data_5OKP
#
_model_server_result.job_id            amsD-NUKBYvNA1JzZvM17g 
_model_server_result.datetime_utc      '2024-11-27 23:06:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5okp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":904}' 
#
_entry.id    5OKP 
#
_exptl.entry_id    5OKP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.7 
_cell.angle_gamma         90 
_cell.entry_id            5OKP 
_cell.length_a            43.745 
_cell.length_b            73.426 
_cell.length_c            157.964 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OKP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     5OKP 
_atom_sites.fract_transf_matrix[1][1]    0.02286 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00028 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013619 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006331 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 901 1 EDO EDO . 
C 2 EDO A 1 902 2 EDO EDO . 
D 2 EDO A 1 903 3 EDO EDO . 
E 2 EDO A 1 904 4 EDO EDO . 
F 3 HOH A 1 1001 28 HOH HOH . 
F 3 HOH A 2 1002 39 HOH HOH . 
F 3 HOH A 3 1003 50 HOH HOH . 
F 3 HOH A 4 1004 117 HOH HOH . 
F 3 HOH A 5 1005 12 HOH HOH . 
F 3 HOH A 6 1006 136 HOH HOH . 
F 3 HOH A 7 1007 124 HOH HOH . 
F 3 HOH A 8 1008 114 HOH HOH . 
F 3 HOH A 9 1009 24 HOH HOH . 
F 3 HOH A 10 1010 1 HOH HOH . 
F 3 HOH A 11 1011 108 HOH HOH . 
F 3 HOH A 12 1012 103 HOH HOH . 
F 3 HOH A 13 1013 14 HOH HOH . 
F 3 HOH A 14 1014 47 HOH HOH . 
F 3 HOH A 15 1015 7 HOH HOH . 
F 3 HOH A 16 1016 76 HOH HOH . 
F 3 HOH A 17 1017 69 HOH HOH . 
F 3 HOH A 18 1018 77 HOH HOH . 
F 3 HOH A 19 1019 45 HOH HOH . 
F 3 HOH A 20 1020 20 HOH HOH . 
F 3 HOH A 21 1021 58 HOH HOH . 
F 3 HOH A 22 1022 26 HOH HOH . 
F 3 HOH A 23 1023 8 HOH HOH . 
F 3 HOH A 24 1024 33 HOH HOH . 
F 3 HOH A 25 1025 84 HOH HOH . 
F 3 HOH A 26 1026 46 HOH HOH . 
F 3 HOH A 27 1027 60 HOH HOH . 
F 3 HOH A 28 1028 85 HOH HOH . 
F 3 HOH A 29 1029 2 HOH HOH . 
F 3 HOH A 30 1030 22 HOH HOH . 
F 3 HOH A 31 1031 107 HOH HOH . 
F 3 HOH A 32 1032 137 HOH HOH . 
F 3 HOH A 33 1033 52 HOH HOH . 
F 3 HOH A 34 1034 62 HOH HOH . 
F 3 HOH A 35 1035 134 HOH HOH . 
F 3 HOH A 36 1036 10 HOH HOH . 
F 3 HOH A 37 1037 41 HOH HOH . 
F 3 HOH A 38 1038 78 HOH HOH . 
F 3 HOH A 39 1039 59 HOH HOH . 
F 3 HOH A 40 1040 18 HOH HOH . 
F 3 HOH A 41 1041 55 HOH HOH . 
F 3 HOH A 42 1042 80 HOH HOH . 
F 3 HOH A 43 1043 71 HOH HOH . 
F 3 HOH A 44 1044 129 HOH HOH . 
F 3 HOH A 45 1045 3 HOH HOH . 
F 3 HOH A 46 1046 102 HOH HOH . 
F 3 HOH A 47 1047 9 HOH HOH . 
F 3 HOH A 48 1048 42 HOH HOH . 
F 3 HOH A 49 1049 81 HOH HOH . 
F 3 HOH A 50 1050 123 HOH HOH . 
F 3 HOH A 51 1051 111 HOH HOH . 
F 3 HOH A 52 1052 31 HOH HOH . 
F 3 HOH A 53 1053 5 HOH HOH . 
F 3 HOH A 54 1054 30 HOH HOH . 
F 3 HOH A 55 1055 16 HOH HOH . 
F 3 HOH A 56 1056 99 HOH HOH . 
F 3 HOH A 57 1057 73 HOH HOH . 
F 3 HOH A 58 1058 61 HOH HOH . 
F 3 HOH A 59 1059 53 HOH HOH . 
F 3 HOH A 60 1060 6 HOH HOH . 
F 3 HOH A 61 1061 23 HOH HOH . 
F 3 HOH A 62 1062 25 HOH HOH . 
F 3 HOH A 63 1063 54 HOH HOH . 
F 3 HOH A 64 1064 67 HOH HOH . 
F 3 HOH A 65 1065 15 HOH HOH . 
F 3 HOH A 66 1066 109 HOH HOH . 
F 3 HOH A 67 1067 11 HOH HOH . 
F 3 HOH A 68 1068 122 HOH HOH . 
F 3 HOH A 69 1069 97 HOH HOH . 
F 3 HOH A 70 1070 92 HOH HOH . 
F 3 HOH A 71 1071 49 HOH HOH . 
F 3 HOH A 72 1072 104 HOH HOH . 
F 3 HOH A 73 1073 32 HOH HOH . 
F 3 HOH A 74 1074 64 HOH HOH . 
F 3 HOH A 75 1075 35 HOH HOH . 
F 3 HOH A 76 1076 135 HOH HOH . 
F 3 HOH A 77 1077 112 HOH HOH . 
F 3 HOH A 78 1078 4 HOH HOH . 
F 3 HOH A 79 1079 63 HOH HOH . 
F 3 HOH A 80 1080 74 HOH HOH . 
F 3 HOH A 81 1081 83 HOH HOH . 
F 3 HOH A 82 1082 27 HOH HOH . 
F 3 HOH A 83 1083 132 HOH HOH . 
F 3 HOH A 84 1084 48 HOH HOH . 
F 3 HOH A 85 1085 56 HOH HOH . 
F 3 HOH A 86 1086 34 HOH HOH . 
F 3 HOH A 87 1087 98 HOH HOH . 
F 3 HOH A 88 1088 40 HOH HOH . 
F 3 HOH A 89 1089 72 HOH HOH . 
F 3 HOH A 90 1090 106 HOH HOH . 
F 3 HOH A 91 1091 29 HOH HOH . 
F 3 HOH A 92 1092 82 HOH HOH . 
F 3 HOH A 93 1093 21 HOH HOH . 
F 3 HOH A 94 1094 19 HOH HOH . 
F 3 HOH A 95 1095 17 HOH HOH . 
F 3 HOH A 96 1096 100 HOH HOH . 
F 3 HOH A 97 1097 94 HOH HOH . 
F 3 HOH A 98 1098 43 HOH HOH . 
F 3 HOH A 99 1099 36 HOH HOH . 
F 3 HOH A 100 1100 44 HOH HOH . 
F 3 HOH A 101 1101 65 HOH HOH . 
F 3 HOH A 102 1102 95 HOH HOH . 
F 3 HOH A 103 1103 13 HOH HOH . 
F 3 HOH A 104 1104 133 HOH HOH . 
F 3 HOH A 105 1105 75 HOH HOH . 
F 3 HOH A 106 1106 91 HOH HOH . 
F 3 HOH A 107 1107 66 HOH HOH . 
F 3 HOH A 108 1108 51 HOH HOH . 
F 3 HOH A 109 1109 89 HOH HOH . 
F 3 HOH A 110 1110 126 HOH HOH . 
F 3 HOH A 111 1111 37 HOH HOH . 
F 3 HOH A 112 1112 70 HOH HOH . 
F 3 HOH A 113 1113 87 HOH HOH . 
F 3 HOH A 114 1114 139 HOH HOH . 
F 3 HOH A 115 1115 113 HOH HOH . 
F 3 HOH A 116 1116 79 HOH HOH . 
F 3 HOH A 117 1117 68 HOH HOH . 
F 3 HOH A 118 1118 127 HOH HOH . 
F 3 HOH A 119 1119 116 HOH HOH . 
F 3 HOH A 120 1120 101 HOH HOH . 
F 3 HOH A 121 1121 115 HOH HOH . 
F 3 HOH A 122 1122 118 HOH HOH . 
F 3 HOH A 123 1123 88 HOH HOH . 
F 3 HOH A 124 1124 38 HOH HOH . 
F 3 HOH A 125 1125 57 HOH HOH . 
F 3 HOH A 126 1126 128 HOH HOH . 
F 3 HOH A 127 1127 119 HOH HOH . 
F 3 HOH A 128 1128 90 HOH HOH . 
F 3 HOH A 129 1129 131 HOH HOH . 
F 3 HOH A 130 1130 96 HOH HOH . 
F 3 HOH A 131 1131 110 HOH HOH . 
F 3 HOH A 132 1132 125 HOH HOH . 
F 3 HOH A 133 1133 121 HOH HOH . 
F 3 HOH A 134 1134 138 HOH HOH . 
F 3 HOH A 135 1135 86 HOH HOH . 
F 3 HOH A 136 1136 93 HOH HOH . 
F 3 HOH A 137 1137 130 HOH HOH . 
F 3 HOH A 138 1138 105 HOH HOH . 
F 3 HOH A 139 1139 120 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 2 -2.37 16.512 61.045 1 42.29 ? C1 EDO 904 A 1 
HETATM 2 O O1 EDO . . . E 2 -2.338 15.788 62.276 1 44.24 ? O1 EDO 904 A 1 
HETATM 3 C C2 EDO . . . E 2 -0.955 16.674 60.496 1 42.45 ? C2 EDO 904 A 1 
HETATM 4 O O2 EDO . . . E 2 -0.237 15.428 60.473 1 40.61 ? O2 EDO 904 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           635 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#