2 HOH HOH . D 4 HOH A 49 449 57 HOH HOH . D 4 HOH A 50 450 55 HOH HOH . D 4 HOH A 51 451 52 HOH HOH . D 4 HOH A 52 452 60 HOH HOH . D 4 HOH A 53 453 72 HOH HOH . D 4 HOH A 54 454 17 HOH HOH . D 4 HOH A 55 455 22 HOH HOH . D 4 HOH A 56 456 47 HOH HOH . D 4 HOH A 57 457 85 HOH HOH . D 4 HOH A 58 458 81 HOH HOH . D 4 HOH A 59 459 35 HOH HOH . D 4 HOH A 60 460 30 HOH HOH . D 4 HOH A 61 461 44 HOH HOH . D 4 HOH A 62 462 45 HOH HOH . D 4 HOH A 63 463 15 HOH HOH . D 4 HOH A 64 464 88 HOH HOH . D 4 HOH A 65 465 101 HOH HOH . D 4 HOH A 66 466 25 HOH HOH . D 4 HOH A 67 467 7 HOH HOH . D 4 HOH A 68 468 10 HOH HOH . D 4 HOH A 69 469 69 HOH HOH . D 4 HOH A 70 470 53 HOH HOH . D 4 HOH A 71 471 109 HOH HOH . D 4 HOH A 72 472 12 HOH HOH . D 4 HOH A 73 473 26 HOH HOH . D 4 HOH A 74 474 14 HOH HOH . D 4 HOH A 75 475 34 HOH HOH . D 4 HOH A 76 476 31 HOH HOH . D 4 HOH A 77 477 56 HOH HOH . D 4 HOH A 78 478 91 HOH HOH . D 4 HOH A 79 479 83 HOH HOH . D 4 HOH A 80 480 75 HOH HOH . D 4 HOH A 81 481 23 HOH HOH . D 4 HOH A 82 482 51 HOH HOH . D 4 HOH A 83 483 41 HOH HOH . D 4 HOH A 84 484 99 HOH HOH . D 4 HOH A 85 485 111 HOH HOH . D 4 HOH A 86 486 125 HOH HOH . D 4 HOH A 87 487 110 HOH HOH . D 4 HOH A 88 488 76 HOH HOH . D 4 HOH A 89 489 50 HOH HOH . D 4 HOH A 90 490 68 HOH HOH . D 4 HOH A 91 491 66 HOH HOH . D 4 HOH A 92 492 78 HOH HOH . D 4 HOH A 93 493 93 HOH HOH . D 4 HOH A 94 494 63 HOH HOH . D 4 HOH A 95 495 67 HOH HOH . D 4 HOH A 96 496 58 HOH HOH . D 4 HOH A 97 497 106 HOH HOH . D 4 HOH A 98 498 127 HOH HOH . D 4 HOH A 99 499 97 HOH HOH . D 4 HOH A 100 500 100 HOH HOH . D 4 HOH A 101 501 65 HOH HOH . D 4 HOH A 102 502 121 HOH HOH . D 4 HOH A 103 503 105 HOH HOH . D 4 HOH A 104 504 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2N TXP . . . C 3 -14.69 -17.15 -61.935 1 57.32 ? O2N TXP 302 A 1 HETATM 2 P PN TXP . . . C 3 -14.54 -17.705 -63.315 1 58.93 ? PN TXP 302 A 1 HETATM 3 O O1N TXP . . . C 3 -14.949 -16.88 -64.46 1 42.62 -1 O1N TXP 302 A 1 HETATM 4 O "O5'A" TXP . . . C 3 -12.925 -18.061 -63.371 1 57.04 ? "O5'A" TXP 302 A 1 HETATM 5 C "C5'A" TXP . . . C 3 -12.299 -18.416 -64.587 1 56.16 ? "C5'A" TXP 302 A 1 HETATM 6 C "C4'A" TXP . . . C 3 -10.781 -18.453 -64.329 1 53.6 ? "C4'A" TXP 302 A 1 HETATM 7 C "C3'A" TXP . . . C 3 -10.397 -19.717 -63.554 1 51.66 ? "C3'A" TXP 302 A 1 HETATM 8 O "O3'A" TXP . . . C 3 -9.231 -20.371 -64.201 1 36.72 ? "O3'A" TXP 302 A 1 HETATM 9 C "C2'A" TXP . . . C 3 -10.163 -19.176 -62.128 0.5 52.09 ? "C2'A" TXP 302 A 1 HETATM 10 O "O2'A" TXP . . . C 3 -9.267 -20.059 -61.373 1 52.57 ? "O2'A" TXP 302 A 1 HETATM 11 C "C1'A" TXP . . . C 3 -9.599 -17.742 -62.368 0.5 54.52 ? "C1'A" TXP 302 A 1 HETATM 12 N N1N TXP . . . C 3 -9.864 -16.705 -61.328 1 56.58 ? N1N TXP 302 A 1 HETATM 13 C C6N TXP . . . C 3 -8.625 -16.147 -60.702 1 55.79 ? C6N TXP 302 A 1 HETATM 14 C C5N TXP . . . C 3 -8.816 -15.193 -59.466 1 60.4 ? C5N TXP 302 A 1 HETATM 15 C C4N TXP . . . C 3 -10.025 -15.524 -58.572 1 60.41 ? C4N TXP 302 A 1 HETATM 16 C C3N TXP . . . C 3 -11.22 -15.814 -59.512 1 59.97 ? C3N TXP 302 A 1 HETATM 17 C C7N TXP . . . C 3 -12.615 -15.722 -58.833 1 56.78 ? C7N TXP 302 A 1 HETATM 18 O O7N TXP . . . C 3 -12.714 -15.183 -57.725 1 56.73 ? O7N TXP 302 A 1 HETATM 19 N N7N TXP . . . C 3 -13.682 -16.093 -59.582 1 50.65 ? N7N TXP 302 A 1 HETATM 20 C C2N TXP . . . C 3 -10.87 -17.119 -60.313 0.5 58.46 ? C2N TXP 302 A 1 HETATM 21 O "O4'A" TXP . . . C 3 -10.356 -17.292 -63.474 1 52.74 ? "O4'A" TXP 302 A 1 HETATM 22 O O3 TXP . . . C 3 -15.173 -19.284 -63.572 1 50.69 ? O3 TXP 302 A 1 HETATM 23 P PA TXP . . . C 3 -16.67 -19.779 -64.019 1 55.47 ? PA TXP 302 A 1 HETATM 24 O O1A TXP . . . C 3 -16.755 -21.183 -63.632 1 53.98 ? O1A TXP 302 A 1 HETATM 25 O O2A TXP . . . C 3 -17.729 -18.768 -63.649 1 52.08 -1 O2A TXP 302 A 1 HETATM 26 O O5' TXP . . . C 3 -16.407 -19.819 -65.684 1 53.69 ? O5' TXP 302 A 1 HETATM 27 C C5' TXP . . . C 3 -16.01 -20.992 -66.396 1 41.65 ? C5' TXP 302 A 1 HETATM 28 C C4' TXP . . . C 3 -15.85 -20.584 -67.875 1 36.64 ? C4' TXP 302 A 1 HETATM 29 C C3' TXP . . . C 3 -17.214 -20.434 -68.577 1 36.05 ? C3' TXP 302 A 1 HETATM 30 O O3' TXP . . . C 3 -17.11 -19.382 -69.574 1 30.39 ? O3' TXP 302 A 1 HETATM 31 O O4' TXP . . . C 3 -15.205 -21.625 -68.516 1 32.75 ? O4' TXP 302 A 1 HETATM 32 C C1' TXP . . . C 3 -16.002 -22.053 -69.691 1 35.96 ? C1' TXP 302 A 1 HETATM 33 C C2' TXP . . . C 3 -17.432 -21.804 -69.213 1 35.97 ? C2' TXP 302 A 1 HETATM 34 O O2' TXP . . . C 3 -18.288 -21.812 -70.351 1 34.3 ? O2' TXP 302 A 1 HETATM 35 P P2 TXP . . . C 3 -20.033 -22.053 -70.203 1 37.07 ? P2 TXP 302 A 1 HETATM 36 O OP3 TXP . . . C 3 -20.531 -20.738 -69.807 1 37.06 ? OP3 TXP 302 A 1 HETATM 37 O OP2 TXP . . . C 3 -20.388 -22.482 -71.529 1 38.49 -1 OP2 TXP 302 A 1 HETATM 38 O OP1 TXP . . . C 3 -20.14 -22.994 -69.046 1 43.15 -1 OP1 TXP 302 A 1 HETATM 39 N N9A TXP . . . C 3 -15.711 -23.481 -70.14 1 35.97 ? N9A TXP 302 A 1 HETATM 40 C C4A TXP . . . C 3 -15.342 -23.932 -71.375 1 36.32 ? C4A TXP 302 A 1 HETATM 41 N N3A TXP . . . C 3 -15.183 -23.29 -72.523 1 37.02 ? N3A TXP 302 A 1 HETATM 42 C C2A TXP . . . C 3 -14.819 -23.994 -73.695 1 38.58 ? C2A TXP 302 A 1 HETATM 43 N N1A TXP . . . C 3 -14.577 -25.38 -73.629 1 36.99 ? N1A TXP 302 A 1 HETATM 44 C C6A TXP . . . C 3 -14.743 -25.955 -72.432 1 37.06 ? C6A TXP 302 A 1 HETATM 45 N N6A TXP . . . C 3 -14.522 -27.276 -72.321 1 46.76 ? N6A TXP 302 A 1 HETATM 46 C C5A TXP . . . C 3 -15.108 -25.254 -71.32 1 40.17 ? C5A TXP 302 A 1 HETATM 47 N N7A TXP . . . C 3 -15.305 -25.59 -70.032 1 35.72 ? N7A TXP 302 A 1 HETATM 48 C C8A TXP . . . C 3 -15.65 -24.536 -69.304 1 39.47 ? C8A TXP 302 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 48 #