data_5OKZ # _model_server_result.job_id YUDwD1wjzwce9lu2L4J0sA _model_server_result.datetime_utc '2025-01-02 17:44:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5okz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"OA","auth_seq_id":401}' # _entry.id 5OKZ # _exptl.entry_id 5OKZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 163.215 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRIS(HYDROXYETHYL)AMINOMETHANE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.37 _cell.angle_gamma 90 _cell.entry_id 5OKZ _cell.length_a 161.779 _cell.length_b 237.43 _cell.length_c 201.895 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OKZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA decameric 10 author_and_software_defined_assembly 1 PISA decameric 10 author_and_software_defined_assembly 2 PISA decameric 10 author_and_software_defined_assembly 3 PISA decameric 10 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,FA,GA,HA,IA,JA,KA,LA,MA,NA,XA,YA,ZA,AB,UB,VB,WB,XB,YB,ZB,AC 1 1 B,C,D,E,F,G,H,I,J,K,OA,PA,QA,BB,CB,DB,EB,FB,GB,HB 2 1 L,M,N,O,P,Q,R,S,T,U,RA,SA,TA,UA,IB,JB,KB,LB,MB 3 1 V,W,X,Y,Z,AA,BA,CA,DA,EA,VA,WA,NB,OB,PB,QB,RB,SB,TB 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 11 OA N N ? 11 RA N N ? 11 VA N N ? 11 XA N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id T _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 6 _struct_conn.ptnr1_auth_asym_id S _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 3 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id T _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 69 _struct_conn.ptnr2_auth_asym_id S _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 66 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.033 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C7 H17 N O3' _chem_comp.formula_weight 163.215 _chem_comp.id TAM _chem_comp.mon_nstd_flag . _chem_comp.name TRIS(HYDROXYETHYL)AMINOMETHANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TAM sing 290 n n C C2 TAM sing 291 n n C C3 TAM sing 292 n n C N TAM sing 293 n n C1 C4 TAM sing 294 n n C1 H11 TAM sing 295 n n C1 H12 TAM sing 296 n n C2 C5 TAM sing 297 n n C2 H21 TAM sing 298 n n C2 H22 TAM sing 299 n n C3 C6 TAM sing 300 n n C3 H31 TAM sing 301 n n C3 H32 TAM sing 302 n n C4 O4 TAM sing 303 n n C4 H41 TAM sing 304 n n C4 H42 TAM sing 305 n n C5 O5 TAM sing 306 n n C5 H51 TAM sing 307 n n C5 H52 TAM sing 308 n n C6 O6 TAM sing 309 n n C6 H61 TAM sing 310 n n C6 H62 TAM sing 311 n n N HN1 TAM sing 312 n n N HN2 TAM sing 313 n n O4 HO4 TAM sing 314 n n O5 HO5 TAM sing 315 n n O6 HO6 TAM sing 316 n n # _atom_sites.entry_id 5OKZ _atom_sites.fract_transf_matrix[1][1] 0.006181 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002295 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005283 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code OA 11 TAM A 1 401 298 TAM TAM . PA 12 CL G 1 301 238 CL CL . QA 12 CL H 1 401 356 CL CL . RA 11 TAM K 1 401 298 TAM TAM . SA 13 MG O 1 301 358 MG MG . TA 12 CL R 1 401 356 CL CL . UA 12 CL R 1 402 357 CL CL . VA 11 TAM U 1 401 298 TAM TAM . WA 12 CL b 1 401 356 CL CL . XA 11 TAM e 1 401 298 TAM TAM . YA 12 CL f 1 301 245 CL CL . ZA 13 MG g 1 401 394 MG MG . AB 12 CL l 1 401 356 CL CL . BB 14 HOH A 1 501 300 HOH HOH . BB 14 HOH A 2 502 302 HOH HOH . BB 14 HOH A 3 503 299 HOH HOH . BB 14 HOH A 4 504 301 HOH HOH . CB 14 HOH B 1 301 246 HOH HOH . CB 14 HOH B 2 302 245 HOH HOH . CB 14 HOH B 3 303 252 HOH HOH . CB 14 HOH B 4 304 250 HOH HOH . CB 14 HOH B 5 305 251 HOH HOH . CB 14 HOH B 6 306 247 HOH HOH . CB 14 HOH B 7 307 249 HOH HOH . CB 14 HOH B 8 308 248 HOH HOH . CB 14 HOH B 9 309 299 HOH HOH . DB 14 HOH C 1 401 401 HOH HOH . DB 14 HOH C 2 402 397 HOH HOH . DB 14 HOH C 3 403 394 HOH HOH . DB 14 HOH C 4 404 395 HOH HOH . DB 14 HOH C 5 405 400 HOH HOH . DB 14 HOH C 6 406 396 HOH HOH . DB 14 HOH C 7 407 399 HOH HOH . DB 14 HOH C 8 408 398 HOH HOH . EB 14 HOH D 1 301 228 HOH HOH . EB 14 HOH D 2 302 225 HOH HOH . EB 14 HOH D 3 303 226 HOH HOH . EB 14 HOH D 4 304 229 HOH HOH . EB 14 HOH D 5 305 227 HOH HOH . EB 14 HOH D 6 306 224 HOH HOH . EB 14 HOH D 7 307 223 HOH HOH . FB 14 HOH E 1 301 265 HOH HOH . FB 14 HOH E 2 302 264 HOH HOH . GB 14 HOH G 1 401 240 HOH HOH . GB 14 HOH G 2 402 241 HOH HOH . GB 14 HOH G 3 403 239 HOH HOH . HB 14 HOH H 1 501 358 HOH HOH . HB 14 HOH H 2 502 357 HOH HOH . HB 14 HOH H 3 503 359 HOH HOH . IB 14 HOH L 1 301 242 HOH HOH . IB 14 HOH L 2 302 244 HOH HOH . JB 14 HOH N 1 301 224 HOH HOH . JB 14 HOH N 2 302 225 HOH HOH . KB 14 HOH O 1 401 269 HOH HOH . KB 14 HOH O 2 402 266 HOH HOH . KB 14 HOH O 3 403 270 HOH HOH . KB 14 HOH O 4 404 268 HOH HOH . KB 14 HOH O 5 405 267 HOH HOH . KB 14 HOH O 6 406 243 HOH HOH . KB 14 HOH O 7 407 272 HOH HOH . LB 14 HOH P 1 301 248 HOH HOH . LB 14 HOH P 2 302 271 HOH HOH . MB 14 HOH R 1 501 360 HOH HOH . MB 14 HOH R 2 502 361 HOH HOH . MB 14 HOH R 3 503 359 HOH HOH . NB 14 HOH U 1 501 305 HOH HOH . NB 14 HOH U 2 502 311 HOH HOH . NB 14 HOH U 3 503 309 HOH HOH . NB 14 HOH U 4 504 301 HOH HOH . NB 14 HOH U 5 505 304 HOH HOH . NB 14 HOH U 6 506 302 HOH HOH . NB 14 HOH U 7 507 300 HOH HOH . NB 14 HOH U 8 508 306 HOH HOH . NB 14 HOH U 9 509 307 HOH HOH . NB 14 HOH U 10 510 308 HOH HOH . NB 14 HOH U 11 511 310 HOH HOH . NB 14 HOH U 12 512 299 HOH HOH . NB 14 HOH U 13 513 303 HOH HOH . OB 14 HOH V 1 301 252 HOH HOH . OB 14 HOH V 2 302 255 HOH HOH . OB 14 HOH V 3 303 251 HOH HOH . OB 14 HOH V 4 304 253 HOH HOH . OB 14 HOH V 5 305 244 HOH HOH . OB 14 HOH V 6 306 250 HOH HOH . OB 14 HOH V 7 307 249 HOH HOH . OB 14 HOH V 8 308 248 HOH HOH . OB 14 HOH V 9 309 247 HOH HOH . OB 14 HOH V 10 310 246 HOH HOH . OB 14 HOH V 11 311 254 HOH HOH . OB 14 HOH V 12 312 245 HOH HOH . PB 14 HOH W 1 401 398 HOH HOH . PB 14 HOH W 2 402 396 HOH HOH . PB 14 HOH W 3 403 399 HOH HOH . PB 14 HOH W 4 404 400 HOH HOH . PB 14 HOH W 5 405 395 HOH HOH . PB 14 HOH W 6 406 397 HOH HOH . QB 14 HOH X 1 301 230 HOH HOH . QB 14 HOH X 2 302 225 HOH HOH . QB 14 HOH X 3 303 224 HOH HOH . QB 14 HOH X 4 304 228 HOH HOH . QB 14 HOH X 5 305 227 HOH HOH . QB 14 HOH X 6 306 229 HOH HOH . QB 14 HOH X 7 307 226 HOH HOH . RB 14 HOH Y 1 301 270 HOH HOH . RB 14 HOH Y 2 302 267 HOH HOH . RB 14 HOH Y 3 303 268 HOH HOH . RB 14 HOH Y 4 304 266 HOH HOH . RB 14 HOH Y 5 305 271 HOH HOH . RB 14 HOH Y 6 306 269 HOH HOH . SB 14 HOH Z 1 301 249 HOH HOH . SB 14 HOH Z 2 302 248 HOH HOH . TB 14 HOH b 1 501 358 HOH HOH . TB 14 HOH b 2 502 361 HOH HOH . TB 14 HOH b 3 503 363 HOH HOH . TB 14 HOH b 4 504 359 HOH HOH . TB 14 HOH b 5 505 364 HOH HOH . TB 14 HOH b 6 506 366 HOH HOH . TB 14 HOH b 7 507 367 HOH HOH . TB 14 HOH b 8 508 360 HOH HOH . TB 14 HOH b 9 509 357 HOH HOH . TB 14 HOH b 10 510 362 HOH HOH . TB 14 HOH b 11 511 365 HOH HOH . UB 14 HOH e 1 501 301 HOH HOH . UB 14 HOH e 2 502 302 HOH HOH . UB 14 HOH e 3 503 303 HOH HOH . UB 14 HOH e 4 504 307 HOH HOH . UB 14 HOH e 5 505 304 HOH HOH . UB 14 HOH e 6 506 300 HOH HOH . UB 14 HOH e 7 507 306 HOH HOH . UB 14 HOH e 8 508 305 HOH HOH . VB 14 HOH f 1 401 249 HOH HOH . VB 14 HOH f 2 402 246 HOH HOH . VB 14 HOH f 3 403 248 HOH HOH . VB 14 HOH f 4 404 247 HOH HOH . WB 14 HOH g 1 501 395 HOH HOH . WB 14 HOH g 2 502 399 HOH HOH . WB 14 HOH g 3 503 397 HOH HOH . WB 14 HOH g 4 504 396 HOH HOH . WB 14 HOH g 5 505 398 HOH HOH . XB 14 HOH h 1 301 225 HOH HOH . XB 14 HOH h 2 302 226 HOH HOH . XB 14 HOH h 3 303 224 HOH HOH . YB 14 HOH i 1 301 267 HOH HOH . YB 14 HOH i 2 302 266 HOH HOH . ZB 14 HOH j 1 301 248 HOH HOH . AC 14 HOH l 1 501 361 HOH HOH . AC 14 HOH l 2 502 360 HOH HOH . AC 14 HOH l 3 503 359 HOH HOH . AC 14 HOH l 4 504 363 HOH HOH . AC 14 HOH l 5 505 362 HOH HOH . AC 14 HOH l 6 506 364 HOH HOH . AC 14 HOH l 7 507 357 HOH HOH . AC 14 HOH l 8 508 358 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TAM . . . OA 11 103.742 -57.352 108.898 1 96.66 ? C TAM 401 A 1 HETATM 2 C C1 TAM . . . OA 11 103.367 -57.079 110.375 1 100 ? C1 TAM 401 A 1 HETATM 3 C C2 TAM . . . OA 11 104.898 -56.397 108.526 1 92.75 ? C2 TAM 401 A 1 HETATM 4 C C3 TAM . . . OA 11 104.166 -58.814 108.663 1 85.27 ? C3 TAM 401 A 1 HETATM 5 C C4 TAM . . . OA 11 102.181 -57.917 110.866 1 101.16 ? C4 TAM 401 A 1 HETATM 6 C C5 TAM . . . OA 11 104.831 -55.864 107.091 1 96.95 ? C5 TAM 401 A 1 HETATM 7 C C6 TAM . . . OA 11 105.618 -59.135 109.013 1 85.5 ? C6 TAM 401 A 1 HETATM 8 N N TAM . . . OA 11 102.579 -57.054 108.102 1 103.34 ? N TAM 401 A 1 HETATM 9 O O4 TAM . . . OA 11 102.072 -57.675 112.235 1 101.47 ? O4 TAM 401 A 1 HETATM 10 O O5 TAM . . . OA 11 105.008 -56.975 106.27 1 97.69 ? O5 TAM 401 A 1 HETATM 11 O O6 TAM . . . OA 11 105.902 -60.443 108.661 1 97.71 ? O6 TAM 401 A 1 # _model_server_stats.io_time_ms 134 _model_server_stats.parse_time_ms 220 _model_server_stats.create_model_time_ms 225 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 11 #