data_5OLG # _model_server_result.job_id JLZWIb7D_a7cnttVwMNi9A _model_server_result.datetime_utc '2024-11-16 20:57:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5olg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":1226}' # _entry.id 5OLG # _exptl.entry_id 5OLG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.082 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'THIOCYANATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OLG _cell.length_a 39.45 _cell.length_b 179.393 _cell.length_c 139.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OLG _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 X N N ? 5 Y N N ? 5 Z N N ? 5 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 81 A CYS 71 1_555 A SG CYS 169 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 84 A CYS 74 1_555 A SG CYS 156 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf3 A SG CYS 87 A CYS 77 1_555 A SG CYS 176 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 A SG CYS 365 A CYS 259 1_555 A SG CYS 368 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc1 A OD1 ASP 62 A ASP 52 1_555 FA NA NA . A NA 1231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc2 A OG SER 101 A SER 91 1_555 FA NA NA . A NA 1231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc3 FA NA NA . A NA 1231 1_555 GA O HOH . A HOH 1349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? metalc ? metalc4 FA NA NA . A NA 1231 1_555 GA O HOH . A HOH 1375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? # _chem_comp.formula 'C N S -1' _chem_comp.formula_weight 58.082 _chem_comp.id SCN _chem_comp.mon_nstd_flag . _chem_comp.name 'THIOCYANATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S C SCN sing 491 n n C N SCN trip 492 n n # _atom_sites.entry_id 5OLG _atom_sites.fract_transf_matrix[1][1] 0.025349 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005574 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007163 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZMA A 1 1201 401 ZMA ZMA . C 3 CLR A 1 1202 402 CLR CLR . D 3 CLR A 1 1203 403 CLR CLR . E 3 CLR A 1 1204 404 CLR CLR . F 3 CLR A 1 1205 405 CLR CLR . G 4 OLA A 1 1206 406 OLA OLA . H 4 OLA A 1 1207 407 OLA OLA . I 4 OLA A 1 1208 408 OLA OLA . J 4 OLA A 1 1209 409 OLA OLA . K 4 OLA A 1 1210 410 OLA OLA . L 4 OLA A 1 1211 411 OLA OLA . M 4 OLA A 1 1212 412 OLA OLA . N 4 OLA A 1 1213 413 OLA OLA . O 4 OLA A 1 1214 414 OLA OLA . P 4 OLA A 1 1215 415 OLA OLA . Q 4 OLA A 1 1216 416 OLA OLA . R 4 OLA A 1 1217 417 OLA OLA . S 4 OLA A 1 1218 418 OLA OLA . T 4 OLA A 1 1219 419 OLA OLA . U 4 OLA A 1 1220 420 OLA OLA . V 4 OLA A 1 1221 421 OLA OLA . W 4 OLA A 1 1222 422 OLA OLA . X 5 SCN A 1 1223 423 SCN SCN . Y 5 SCN A 1 1224 424 SCN SCN . Z 5 SCN A 1 1225 425 SCN SCN . AA 5 SCN A 1 1226 426 SCN SCN . BA 6 OLC A 1 1227 427 OLC OLC . CA 6 OLC A 1 1228 428 OLC OLC . DA 6 OLC A 1 1229 429 OLC OLC . EA 7 CIT A 1 1230 430 CIT CIT . FA 8 NA A 1 1231 431 NA NA . GA 9 HOH A 1 1301 501 HOH HOH . GA 9 HOH A 2 1302 1301 HOH HOH . GA 9 HOH A 3 1303 1302 HOH HOH . GA 9 HOH A 4 1304 502 HOH HOH . GA 9 HOH A 5 1305 503 HOH HOH . GA 9 HOH A 6 1306 504 HOH HOH . GA 9 HOH A 7 1307 505 HOH HOH . GA 9 HOH A 8 1308 506 HOH HOH . GA 9 HOH A 9 1309 507 HOH HOH . GA 9 HOH A 10 1310 1303 HOH HOH . GA 9 HOH A 11 1311 1304 HOH HOH . GA 9 HOH A 12 1312 508 HOH HOH . GA 9 HOH A 13 1313 509 HOH HOH . GA 9 HOH A 14 1314 510 HOH HOH . GA 9 HOH A 15 1315 511 HOH HOH . GA 9 HOH A 16 1316 512 HOH HOH . GA 9 HOH A 17 1317 1305 HOH HOH . GA 9 HOH A 18 1318 513 HOH HOH . GA 9 HOH A 19 1319 514 HOH HOH . GA 9 HOH A 20 1320 515 HOH HOH . GA 9 HOH A 21 1321 516 HOH HOH . GA 9 HOH A 22 1322 517 HOH HOH . GA 9 HOH A 23 1323 1306 HOH HOH . GA 9 HOH A 24 1324 518 HOH HOH . GA 9 HOH A 25 1325 1307 HOH HOH . GA 9 HOH A 26 1326 519 HOH HOH . GA 9 HOH A 27 1327 520 HOH HOH . GA 9 HOH A 28 1328 521 HOH HOH . GA 9 HOH A 29 1329 522 HOH HOH . GA 9 HOH A 30 1330 1308 HOH HOH . GA 9 HOH A 31 1331 523 HOH HOH . GA 9 HOH A 32 1332 524 HOH HOH . GA 9 HOH A 33 1333 525 HOH HOH . GA 9 HOH A 34 1334 526 HOH HOH . GA 9 HOH A 35 1335 527 HOH HOH . GA 9 HOH A 36 1336 528 HOH HOH . GA 9 HOH A 37 1337 529 HOH HOH . GA 9 HOH A 38 1338 530 HOH HOH . GA 9 HOH A 39 1339 1309 HOH HOH . GA 9 HOH A 40 1340 531 HOH HOH . GA 9 HOH A 41 1341 532 HOH HOH . GA 9 HOH A 42 1342 533 HOH HOH . GA 9 HOH A 43 1343 534 HOH HOH . GA 9 HOH A 44 1344 1310 HOH HOH . GA 9 HOH A 45 1345 535 HOH HOH . GA 9 HOH A 46 1346 536 HOH HOH . GA 9 HOH A 47 1347 537 HOH HOH . GA 9 HOH A 48 1348 538 HOH HOH . GA 9 HOH A 49 1349 539 HOH HOH . GA 9 HOH A 50 1350 540 HOH HOH . GA 9 HOH A 51 1351 1311 HOH HOH . GA 9 HOH A 52 1352 541 HOH HOH . GA 9 HOH A 53 1353 542 HOH HOH . GA 9 HOH A 54 1354 543 HOH HOH . GA 9 HOH A 55 1355 544 HOH HOH . GA 9 HOH A 56 1356 545 HOH HOH . GA 9 HOH A 57 1357 546 HOH HOH . GA 9 HOH A 58 1358 547 HOH HOH . GA 9 HOH A 59 1359 1312 HOH HOH . GA 9 HOH A 60 1360 548 HOH HOH . GA 9 HOH A 61 1361 549 HOH HOH . GA 9 HOH A 62 1362 550 HOH HOH . GA 9 HOH A 63 1363 551 HOH HOH . GA 9 HOH A 64 1364 552 HOH HOH . GA 9 HOH A 65 1365 553 HOH HOH . GA 9 HOH A 66 1366 554 HOH HOH . GA 9 HOH A 67 1367 555 HOH HOH . GA 9 HOH A 68 1368 556 HOH HOH . GA 9 HOH A 69 1369 557 HOH HOH . GA 9 HOH A 70 1370 558 HOH HOH . GA 9 HOH A 71 1371 559 HOH HOH . GA 9 HOH A 72 1372 560 HOH HOH . GA 9 HOH A 73 1373 561 HOH HOH . GA 9 HOH A 74 1374 562 HOH HOH . GA 9 HOH A 75 1375 563 HOH HOH . GA 9 HOH A 76 1376 564 HOH HOH . GA 9 HOH A 77 1377 565 HOH HOH . GA 9 HOH A 78 1378 566 HOH HOH . GA 9 HOH A 79 1379 567 HOH HOH . GA 9 HOH A 80 1380 1313 HOH HOH . GA 9 HOH A 81 1381 568 HOH HOH . GA 9 HOH A 82 1382 569 HOH HOH . GA 9 HOH A 83 1383 570 HOH HOH . GA 9 HOH A 84 1384 1314 HOH HOH . GA 9 HOH A 85 1385 571 HOH HOH . GA 9 HOH A 86 1386 1315 HOH HOH . GA 9 HOH A 87 1387 1316 HOH HOH . GA 9 HOH A 88 1388 1317 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SCN . . . AA 5 -19.849 12.158 33.051 1 77.95 ? S SCN 1226 A 1 HETATM 2 C C SCN . . . AA 5 -18.193 12.061 32.747 1 68.61 ? C SCN 1226 A 1 HETATM 3 N N SCN . . . AA 5 -17.061 11.998 32.544 1 64.49 ? N SCN 1226 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 3 #