data_5OLG # _model_server_result.job_id g-kWd0QnuOKCRcb5O4NvNQ _model_server_result.datetime_utc '2024-11-16 20:31:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5olg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1204}' # _entry.id 5OLG # _exptl.entry_id 5OLG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OLG _cell.length_a 39.45 _cell.length_b 179.393 _cell.length_c 139.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OLG _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 81 A CYS 71 1_555 A SG CYS 169 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 84 A CYS 74 1_555 A SG CYS 156 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf3 A SG CYS 87 A CYS 77 1_555 A SG CYS 176 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 A SG CYS 365 A CYS 259 1_555 A SG CYS 368 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc1 A OD1 ASP 62 A ASP 52 1_555 FA NA NA . A NA 1231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc2 A OG SER 101 A SER 91 1_555 FA NA NA . A NA 1231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc3 FA NA NA . A NA 1231 1_555 GA O HOH . A HOH 1349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? metalc ? metalc4 FA NA NA . A NA 1231 1_555 GA O HOH . A HOH 1375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 90 n n C1 C10 CLR sing 91 n n C1 H11 CLR sing 92 n n C1 H12 CLR sing 93 n n C2 C3 CLR sing 94 n n C2 H21 CLR sing 95 n n C2 H22 CLR sing 96 n n C3 C4 CLR sing 97 n n C3 O1 CLR sing 98 n n C3 H3 CLR sing 99 n n C4 C5 CLR sing 100 n n C4 H41 CLR sing 101 n n C4 H42 CLR sing 102 n n C5 C6 CLR doub 103 n n C5 C10 CLR sing 104 n n C6 C7 CLR sing 105 n n C6 H6 CLR sing 106 n n C7 C8 CLR sing 107 n n C7 H71 CLR sing 108 n n C7 H72 CLR sing 109 n n C8 C9 CLR sing 110 n n C8 C14 CLR sing 111 n n C8 H8 CLR sing 112 n n C9 C10 CLR sing 113 n n C9 C11 CLR sing 114 n n C9 H9 CLR sing 115 n n C10 C19 CLR sing 116 n n C11 C12 CLR sing 117 n n C11 H111 CLR sing 118 n n C11 H112 CLR sing 119 n n C12 C13 CLR sing 120 n n C12 H121 CLR sing 121 n n C12 H122 CLR sing 122 n n C13 C14 CLR sing 123 n n C13 C17 CLR sing 124 n n C13 C18 CLR sing 125 n n C14 C15 CLR sing 126 n n C14 H14 CLR sing 127 n n C15 C16 CLR sing 128 n n C15 H151 CLR sing 129 n n C15 H152 CLR sing 130 n n C16 C17 CLR sing 131 n n C16 H161 CLR sing 132 n n C16 H162 CLR sing 133 n n C17 C20 CLR sing 134 n n C17 H17 CLR sing 135 n n C18 H181 CLR sing 136 n n C18 H182 CLR sing 137 n n C18 H183 CLR sing 138 n n C19 H191 CLR sing 139 n n C19 H192 CLR sing 140 n n C19 H193 CLR sing 141 n n C20 C21 CLR sing 142 n n C20 C22 CLR sing 143 n n C20 H20 CLR sing 144 n n C21 H211 CLR sing 145 n n C21 H212 CLR sing 146 n n C21 H213 CLR sing 147 n n C22 C23 CLR sing 148 n n C22 H221 CLR sing 149 n n C22 H222 CLR sing 150 n n C23 C24 CLR sing 151 n n C23 H231 CLR sing 152 n n C23 H232 CLR sing 153 n n C24 C25 CLR sing 154 n n C24 H241 CLR sing 155 n n C24 H242 CLR sing 156 n n C25 C26 CLR sing 157 n n C25 C27 CLR sing 158 n n C25 H25 CLR sing 159 n n C26 H261 CLR sing 160 n n C26 H262 CLR sing 161 n n C26 H263 CLR sing 162 n n C27 H271 CLR sing 163 n n C27 H272 CLR sing 164 n n C27 H273 CLR sing 165 n n O1 H1 CLR sing 166 n n # _atom_sites.entry_id 5OLG _atom_sites.fract_transf_matrix[1][1] 0.025349 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005574 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007163 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZMA A 1 1201 401 ZMA ZMA . C 3 CLR A 1 1202 402 CLR CLR . D 3 CLR A 1 1203 403 CLR CLR . E 3 CLR A 1 1204 404 CLR CLR . F 3 CLR A 1 1205 405 CLR CLR . G 4 OLA A 1 1206 406 OLA OLA . H 4 OLA A 1 1207 407 OLA OLA . I 4 OLA A 1 1208 408 OLA OLA . J 4 OLA A 1 1209 409 OLA OLA . K 4 OLA A 1 1210 410 OLA OLA . L 4 OLA A 1 1211 411 OLA OLA . M 4 OLA A 1 1212 412 OLA OLA . N 4 OLA A 1 1213 413 OLA OLA . O 4 OLA A 1 1214 414 OLA OLA . P 4 OLA A 1 1215 415 OLA OLA . Q 4 OLA A 1 1216 416 OLA OLA . R 4 OLA A 1 1217 417 OLA OLA . S 4 OLA A 1 1218 418 OLA OLA . T 4 OLA A 1 1219 419 OLA OLA . U 4 OLA A 1 1220 420 OLA OLA . V 4 OLA A 1 1221 421 OLA OLA . W 4 OLA A 1 1222 422 OLA OLA . X 5 SCN A 1 1223 423 SCN SCN . Y 5 SCN A 1 1224 424 SCN SCN . Z 5 SCN A 1 1225 425 SCN SCN . AA 5 SCN A 1 1226 426 SCN SCN . BA 6 OLC A 1 1227 427 OLC OLC . CA 6 OLC A 1 1228 428 OLC OLC . DA 6 OLC A 1 1229 429 OLC OLC . EA 7 CIT A 1 1230 430 CIT CIT . FA 8 NA A 1 1231 431 NA NA . GA 9 HOH A 1 1301 501 HOH HOH . GA 9 HOH A 2 1302 1301 HOH HOH . GA 9 HOH A 3 1303 1302 HOH HOH . GA 9 HOH A 4 1304 502 HOH HOH . GA 9 HOH A 5 1305 503 HOH HOH . GA 9 HOH A 6 1306 504 HOH HOH . GA 9 HOH A 7 1307 505 HOH HOH . GA 9 HOH A 8 1308 506 HOH HOH . GA 9 HOH A 9 1309 507 HOH HOH . GA 9 HOH A 10 1310 1303 HOH HOH . GA 9 HOH A 11 1311 1304 HOH HOH . GA 9 HOH A 12 1312 508 HOH HOH . GA 9 HOH A 13 1313 509 HOH HOH . GA 9 HOH A 14 1314 510 HOH HOH . GA 9 HOH A 15 1315 511 HOH HOH . GA 9 HOH A 16 1316 512 HOH HOH . GA 9 HOH A 17 1317 1305 HOH HOH . GA 9 HOH A 18 1318 513 HOH HOH . GA 9 HOH A 19 1319 514 HOH HOH . GA 9 HOH A 20 1320 515 HOH HOH . GA 9 HOH A 21 1321 516 HOH HOH . GA 9 HOH A 22 1322 517 HOH HOH . GA 9 HOH A 23 1323 1306 HOH HOH . GA 9 HOH A 24 1324 518 HOH HOH . GA 9 HOH A 25 1325 1307 HOH HOH . GA 9 HOH A 26 1326 519 HOH HOH . GA 9 HOH A 27 1327 520 HOH HOH . GA 9 HOH A 28 1328 521 HOH HOH . GA 9 HOH A 29 1329 522 HOH HOH . GA 9 HOH A 30 1330 1308 HOH HOH . GA 9 HOH A 31 1331 523 HOH HOH . GA 9 HOH A 32 1332 524 HOH HOH . GA 9 HOH A 33 1333 525 HOH HOH . GA 9 HOH A 34 1334 526 HOH HOH . GA 9 HOH A 35 1335 527 HOH HOH . GA 9 HOH A 36 1336 528 HOH HOH . GA 9 HOH A 37 1337 529 HOH HOH . GA 9 HOH A 38 1338 530 HOH HOH . GA 9 HOH A 39 1339 1309 HOH HOH . GA 9 HOH A 40 1340 531 HOH HOH . GA 9 HOH A 41 1341 532 HOH HOH . GA 9 HOH A 42 1342 533 HOH HOH . GA 9 HOH A 43 1343 534 HOH HOH . GA 9 HOH A 44 1344 1310 HOH HOH . GA 9 HOH A 45 1345 535 HOH HOH . GA 9 HOH A 46 1346 536 HOH HOH . GA 9 HOH A 47 1347 537 HOH HOH . GA 9 HOH A 48 1348 538 HOH HOH . GA 9 HOH A 49 1349 539 HOH HOH . GA 9 HOH A 50 1350 540 HOH HOH . GA 9 HOH A 51 1351 1311 HOH HOH . GA 9 HOH A 52 1352 541 HOH HOH . GA 9 HOH A 53 1353 542 HOH HOH . GA 9 HOH A 54 1354 543 HOH HOH . GA 9 HOH A 55 1355 544 HOH HOH . GA 9 HOH A 56 1356 545 HOH HOH . GA 9 HOH A 57 1357 546 HOH HOH . GA 9 HOH A 58 1358 547 HOH HOH . GA 9 HOH A 59 1359 1312 HOH HOH . GA 9 HOH A 60 1360 548 HOH HOH . GA 9 HOH A 61 1361 549 HOH HOH . GA 9 HOH A 62 1362 550 HOH HOH . GA 9 HOH A 63 1363 551 HOH HOH . GA 9 HOH A 64 1364 552 HOH HOH . GA 9 HOH A 65 1365 553 HOH HOH . GA 9 HOH A 66 1366 554 HOH HOH . GA 9 HOH A 67 1367 555 HOH HOH . GA 9 HOH A 68 1368 556 HOH HOH . GA 9 HOH A 69 1369 557 HOH HOH . GA 9 HOH A 70 1370 558 HOH HOH . GA 9 HOH A 71 1371 559 HOH HOH . GA 9 HOH A 72 1372 560 HOH HOH . GA 9 HOH A 73 1373 561 HOH HOH . GA 9 HOH A 74 1374 562 HOH HOH . GA 9 HOH A 75 1375 563 HOH HOH . GA 9 HOH A 76 1376 564 HOH HOH . GA 9 HOH A 77 1377 565 HOH HOH . GA 9 HOH A 78 1378 566 HOH HOH . GA 9 HOH A 79 1379 567 HOH HOH . GA 9 HOH A 80 1380 1313 HOH HOH . GA 9 HOH A 81 1381 568 HOH HOH . GA 9 HOH A 82 1382 569 HOH HOH . GA 9 HOH A 83 1383 570 HOH HOH . GA 9 HOH A 84 1384 1314 HOH HOH . GA 9 HOH A 85 1385 571 HOH HOH . GA 9 HOH A 86 1386 1315 HOH HOH . GA 9 HOH A 87 1387 1316 HOH HOH . GA 9 HOH A 88 1388 1317 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . E 3 -3.097 8.095 21.211 1 24.44 ? C1 CLR 1204 A 1 HETATM 2 C C2 CLR . . . E 3 -2.923 9.622 21.166 1 24.63 ? C2 CLR 1204 A 1 HETATM 3 C C3 CLR . . . E 3 -1.931 9.992 20.065 1 25.23 ? C3 CLR 1204 A 1 HETATM 4 C C4 CLR . . . E 3 -2.451 9.477 18.71 1 24.57 ? C4 CLR 1204 A 1 HETATM 5 C C5 CLR . . . E 3 -2.687 7.999 18.769 1 21.39 ? C5 CLR 1204 A 1 HETATM 6 C C6 CLR . . . E 3 -2.123 7.184 17.839 1 27.64 ? C6 CLR 1204 A 1 HETATM 7 C C7 CLR . . . E 3 -2.419 5.702 17.681 1 26.79 ? C7 CLR 1204 A 1 HETATM 8 C C8 CLR . . . E 3 -3.571 5.271 18.593 1 24.17 ? C8 CLR 1204 A 1 HETATM 9 C C9 CLR . . . E 3 -3.485 5.957 19.964 1 21.89 ? C9 CLR 1204 A 1 HETATM 10 C C10 CLR . . . E 3 -3.572 7.485 19.877 1 23.39 ? C10 CLR 1204 A 1 HETATM 11 C C11 CLR . . . E 3 -4.556 5.42 20.919 1 26.23 ? C11 CLR 1204 A 1 HETATM 12 C C12 CLR . . . E 3 -4.617 3.901 21.012 1 26.52 ? C12 CLR 1204 A 1 HETATM 13 C C13 CLR . . . E 3 -4.708 3.232 19.639 1 27.61 ? C13 CLR 1204 A 1 HETATM 14 C C14 CLR . . . E 3 -3.541 3.753 18.801 1 26.05 ? C14 CLR 1204 A 1 HETATM 15 C C15 CLR . . . E 3 -3.583 2.889 17.534 1 28.62 ? C15 CLR 1204 A 1 HETATM 16 C C16 CLR . . . E 3 -4.097 1.529 18.006 1 25.92 ? C16 CLR 1204 A 1 HETATM 17 C C17 CLR . . . E 3 -4.456 1.725 19.493 1 28.18 ? C17 CLR 1204 A 1 HETATM 18 C C18 CLR . . . E 3 -6.088 3.575 19.007 1 22.86 ? C18 CLR 1204 A 1 HETATM 19 C C19 CLR . . . E 3 -5.004 7.955 19.559 1 23.04 ? C19 CLR 1204 A 1 HETATM 20 C C20 CLR . . . E 3 -5.574 0.743 19.891 1 29.65 ? C20 CLR 1204 A 1 HETATM 21 C C21 CLR . . . E 3 -5.99 0.844 21.368 1 26.94 ? C21 CLR 1204 A 1 HETATM 22 C C22 CLR . . . E 3 -5.091 -0.692 19.614 1 34.69 ? C22 CLR 1204 A 1 HETATM 23 C C23 CLR . . . E 3 -6.234 -1.701 19.542 1 41.4 ? C23 CLR 1204 A 1 HETATM 24 C C24 CLR . . . E 3 -5.737 -3.057 20.029 1 52.49 ? C24 CLR 1204 A 1 HETATM 25 C C25 CLR . . . E 3 -5.123 -3.869 18.91 1 55.95 ? C25 CLR 1204 A 1 HETATM 26 C C26 CLR . . . E 3 -4.871 -5.285 19.395 1 59.64 ? C26 CLR 1204 A 1 HETATM 27 C C27 CLR . . . E 3 -6.051 -3.858 17.712 1 59.48 ? C27 CLR 1204 A 1 HETATM 28 O O1 CLR . . . E 3 -1.88 11.409 20.013 1 24.64 ? O1 CLR 1204 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 401 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #