data_5OLV # _model_server_result.job_id Z9azyD0vpei-EQQH_F3Ogg _model_server_result.datetime_utc '2024-11-04 20:18:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5olv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1203}' # _entry.id 5OLV # _exptl.entry_id 5OLV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OLV _cell.length_a 39.429 _cell.length_b 180.774 _cell.length_c 140.903 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OLV _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 81 A CYS 71 1_555 A SG CYS 169 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf2 A SG CYS 84 A CYS 74 1_555 A SG CYS 156 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf3 A SG CYS 87 A CYS 77 1_555 A SG CYS 176 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf4 A SG CYS 365 A CYS 259 1_555 A SG CYS 368 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc1 A OD1 ASP 62 A ASP 52 1_555 C NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc2 A OG SER 101 A SER 91 1_555 C NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc3 C NA NA . A NA 1202 1_555 EA O HOH . A HOH 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc4 C NA NA . A NA 1202 1_555 EA O HOH . A HOH 1360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? metalc ? metalc5 C NA NA . A NA 1202 1_555 EA O HOH . A HOH 1378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 112 n n C1 C10 CLR sing 113 n n C1 H11 CLR sing 114 n n C1 H12 CLR sing 115 n n C2 C3 CLR sing 116 n n C2 H21 CLR sing 117 n n C2 H22 CLR sing 118 n n C3 C4 CLR sing 119 n n C3 O1 CLR sing 120 n n C3 H3 CLR sing 121 n n C4 C5 CLR sing 122 n n C4 H41 CLR sing 123 n n C4 H42 CLR sing 124 n n C5 C6 CLR doub 125 n n C5 C10 CLR sing 126 n n C6 C7 CLR sing 127 n n C6 H6 CLR sing 128 n n C7 C8 CLR sing 129 n n C7 H71 CLR sing 130 n n C7 H72 CLR sing 131 n n C8 C9 CLR sing 132 n n C8 C14 CLR sing 133 n n C8 H8 CLR sing 134 n n C9 C10 CLR sing 135 n n C9 C11 CLR sing 136 n n C9 H9 CLR sing 137 n n C10 C19 CLR sing 138 n n C11 C12 CLR sing 139 n n C11 H111 CLR sing 140 n n C11 H112 CLR sing 141 n n C12 C13 CLR sing 142 n n C12 H121 CLR sing 143 n n C12 H122 CLR sing 144 n n C13 C14 CLR sing 145 n n C13 C17 CLR sing 146 n n C13 C18 CLR sing 147 n n C14 C15 CLR sing 148 n n C14 H14 CLR sing 149 n n C15 C16 CLR sing 150 n n C15 H151 CLR sing 151 n n C15 H152 CLR sing 152 n n C16 C17 CLR sing 153 n n C16 H161 CLR sing 154 n n C16 H162 CLR sing 155 n n C17 C20 CLR sing 156 n n C17 H17 CLR sing 157 n n C18 H181 CLR sing 158 n n C18 H182 CLR sing 159 n n C18 H183 CLR sing 160 n n C19 H191 CLR sing 161 n n C19 H192 CLR sing 162 n n C19 H193 CLR sing 163 n n C20 C21 CLR sing 164 n n C20 C22 CLR sing 165 n n C20 H20 CLR sing 166 n n C21 H211 CLR sing 167 n n C21 H212 CLR sing 168 n n C21 H213 CLR sing 169 n n C22 C23 CLR sing 170 n n C22 H221 CLR sing 171 n n C22 H222 CLR sing 172 n n C23 C24 CLR sing 173 n n C23 H231 CLR sing 174 n n C23 H232 CLR sing 175 n n C24 C25 CLR sing 176 n n C24 H241 CLR sing 177 n n C24 H242 CLR sing 178 n n C25 C26 CLR sing 179 n n C25 C27 CLR sing 180 n n C25 H25 CLR sing 181 n n C26 H261 CLR sing 182 n n C26 H262 CLR sing 183 n n C26 H263 CLR sing 184 n n C27 H271 CLR sing 185 n n C27 H272 CLR sing 186 n n C27 H273 CLR sing 187 n n O1 H1 CLR sing 188 n n # _atom_sites.entry_id 5OLV _atom_sites.fract_transf_matrix[1][1] 0.025362 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005532 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007097 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9Y2 A 1 1201 400 9Y2 LIG . C 3 NA A 1 1202 200 NA NA . D 4 CLR A 1 1203 201 CLR CLR . E 4 CLR A 1 1204 202 CLR CLR . F 4 CLR A 1 1205 203 CLR CLR . G 4 CLR A 1 1206 204 CLR CLR . H 5 OLA A 1 1207 206 OLA OLA . I 5 OLA A 1 1208 208 OLA OLA . J 5 OLA A 1 1209 209 OLA OLA . K 5 OLA A 1 1210 210 OLA OLA . L 5 OLA A 1 1211 211 OLA OLA . M 5 OLA A 1 1212 213 OLA OLA . N 5 OLA A 1 1213 214 OLA OLA . O 5 OLA A 1 1214 215 OLA OLA . P 5 OLA A 1 1215 217 OLA OLA . Q 5 OLA A 1 1216 218 OLA OLA . R 5 OLA A 1 1217 219 OLA OLA . S 6 OLC A 1 1218 222 OLC OLC . T 6 OLC A 1 1219 226 OLC OLC . U 6 OLC A 1 1220 227 OLC OLC . V 6 OLC A 1 1221 228 OLC OLC . W 6 OLC A 1 1222 229 OLC OLC . X 6 OLC A 1 1223 230 OLC OLC . Y 6 OLC A 1 1224 231 OLC OLC . Z 6 OLC A 1 1225 232 OLC OLC . AA 6 OLC A 1 1226 233 OLC OLC . BA 5 OLA A 1 1227 234 OLA OLA . CA 5 OLA A 1 1228 235 OLA OLA . DA 6 OLC A 1 1229 236 OLC OLC . EA 7 HOH A 1 1301 94 HOH HOH . EA 7 HOH A 2 1302 139 HOH HOH . EA 7 HOH A 3 1303 117 HOH HOH . EA 7 HOH A 4 1304 67 HOH HOH . EA 7 HOH A 5 1305 9 HOH HOH . EA 7 HOH A 6 1306 111 HOH HOH . EA 7 HOH A 7 1307 82 HOH HOH . EA 7 HOH A 8 1308 109 HOH HOH . EA 7 HOH A 9 1309 47 HOH HOH . EA 7 HOH A 10 1310 31 HOH HOH . EA 7 HOH A 11 1311 18 HOH HOH . EA 7 HOH A 12 1312 138 HOH HOH . EA 7 HOH A 13 1313 32 HOH HOH . EA 7 HOH A 14 1314 56 HOH HOH . EA 7 HOH A 15 1315 116 HOH HOH . EA 7 HOH A 16 1316 99 HOH HOH . EA 7 HOH A 17 1317 133 HOH HOH . EA 7 HOH A 18 1318 62 HOH HOH . EA 7 HOH A 19 1319 7 HOH HOH . EA 7 HOH A 20 1320 44 HOH HOH . EA 7 HOH A 21 1321 5 HOH HOH . EA 7 HOH A 22 1322 76 HOH HOH . EA 7 HOH A 23 1323 60 HOH HOH . EA 7 HOH A 24 1324 52 HOH HOH . EA 7 HOH A 25 1325 8 HOH HOH . EA 7 HOH A 26 1326 35 HOH HOH . EA 7 HOH A 27 1327 3 HOH HOH . EA 7 HOH A 28 1328 42 HOH HOH . EA 7 HOH A 29 1329 118 HOH HOH . EA 7 HOH A 30 1330 34 HOH HOH . EA 7 HOH A 31 1331 64 HOH HOH . EA 7 HOH A 32 1332 1 HOH HOH . EA 7 HOH A 33 1333 4 HOH HOH . EA 7 HOH A 34 1334 26 HOH HOH . EA 7 HOH A 35 1335 17 HOH HOH . EA 7 HOH A 36 1336 15 HOH HOH . EA 7 HOH A 37 1337 63 HOH HOH . EA 7 HOH A 38 1338 16 HOH HOH . EA 7 HOH A 39 1339 89 HOH HOH . EA 7 HOH A 40 1340 39 HOH HOH . EA 7 HOH A 41 1341 124 HOH HOH . EA 7 HOH A 42 1342 2 HOH HOH . EA 7 HOH A 43 1343 21 HOH HOH . EA 7 HOH A 44 1344 87 HOH HOH . EA 7 HOH A 45 1345 126 HOH HOH . EA 7 HOH A 46 1346 48 HOH HOH . EA 7 HOH A 47 1347 105 HOH HOH . EA 7 HOH A 48 1348 41 HOH HOH . EA 7 HOH A 49 1349 108 HOH HOH . EA 7 HOH A 50 1350 25 HOH HOH . EA 7 HOH A 51 1351 127 HOH HOH . EA 7 HOH A 52 1352 13 HOH HOH . EA 7 HOH A 53 1353 92 HOH HOH . EA 7 HOH A 54 1354 11 HOH HOH . EA 7 HOH A 55 1355 33 HOH HOH . EA 7 HOH A 56 1356 79 HOH HOH . EA 7 HOH A 57 1357 75 HOH HOH . EA 7 HOH A 58 1358 58 HOH HOH . EA 7 HOH A 59 1359 55 HOH HOH . EA 7 HOH A 60 1360 61 HOH HOH . EA 7 HOH A 61 1361 84 HOH HOH . EA 7 HOH A 62 1362 112 HOH HOH . EA 7 HOH A 63 1363 12 HOH HOH . EA 7 HOH A 64 1364 54 HOH HOH . EA 7 HOH A 65 1365 30 HOH HOH . EA 7 HOH A 66 1366 28 HOH HOH . EA 7 HOH A 67 1367 19 HOH HOH . EA 7 HOH A 68 1368 43 HOH HOH . EA 7 HOH A 69 1369 40 HOH HOH . EA 7 HOH A 70 1370 14 HOH HOH . EA 7 HOH A 71 1371 29 HOH HOH . EA 7 HOH A 72 1372 45 HOH HOH . EA 7 HOH A 73 1373 88 HOH HOH . EA 7 HOH A 74 1374 10 HOH HOH . EA 7 HOH A 75 1375 20 HOH HOH . EA 7 HOH A 76 1376 81 HOH HOH . EA 7 HOH A 77 1377 36 HOH HOH . EA 7 HOH A 78 1378 93 HOH HOH . EA 7 HOH A 79 1379 46 HOH HOH . EA 7 HOH A 80 1380 38 HOH HOH . EA 7 HOH A 81 1381 23 HOH HOH . EA 7 HOH A 82 1382 70 HOH HOH . EA 7 HOH A 83 1383 73 HOH HOH . EA 7 HOH A 84 1384 136 HOH HOH . EA 7 HOH A 85 1385 104 HOH HOH . EA 7 HOH A 86 1386 80 HOH HOH . EA 7 HOH A 87 1387 6 HOH HOH . EA 7 HOH A 88 1388 95 HOH HOH . EA 7 HOH A 89 1389 100 HOH HOH . EA 7 HOH A 90 1390 27 HOH HOH . EA 7 HOH A 91 1391 37 HOH HOH . EA 7 HOH A 92 1392 83 HOH HOH . EA 7 HOH A 93 1393 115 HOH HOH . EA 7 HOH A 94 1394 22 HOH HOH . EA 7 HOH A 95 1395 71 HOH HOH . EA 7 HOH A 96 1396 49 HOH HOH . EA 7 HOH A 97 1397 106 HOH HOH . EA 7 HOH A 98 1398 135 HOH HOH . EA 7 HOH A 99 1399 96 HOH HOH . EA 7 HOH A 100 1400 137 HOH HOH . EA 7 HOH A 101 1401 97 HOH HOH . EA 7 HOH A 102 1402 57 HOH HOH . EA 7 HOH A 103 1403 102 HOH HOH . EA 7 HOH A 104 1404 59 HOH HOH . EA 7 HOH A 105 1405 101 HOH HOH . EA 7 HOH A 106 1406 90 HOH HOH . EA 7 HOH A 107 1407 91 HOH HOH . EA 7 HOH A 108 1408 85 HOH HOH . EA 7 HOH A 109 1409 50 HOH HOH . EA 7 HOH A 110 1410 120 HOH HOH . EA 7 HOH A 111 1411 122 HOH HOH . EA 7 HOH A 112 1412 72 HOH HOH . EA 7 HOH A 113 1413 103 HOH HOH . EA 7 HOH A 114 1414 66 HOH HOH . EA 7 HOH A 115 1415 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . D 4 -38.038 9.563 31.059 1 63.97 ? C1 CLR 1203 A 1 HETATM 2 C C2 CLR . . . D 4 -37.897 11.099 30.966 1 64.39 ? C2 CLR 1203 A 1 HETATM 3 C C3 CLR . . . D 4 -36.634 11.523 30.264 1 61.65 ? C3 CLR 1203 A 1 HETATM 4 C C4 CLR . . . D 4 -36.497 10.842 28.886 1 59.49 ? C4 CLR 1203 A 1 HETATM 5 C C5 CLR . . . D 4 -36.657 9.343 29 1 59.91 ? C5 CLR 1203 A 1 HETATM 6 C C6 CLR . . . D 4 -35.709 8.544 28.481 1 59.8 ? C6 CLR 1203 A 1 HETATM 7 C C7 CLR . . . D 4 -35.793 7.03 28.399 1 60.64 ? C7 CLR 1203 A 1 HETATM 8 C C8 CLR . . . D 4 -37.172 6.522 28.791 1 63.54 ? C8 CLR 1203 A 1 HETATM 9 C C9 CLR . . . D 4 -37.686 7.306 30.007 1 64.97 ? C9 CLR 1203 A 1 HETATM 10 C C10 CLR . . . D 4 -37.876 8.809 29.73 1 63.46 ? C10 CLR 1203 A 1 HETATM 11 C C11 CLR . . . D 4 -38.901 6.629 30.65 1 64.67 ? C11 CLR 1203 A 1 HETATM 12 C C12 CLR . . . D 4 -38.712 5.125 30.872 1 66.4 ? C12 CLR 1203 A 1 HETATM 13 C C13 CLR . . . D 4 -38.34 4.383 29.619 1 68.67 ? C13 CLR 1203 A 1 HETATM 14 C C14 CLR . . . D 4 -37.054 5.055 29.142 1 67.96 ? C14 CLR 1203 A 1 HETATM 15 C C15 CLR . . . D 4 -36.494 4.131 28.062 1 70.88 ? C15 CLR 1203 A 1 HETATM 16 C C16 CLR . . . D 4 -36.978 2.745 28.493 1 73.42 ? C16 CLR 1203 A 1 HETATM 17 C C17 CLR . . . D 4 -37.903 2.909 29.706 1 73.73 ? C17 CLR 1203 A 1 HETATM 18 C C18 CLR . . . D 4 -39.516 4.462 28.599 1 65.51 ? C18 CLR 1203 A 1 HETATM 19 C C19 CLR . . . D 4 -39.134 9.063 28.843 1 60.43 ? C19 CLR 1203 A 1 HETATM 20 C C20 CLR . . . D 4 -38.983 1.813 29.767 1 76 ? C20 CLR 1203 A 1 HETATM 21 C C21 CLR . . . D 4 -39.404 1.529 31.212 1 75.69 ? C21 CLR 1203 A 1 HETATM 22 C C22 CLR . . . D 4 -38.54 0.504 29.061 1 77.2 ? C22 CLR 1203 A 1 HETATM 23 C C23 CLR . . . D 4 -39.364 -0.748 29.414 1 78.07 ? C23 CLR 1203 A 1 HETATM 24 C C24 CLR . . . D 4 -39.62 -1.65 28.2 1 79.31 ? C24 CLR 1203 A 1 HETATM 25 C C25 CLR . . . D 4 -40.81 -2.616 28.374 1 81.08 ? C25 CLR 1203 A 1 HETATM 26 C C26 CLR . . . D 4 -40.523 -4.007 27.808 1 80.27 ? C26 CLR 1203 A 1 HETATM 27 C C27 CLR . . . D 4 -41.298 -2.728 29.82 1 81.76 ? C27 CLR 1203 A 1 HETATM 28 O O1 CLR . . . D 4 -36.633 12.95 30.105 1 61.06 ? O1 CLR 1203 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #