data_5OKU # _model_server_result.job_id 57zelfWCOyk1qXF-KZylKw _model_server_result.datetime_utc '2024-11-28 14:35:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oku # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 5OKU # _exptl.entry_id 5OKU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OKU _cell.length_a 46.9 _cell.length_b 166.609 _cell.length_c 82.175 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OKU _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 142 n n C1 C2 GOL sing 143 n n C1 H11 GOL sing 144 n n C1 H12 GOL sing 145 n n O1 HO1 GOL sing 146 n n C2 O2 GOL sing 147 n n C2 C3 GOL sing 148 n n C2 H2 GOL sing 149 n n O2 HO2 GOL sing 150 n n C3 O3 GOL sing 151 n n C3 H31 GOL sing 152 n n C3 H32 GOL sing 153 n n O3 HO3 GOL sing 154 n n # _atom_sites.entry_id 5OKU _atom_sites.fract_transf_matrix[1][1] 0.021322 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006002 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012169 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0L1 A 1 401 2 0L1 0L1 . C 3 SO4 A 1 402 1 SO4 SO4 . D 3 SO4 A 1 403 3 SO4 SO4 . E 3 SO4 A 1 404 4 SO4 SO4 . F 4 GOL A 1 405 2 GOL GOL . G 4 GOL A 1 406 3 GOL GOL . H 5 ACY A 1 407 3 ACY ACY . I 6 HOH A 1 501 67 HOH HOH . I 6 HOH A 2 502 41 HOH HOH . I 6 HOH A 3 503 56 HOH HOH . I 6 HOH A 4 504 11 HOH HOH . I 6 HOH A 5 505 78 HOH HOH . I 6 HOH A 6 506 28 HOH HOH . I 6 HOH A 7 507 32 HOH HOH . I 6 HOH A 8 508 63 HOH HOH . I 6 HOH A 9 509 81 HOH HOH . I 6 HOH A 10 510 79 HOH HOH . I 6 HOH A 11 511 16 HOH HOH . I 6 HOH A 12 512 75 HOH HOH . I 6 HOH A 13 513 5 HOH HOH . I 6 HOH A 14 514 53 HOH HOH . I 6 HOH A 15 515 52 HOH HOH . I 6 HOH A 16 516 20 HOH HOH . I 6 HOH A 17 517 19 HOH HOH . I 6 HOH A 18 518 92 HOH HOH . I 6 HOH A 19 519 14 HOH HOH . I 6 HOH A 20 520 72 HOH HOH . I 6 HOH A 21 521 61 HOH HOH . I 6 HOH A 22 522 8 HOH HOH . I 6 HOH A 23 523 51 HOH HOH . I 6 HOH A 24 524 47 HOH HOH . I 6 HOH A 25 525 90 HOH HOH . I 6 HOH A 26 526 31 HOH HOH . I 6 HOH A 27 527 50 HOH HOH . I 6 HOH A 28 528 15 HOH HOH . I 6 HOH A 29 529 80 HOH HOH . I 6 HOH A 30 530 74 HOH HOH . I 6 HOH A 31 531 26 HOH HOH . I 6 HOH A 32 532 3 HOH HOH . I 6 HOH A 33 533 33 HOH HOH . I 6 HOH A 34 534 2 HOH HOH . I 6 HOH A 35 535 69 HOH HOH . I 6 HOH A 36 536 38 HOH HOH . I 6 HOH A 37 537 57 HOH HOH . I 6 HOH A 38 538 34 HOH HOH . I 6 HOH A 39 539 60 HOH HOH . I 6 HOH A 40 540 64 HOH HOH . I 6 HOH A 41 541 37 HOH HOH . I 6 HOH A 42 542 9 HOH HOH . I 6 HOH A 43 543 23 HOH HOH . I 6 HOH A 44 544 68 HOH HOH . I 6 HOH A 45 545 12 HOH HOH . I 6 HOH A 46 546 4 HOH HOH . I 6 HOH A 47 547 58 HOH HOH . I 6 HOH A 48 548 62 HOH HOH . I 6 HOH A 49 549 40 HOH HOH . I 6 HOH A 50 550 55 HOH HOH . I 6 HOH A 51 551 85 HOH HOH . I 6 HOH A 52 552 101 HOH HOH . I 6 HOH A 53 553 22 HOH HOH . I 6 HOH A 54 554 1 HOH HOH . I 6 HOH A 55 555 29 HOH HOH . I 6 HOH A 56 556 94 HOH HOH . I 6 HOH A 57 557 86 HOH HOH . I 6 HOH A 58 558 46 HOH HOH . I 6 HOH A 59 559 77 HOH HOH . I 6 HOH A 60 560 84 HOH HOH . I 6 HOH A 61 561 96 HOH HOH . I 6 HOH A 62 562 76 HOH HOH . I 6 HOH A 63 563 30 HOH HOH . I 6 HOH A 64 564 49 HOH HOH . I 6 HOH A 65 565 17 HOH HOH . I 6 HOH A 66 566 54 HOH HOH . I 6 HOH A 67 567 13 HOH HOH . I 6 HOH A 68 568 83 HOH HOH . I 6 HOH A 69 569 89 HOH HOH . I 6 HOH A 70 570 65 HOH HOH . I 6 HOH A 71 571 91 HOH HOH . I 6 HOH A 72 572 42 HOH HOH . I 6 HOH A 73 573 95 HOH HOH . I 6 HOH A 74 574 24 HOH HOH . I 6 HOH A 75 575 70 HOH HOH . I 6 HOH A 76 576 82 HOH HOH . I 6 HOH A 77 577 48 HOH HOH . I 6 HOH A 78 578 27 HOH HOH . I 6 HOH A 79 579 66 HOH HOH . I 6 HOH A 80 580 100 HOH HOH . I 6 HOH A 81 581 7 HOH HOH . I 6 HOH A 82 582 43 HOH HOH . I 6 HOH A 83 583 25 HOH HOH . I 6 HOH A 84 584 39 HOH HOH . I 6 HOH A 85 585 71 HOH HOH . I 6 HOH A 86 586 99 HOH HOH . I 6 HOH A 87 587 88 HOH HOH . I 6 HOH A 88 588 10 HOH HOH . I 6 HOH A 89 589 36 HOH HOH . I 6 HOH A 90 590 44 HOH HOH . I 6 HOH A 91 591 6 HOH HOH . I 6 HOH A 92 592 93 HOH HOH . I 6 HOH A 93 593 87 HOH HOH . I 6 HOH A 94 594 59 HOH HOH . I 6 HOH A 95 595 97 HOH HOH . I 6 HOH A 96 596 35 HOH HOH . I 6 HOH A 97 597 21 HOH HOH . I 6 HOH A 98 598 45 HOH HOH . I 6 HOH A 99 599 98 HOH HOH . I 6 HOH A 100 600 73 HOH HOH . I 6 HOH A 101 601 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 4 72.272 369.295 84.847 1 35.83 ? C1 GOL 405 A 1 HETATM 2 O O1 GOL . . . F 4 72.373 368.935 83.466 1 31.29 ? O1 GOL 405 A 1 HETATM 3 C C2 GOL . . . F 4 72.615 368.033 85.622 1 37.13 ? C2 GOL 405 A 1 HETATM 4 O O2 GOL . . . F 4 72.264 367.002 84.726 1 34.19 ? O2 GOL 405 A 1 HETATM 5 C C3 GOL . . . F 4 71.81 367.751 86.878 1 38.16 ? C3 GOL 405 A 1 HETATM 6 O O3 GOL . . . F 4 72.333 368.381 88.055 1 45.97 ? O3 GOL 405 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 6 #